RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 BOLA2Q9H3K6 86 aa5.57□□□□□ -1.52
PCDH11X-204ENST00000373088 TRMT112Q9UI30 125 aaKnown RBP5.57□□□□□ -1.52
PCDH11X-204ENST00000373088 PLBD2Q8NHP8 589 aa5.57□□□□□ -1.52
PCDH11X-204ENST00000373088 FAM89AQ96GI7 184 aa5.57□□□□□ -1.52
PCDH11X-204ENST00000373088 IGKV5-2P06315 115 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 CWC27Q6UX04 472 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 CNTROBQ8N137 903 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 FSD1Q9BTV5 496 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 NCAPD2Q15021 1401 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 NBPF26B4DH59 902 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 GSPT1P15170 499 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 TPRNQ4KMQ1 711 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 NBPF14Q5TI25 921 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 NBPF10Q6P3W6 841 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 DZIP3Q86Y13 1208 aaKnown RBP5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 NBPF15Q8N660 670 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 TBC1D32Q96NH3 1257 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 ATG3Q9NT62 314 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 HEG1Q9ULI3 1381 aa5.56□□□□□ -1.52
PCDH11X-204ENST00000373088 PDIA6Q15084 440 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 SSH3Q8TE77 659 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 CNNM1Q9NRU3 951 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 ZBTB1Q9Y2K1 713 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 ADCY9O60503 1353 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 KDM6AO15550 1401 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 KCNQ2O43526 872 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 ZNF594Q96JF6 807 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 CDCA7Q9BWT1 371 aaPredicted RBP5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 CEP126Q9P2H0 1117 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 TAOK2Q9UL54 1235 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 UNC5CLQ8IV45 518 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 ECHDC1Q9NTX5 307 aa5.55□□□□□ -1.52
PCDH11X-204ENST00000373088 MED1Q15648 1581 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 FGD1P98174 961 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 EPHA10Q5JZY3 1008 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 FOXD4L5Q5VV16 416 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 FOXD4L4Q8WXT5 416 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 NAP1L2Q9ULW6 460 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 CAMTA1Q9Y6Y1 1673 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 NWD1Q149M9 1564 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 PHF14O94880 888 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 IFIT5Q13325 482 aaKnown RBP5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 COL5A2P05997 1499 aaPredicted RBP5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 ST18O60284 1047 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 NEK4P51957 841 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 FKBP4Q02790 459 aaKnown RBP eCLIP5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 TFCP2Q12800 502 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 RUFY2Q8WXA3 655 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 TBC1D2Q9BYX2 928 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 SLIT3O75094 1523 aa5.54□□□□□ -1.52
PCDH11X-204ENST00000373088 LOC102724428A0A0B4J2F2 783 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 SIK1P57059 783 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 METTL24Q5JXM2 366 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 MARCH10Q8NA82 808 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 NDUFB9Q9Y6M9 179 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 OVOS2A0A0G2JMS6 1433 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 KIF1AQ12756 1690 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 RGS12O14924 1447 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 FRAT2O75474 233 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 HCLS1P14317 486 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 HSPA1LP34931 641 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 TIMM10P62072 90 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 TCIRG1Q13488 830 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 HSP90AB3PQ58FF7 597 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 LDHAL6AQ6ZMR3 332 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 SMIM5Q71RC9 77 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 SYNE4Q8N205 404 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 CCDC191Q8NCU4 936 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 CERKQ8TCT0 537 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 MPHOSPH8Q99549 860 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 SNRKQ9NRH2 765 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 NIP7Q9Y221 180 aaKnown RBP eCLIP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 NKX1-1Q15270 411 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 HLFQ16534 295 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 SMARCC1Q92922 1105 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 UPF3BQ9BZI7 483 aaKnown RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 SPATA31A1Q5TZJ5 1347 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 IBTKQ9P2D0 1353 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 IRS4O14654 1257 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 CCDC24Q8N4L8 307 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 HELBQ8NG08 1087 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 EAF2Q96CJ1 260 aaPredicted RBP5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 CCDC87Q9NVE4 849 aa5.53□□□□□ -1.52
PCDH11X-204ENST00000373088 ZPR1O75312 459 aa5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 WASHC4Q2M389 1173 aa5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 TTC39AQ5SRH9 613 aa5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 LTN1O94822 1766 aa5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 NCLP19338 710 aaKnown RBP5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 CRKLP46109 303 aaKnown RBP5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 FOXD4L6Q3SYB3 417 aaPredicted RBP5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 FOXD4L3Q6VB84 417 aaPredicted RBP5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 DDX46Q7L014 1031 aaKnown RBP5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 EDC3Q96F86 508 aaKnown RBP5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 DBNDD2Q9BQY9 259 aa5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 QTRT2Q9H974 415 aaKnown RBP5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 ATP10DQ9P241 1426 aa5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 DLG5Q8TDM6 1919 aa5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 ANKRD18BA2A2Z9 1011 aa5.52□□□□□ -1.53
PCDH11X-204ENST00000373088 GNPATO15228 680 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms