RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 COPS6Q7L5N1 327 aa16.41■□□□□ 0.22
CSTF2-201ENST00000372972 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
CSTF2-201ENST00000372972 NUTM1Q86Y26 1132 aa16.4■□□□□ 0.22
CSTF2-201ENST00000372972 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
CSTF2-201ENST00000372972 CD2BP2O95400 341 aaKnown RBP16.4■□□□□ 0.22
CSTF2-201ENST00000372972 IGKV5-2P06315 115 aa16.39■□□□□ 0.21
CSTF2-201ENST00000372972 CHMLP26374 656 aa16.39■□□□□ 0.21
CSTF2-201ENST00000372972 DDIT3P35638 169 aa16.39■□□□□ 0.21
CSTF2-201ENST00000372972 OS9Q13438 667 aaPredicted RBP16.39■□□□□ 0.21
CSTF2-201ENST00000372972 GSE1Q14687 1217 aa16.39■□□□□ 0.21
CSTF2-201ENST00000372972 ANKRD13DQ6ZTN6 518 aa16.39■□□□□ 0.21
CSTF2-201ENST00000372972 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
CSTF2-201ENST00000372972 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
CSTF2-201ENST00000372972 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
CSTF2-201ENST00000372972 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
CSTF2-201ENST00000372972 NEURL1BA8MQ27 555 aa16.38■□□□□ 0.21
CSTF2-201ENST00000372972 ERC1Q8IUD2 1116 aa16.38■□□□□ 0.21
CSTF2-201ENST00000372972 SUCLG2Q96I99 432 aa16.38■□□□□ 0.21
CSTF2-201ENST00000372972 CIZ1Q9ULV3 898 aaPredicted RBP16.38■□□□□ 0.21
CSTF2-201ENST00000372972 TOGARAM1Q9Y4F4 1720 aa16.38■□□□□ 0.21
CSTF2-201ENST00000372972 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
CSTF2-201ENST00000372972 PI4K2BQ8TCG2 481 aa16.37■□□□□ 0.21
CSTF2-201ENST00000372972 KAZALD1Q96I82 304 aa16.37■□□□□ 0.21
CSTF2-201ENST00000372972 GLI3P10071 1580 aa16.37■□□□□ 0.21
CSTF2-201ENST00000372972 GCKRQ14397 625 aa16.37■□□□□ 0.21
CSTF2-201ENST00000372972 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
CSTF2-201ENST00000372972 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
CSTF2-201ENST00000372972 MYD88Q99836 296 aa16.37■□□□□ 0.21
CSTF2-201ENST00000372972 TUBGCP6Q96RT7 1819 aa16.36■□□□□ 0.21
CSTF2-201ENST00000372972 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
CSTF2-201ENST00000372972 BICC1Q9H694 974 aaKnown RBP16.36■□□□□ 0.21
CSTF2-201ENST00000372972 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
CSTF2-201ENST00000372972 USP42Q9H9J4 1324 aaKnown RBP16.36■□□□□ 0.21
CSTF2-201ENST00000372972 PAPPAQ13219 1627 aa16.36■□□□□ 0.21
CSTF2-201ENST00000372972 EXOC5O00471 708 aa16.35■□□□□ 0.21
CSTF2-201ENST00000372972 UBR2Q8IWV8 1755 aa16.35■□□□□ 0.21
CSTF2-201ENST00000372972 TTC41PQ6P2S7 1318 aa16.35■□□□□ 0.21
CSTF2-201ENST00000372972 TMOD3Q9NYL9 352 aa16.35■□□□□ 0.21
CSTF2-201ENST00000372972 PA2G4Q9UQ80 394 aaKnown RBP16.35■□□□□ 0.21
CSTF2-201ENST00000372972 SLIT2O94813 1529 aa16.34■□□□□ 0.21
CSTF2-201ENST00000372972 ST18O60284 1047 aa16.34■□□□□ 0.21
CSTF2-201ENST00000372972 MCM4P33991 863 aa16.34■□□□□ 0.21
CSTF2-201ENST00000372972 PIP4K2AP48426 406 aaPredicted RBP16.34■□□□□ 0.21
CSTF2-201ENST00000372972 CERKQ8TCT0 537 aa16.34■□□□□ 0.21
CSTF2-201ENST00000372972 NWD2Q9ULI1 1742 aa16.34■□□□□ 0.21
CSTF2-201ENST00000372972 KCPQ6ZWJ8 1503 aa16.34■□□□□ 0.21
CSTF2-201ENST00000372972 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
CSTF2-201ENST00000372972 JCADQ9P266 1359 aa16.34■□□□□ 0.21
CSTF2-201ENST00000372972 GLRX3O76003 335 aaKnown RBP16.33■□□□□ 0.21
CSTF2-201ENST00000372972 MCCP23508 829 aa16.33■□□□□ 0.21
CSTF2-201ENST00000372972 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.21
CSTF2-201ENST00000372972 CNTROBQ8N137 903 aa16.33■□□□□ 0.21
CSTF2-201ENST00000372972 THRAP3Q9Y2W1 955 aaKnown RBP16.33■□□□□ 0.21
CSTF2-201ENST00000372972 LAMB4A4D0S4 1761 aa16.33■□□□□ 0.2
CSTF2-201ENST00000372972 EPB41L2O43491 1005 aaKnown RBP16.33■□□□□ 0.2
CSTF2-201ENST00000372972 PLBD2Q8NHP8 589 aa16.33■□□□□ 0.2
CSTF2-201ENST00000372972 SPATA31A5Q5VU36 1347 aa16.33■□□□□ 0.2
CSTF2-201ENST00000372972 SPATA31A7Q8IWB4 1347 aa16.33■□□□□ 0.2
CSTF2-201ENST00000372972 TNS2Q63HR2 1409 aa16.32■□□□□ 0.2
CSTF2-201ENST00000372972 PTCD1O75127 700 aaKnown RBP16.32■□□□□ 0.2
CSTF2-201ENST00000372972 IFIT2P09913 472 aaKnown RBP16.32■□□□□ 0.2
CSTF2-201ENST00000372972 PIGBQ92521 554 aa16.32■□□□□ 0.2
CSTF2-201ENST00000372972 GPATCH3Q96I76 525 aa16.32■□□□□ 0.2
CSTF2-201ENST00000372972 CDCA7Q9BWT1 371 aaPredicted RBP16.32■□□□□ 0.2
CSTF2-201ENST00000372972 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
CSTF2-201ENST00000372972 ECHDC1Q9NTX5 307 aa16.31■□□□□ 0.2
CSTF2-201ENST00000372972 ITGB4P16144 1822 aa16.31■□□□□ 0.2
CSTF2-201ENST00000372972 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
CSTF2-201ENST00000372972 ANAPC15P60006 121 aa16.31■□□□□ 0.2
CSTF2-201ENST00000372972 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
CSTF2-201ENST00000372972 CCDC9Q9Y3X0 531 aaKnown RBP16.31■□□□□ 0.2
CSTF2-201ENST00000372972 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
CSTF2-201ENST00000372972 SASH1O94885 1247 aa16.3■□□□□ 0.2
CSTF2-201ENST00000372972 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
CSTF2-201ENST00000372972 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
CSTF2-201ENST00000372972 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
CSTF2-201ENST00000372972 RAB3GAP1Q15042 981 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 ASAP1Q9ULH1 1129 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 LRP6O75581 1613 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 COL15A1P39059 1388 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 DDB1Q16531 1140 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 EPHA10Q5JZY3 1008 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 AACSQ86V21 672 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 NGLY1Q96IV0 654 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 C8orf37Q96NL8 207 aa16.29■□□□□ 0.2
CSTF2-201ENST00000372972 ATP5J2-PTCD1G3V325 749 aa16.28■□□□□ 0.2
CSTF2-201ENST00000372972 TNPO1Q92973 898 aaKnown RBP16.28■□□□□ 0.2
CSTF2-201ENST00000372972 IL17RAQ96F46 866 aa16.28■□□□□ 0.2
CSTF2-201ENST00000372972 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
CSTF2-201ENST00000372972 A0A087WZG4 1122 aa16.27■□□□□ 0.2
CSTF2-201ENST00000372972 SGSM2O43147 1006 aa16.27■□□□□ 0.2
CSTF2-201ENST00000372972 BARGINQ6ZT62 677 aa16.27■□□□□ 0.2
CSTF2-201ENST00000372972 UBE3BQ7Z3V4 1068 aa16.27■□□□□ 0.2
CSTF2-201ENST00000372972 BCL9O00512 1426 aa16.27■□□□□ 0.2
CSTF2-201ENST00000372972 A1BGP04217 495 aa16.27■□□□□ 0.19
CSTF2-201ENST00000372972 NEK4P51957 841 aa16.27■□□□□ 0.19
CSTF2-201ENST00000372972 RABL6Q3YEC7 729 aaPredicted RBP16.27■□□□□ 0.19
CSTF2-201ENST00000372972 EAF2Q96CJ1 260 aaPredicted RBP16.27■□□□□ 0.19
CSTF2-201ENST00000372972 COPRSQ9NQ92 184 aa16.27■□□□□ 0.19
CSTF2-201ENST00000372972 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms