RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
TRERF1-203ENST00000372917 ELL2O00472 640 aaPredicted RBP12.46□□□□□ -0.41
TRERF1-203ENST00000372917 NEDD9Q14511 834 aa12.46□□□□□ -0.41
TRERF1-203ENST00000372917 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
TRERF1-203ENST00000372917 CLIP2Q9UDT6 1046 aa12.46□□□□□ -0.41
TRERF1-203ENST00000372917 ZRANB2O95218 330 aaKnown RBP eCLIP12.46□□□□□ -0.41
TRERF1-203ENST00000372917 CLASP1Q7Z460 1538 aa12.46□□□□□ -0.41
TRERF1-203ENST00000372917 LUZP1Q86V48 1076 aa12.46□□□□□ -0.42
TRERF1-203ENST00000372917 TEX11Q8IYF3 940 aa12.46□□□□□ -0.42
TRERF1-203ENST00000372917 ERBB3P21860 1342 aa12.46□□□□□ -0.42
TRERF1-203ENST00000372917 SPATS2LQ9NUQ6 558 aaKnown RBP12.45□□□□□ -0.42
TRERF1-203ENST00000372917 BIN2Q9UBW5 565 aaPredicted RBP12.45□□□□□ -0.42
TRERF1-203ENST00000372917 SASH3O75995 380 aa12.45□□□□□ -0.42
TRERF1-203ENST00000372917 ERCC3P19447 782 aa12.45□□□□□ -0.42
TRERF1-203ENST00000372917 GCKP35557 465 aa12.45□□□□□ -0.42
TRERF1-203ENST00000372917 BMP2KLQ5H9B9 411 aa12.45□□□□□ -0.42
TRERF1-203ENST00000372917 CCDC97Q96F63 343 aaPredicted RBP12.45□□□□□ -0.42
TRERF1-203ENST00000372917 CHMP3Q9Y3E7 222 aa12.45□□□□□ -0.42
TRERF1-203ENST00000372917 ATP2B2Q01814 1243 aa12.45□□□□□ -0.42
TRERF1-203ENST00000372917 WDR63Q8IWG1 891 aa12.45□□□□□ -0.42
TRERF1-203ENST00000372917 ERCC4Q92889 916 aaPredicted RBP12.45□□□□□ -0.42
TRERF1-203ENST00000372917 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
TRERF1-203ENST00000372917 MAGI2Q86UL8 1455 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 CCDC192P0DO97 292 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 PEX19P40855 299 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 ISM2Q6H9L7 571 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 ERC1Q8IUD2 1116 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 DZIP1LQ8IYY4 767 aaKnown RBP12.44□□□□□ -0.42
TRERF1-203ENST00000372917 PSD3Q9NYI0 1048 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 ABCC2Q92887 1545 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 SKILP12757 684 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 CCNHP51946 323 aaPredicted RBP12.44□□□□□ -0.42
TRERF1-203ENST00000372917 SF3A1Q15459 793 aaKnown RBP12.44□□□□□ -0.42
TRERF1-203ENST00000372917 USP26Q9BXU7 913 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 MKRN1Q9UHC7 482 aaKnown RBP12.44□□□□□ -0.42
TRERF1-203ENST00000372917 NAP1L1P55209 391 aaKnown RBP12.44□□□□□ -0.42
TRERF1-203ENST00000372917 WWC2Q6AWC2 1192 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 CHD1LQ86WJ1 897 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 KAT2BQ92831 832 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 EPC1Q9H2F5 836 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 ADCY10Q96PN6 1610 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 LAMC1P11047 1609 aa12.44□□□□□ -0.42
TRERF1-203ENST00000372917 FIBPO43427 364 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 ADCY2Q08462 1091 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 EFCAB2Q5VUJ9 269 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 SH3GL3Q99963 347 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 CPP00450 1065 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 TBC1D8BQ0IIM8 1120 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 CDC45O75419 566 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 MYBL2P10244 700 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 SCRN1Q12765 414 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 SNW1Q13573 536 aaKnown RBP12.43□□□□□ -0.42
TRERF1-203ENST00000372917 HOMER1Q86YM7 354 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 SUDS3Q9H7L9 328 aaPredicted RBP12.43□□□□□ -0.42
TRERF1-203ENST00000372917 ARFGAP3Q9NP61 516 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 ARID5BQ14865 1188 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 TCP11L2Q8N4U5 519 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 ORC3Q9UBD5 711 aaPredicted RBP12.43□□□□□ -0.42
TRERF1-203ENST00000372917 WDR7Q9Y4E6 1490 aa12.43□□□□□ -0.42
TRERF1-203ENST00000372917 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRERF1-203ENST00000372917 KINO60870 393 aaKnown RBP12.42□□□□□ -0.42
TRERF1-203ENST00000372917 SKAP2O75563 359 aaPredicted RBP12.42□□□□□ -0.42
TRERF1-203ENST00000372917 TBC1D8O95759 1140 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
TRERF1-203ENST00000372917 LRRC31Q6UY01 552 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
TRERF1-203ENST00000372917 SCAF11Q99590 1463 aaKnown RBP12.42□□□□□ -0.42
TRERF1-203ENST00000372917 BRD1O95696 1058 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
TRERF1-203ENST00000372917 MCM6Q14566 821 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 ODF2LQ9ULJ1 636 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 DDX19BQ9UMR2 479 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 CNPY2Q9Y2B0 182 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 KANK1Q14678 1352 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 POLD1P28340 1107 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 MTA1Q13330 715 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 NFXL1Q6ZNB6 911 aa12.42□□□□□ -0.42
TRERF1-203ENST00000372917 EME2A4GXA9 379 aaPredicted RBP12.41□□□□□ -0.42
TRERF1-203ENST00000372917 PHACTR2O75167 634 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 ECEL1O95672 775 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 CLNS1AP54105 237 aaKnown RBP12.41□□□□□ -0.42
TRERF1-203ENST00000372917 DNAJC14Q6Y2X3 702 aaPredicted RBP12.41□□□□□ -0.42
TRERF1-203ENST00000372917 TRIM74Q86UV6 250 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 TRIM73Q86UV7 250 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 ARMC2Q8NEN0 867 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 HDAC1Q13547 482 aaPredicted RBP12.41□□□□□ -0.42
TRERF1-203ENST00000372917 SNX1Q13596 522 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 RBBP5Q15291 538 aaKnown RBP12.41□□□□□ -0.42
TRERF1-203ENST00000372917 RPUSD2Q8IZ73 545 aaKnown RBP12.41□□□□□ -0.42
TRERF1-203ENST00000372917 KLHL23Q8NBE8 558 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 H3BQF6 201 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 CCAR2Q8N163 923 aaKnown RBP12.41□□□□□ -0.42
TRERF1-203ENST00000372917 CCDC26Q8TAB7 109 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 FAM200AQ8TCP9 573 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 DDX11Q96FC9 970 aa12.41□□□□□ -0.42
TRERF1-203ENST00000372917 RWDD2BP57060 319 aa12.4□□□□□ -0.42
TRERF1-203ENST00000372917 CCDC144BQ3MJ40 725 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms