RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 PLIN1O60240 522 aa16.2■□□□□ 0.18
CHCHD1-202ENST00000372837 DDNO94850 711 aaPredicted RBP16.2■□□□□ 0.18
CHCHD1-202ENST00000372837 GLIPR1L2Q4G1C9 344 aa16.2■□□□□ 0.18
CHCHD1-202ENST00000372837 HSP90AB2PQ58FF8 381 aa16.2■□□□□ 0.18
CHCHD1-202ENST00000372837 LDHDQ86WU2 507 aa16.2■□□□□ 0.18
CHCHD1-202ENST00000372837 RUNDC1Q96C34 613 aa16.2■□□□□ 0.18
CHCHD1-202ENST00000372837 MCOLN1Q9GZU1 580 aa16.2■□□□□ 0.18
CHCHD1-202ENST00000372837 USP42Q9H9J4 1324 aaKnown RBP16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 APAF1O14727 1248 aa16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 CT47B1P0C2W7 299 aaPredicted RBP16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 TM4SF1P30408 202 aa16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 CCDC27Q2M243 656 aa16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 WDR63Q8IWG1 891 aa16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 BRPF3Q9ULD4 1205 aa16.19■□□□□ 0.18
CHCHD1-202ENST00000372837 EIF5BO60841 1220 aaKnown RBP16.18■□□□□ 0.18
CHCHD1-202ENST00000372837 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
CHCHD1-202ENST00000372837 COL5A3P25940 1745 aaPredicted RBP16.17■□□□□ 0.18
CHCHD1-202ENST00000372837 SPG7Q9UQ90 795 aa16.17■□□□□ 0.18
CHCHD1-202ENST00000372837 FRAT2O75474 233 aaPredicted RBP16.16■□□□□ 0.18
CHCHD1-202ENST00000372837 TAF1DQ9H5J8 278 aaPredicted RBP16.16■□□□□ 0.18
CHCHD1-202ENST00000372837 TSKSQ9UJT2 592 aa16.16■□□□□ 0.18
CHCHD1-202ENST00000372837 C20orf194Q5TEA3 1177 aa16.15■□□□□ 0.18
CHCHD1-202ENST00000372837 CLUAP1Q96AJ1 413 aa16.15■□□□□ 0.18
CHCHD1-202ENST00000372837 ZNF831Q5JPB2 1677 aa16.14■□□□□ 0.18
CHCHD1-202ENST00000372837 IQCA1LA6NCM1 817 aa16.14■□□□□ 0.17
CHCHD1-202ENST00000372837 PHKG2P15735 406 aa16.14■□□□□ 0.17
CHCHD1-202ENST00000372837 PRPF38BQ5VTL8 546 aaKnown RBP16.14■□□□□ 0.17
CHCHD1-202ENST00000372837 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
CHCHD1-202ENST00000372837 ANTXR1Q9H6X2 564 aa16.14■□□□□ 0.17
CHCHD1-202ENST00000372837 FSD2A1L4K1 749 aa16.13■□□□□ 0.17
CHCHD1-202ENST00000372837 WWC1Q8IX03 1113 aa16.13■□□□□ 0.17
CHCHD1-202ENST00000372837 BEGAINQ9BUH8 593 aa16.13■□□□□ 0.17
CHCHD1-202ENST00000372837 NCAPD2Q15021 1401 aa16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 DICER1Q9UPY3 1922 aaKnown RBP16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 ANKRD26Q9UPS8 1709 aa16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 EAPPQ56P03 285 aaPredicted RBP16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 C2CD5Q86YS7 1000 aa16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 IFNL2Q8IZJ0 200 aa16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 L3MBTL3Q96JM7 780 aaPredicted RBP16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 ABT1Q9ULW3 272 aaKnown RBP16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 DLEC1Q9Y238 1755 aa16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 THSD7BQ9C0I4 1608 aa16.12■□□□□ 0.17
CHCHD1-202ENST00000372837 CLCN1P35523 988 aa16.11■□□□□ 0.17
CHCHD1-202ENST00000372837 TBC1D32Q96NH3 1257 aa16.11■□□□□ 0.17
CHCHD1-202ENST00000372837 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
CHCHD1-202ENST00000372837 MYH16Q9H6N6 1097 aa16.11■□□□□ 0.17
CHCHD1-202ENST00000372837 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.11■□□□□ 0.17
CHCHD1-202ENST00000372837 FLT4P35916 1363 aa16.11■□□□□ 0.17
CHCHD1-202ENST00000372837 C21orf2O43822 256 aa16.1■□□□□ 0.17
CHCHD1-202ENST00000372837 NFIXQ14938 502 aa16.1■□□□□ 0.17
CHCHD1-202ENST00000372837 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
CHCHD1-202ENST00000372837 MAP1SQ66K74 1059 aaPredicted RBP16.1■□□□□ 0.17
CHCHD1-202ENST00000372837 CAPNS2Q96L46 248 aa16.1■□□□□ 0.17
CHCHD1-202ENST00000372837 RWDD1Q9H446 243 aaPredicted RBP16.1■□□□□ 0.17
CHCHD1-202ENST00000372837 ZNF219Q9P2Y4 722 aaPredicted RBP16.1■□□□□ 0.17
CHCHD1-202ENST00000372837 H0YIN7 160 aa16.09■□□□□ 0.17
CHCHD1-202ENST00000372837 CANXP27824 592 aaKnown RBP16.09■□□□□ 0.17
CHCHD1-202ENST00000372837 DGKZQ13574 1117 aa16.09■□□□□ 0.17
CHCHD1-202ENST00000372837 CNTROBQ8N137 903 aa16.09■□□□□ 0.17
CHCHD1-202ENST00000372837 GPR101Q96P66 508 aaPredicted RBP16.09■□□□□ 0.17
CHCHD1-202ENST00000372837 GGNBP2Q9H3C7 697 aa16.09■□□□□ 0.17
CHCHD1-202ENST00000372837 RTN4Q9NQC3 1192 aaKnown RBP16.09■□□□□ 0.17
CHCHD1-202ENST00000372837 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
CHCHD1-202ENST00000372837 AFDNP55196 1824 aaKnown RBP16.08■□□□□ 0.17
CHCHD1-202ENST00000372837 MRE11P49959 708 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 CHMP5Q9NZZ3 219 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 CIZ1Q9ULV3 898 aaPredicted RBP16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 LTBP3Q9NS15 1303 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 CARMIL3Q8ND23 1372 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 LTBP1Q14766 1721 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 ADAMTSL1Q8N6G6 1762 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 SCN4AP35499 1836 aa16.08■□□□□ 0.16
CHCHD1-202ENST00000372837 GOLGA6L3A6NEY3 463 aa16.07■□□□□ 0.16
CHCHD1-202ENST00000372837 DDX11L8A8MPP1 907 aa16.07■□□□□ 0.16
CHCHD1-202ENST00000372837 FYB1O15117 783 aa16.07■□□□□ 0.16
CHCHD1-202ENST00000372837 SERPINB2P05120 415 aa16.07■□□□□ 0.16
CHCHD1-202ENST00000372837 TAOK3Q9H2K8 898 aa16.07■□□□□ 0.16
CHCHD1-202ENST00000372837 NRXN2Q9P2S2 1712 aa16.07■□□□□ 0.16
CHCHD1-202ENST00000372837 FER1L6Q2WGJ9 1857 aa16.07■□□□□ 0.16
CHCHD1-202ENST00000372837 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
CHCHD1-202ENST00000372837 ERVV-2B6SEH9 535 aa16.06■□□□□ 0.16
CHCHD1-202ENST00000372837 ZPR1O75312 459 aa16.06■□□□□ 0.16
CHCHD1-202ENST00000372837 MTHFSP49914 203 aa16.06■□□□□ 0.16
CHCHD1-202ENST00000372837 SOX10P56693 466 aa16.06■□□□□ 0.16
CHCHD1-202ENST00000372837 GRM1Q13255 1194 aa16.06■□□□□ 0.16
CHCHD1-202ENST00000372837 INTS5Q6P9B9 1019 aaKnown RBP16.06■□□□□ 0.16
CHCHD1-202ENST00000372837 PAXIP1Q6ZW49 1069 aaPredicted RBP16.06■□□□□ 0.16
CHCHD1-202ENST00000372837 KIF24Q5T7B8 1368 aa16.05■□□□□ 0.16
CHCHD1-202ENST00000372837 RRP9O43818 475 aaKnown RBP16.05■□□□□ 0.16
CHCHD1-202ENST00000372837 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
CHCHD1-202ENST00000372837 EPHX2P34913 555 aa16.05■□□□□ 0.16
CHCHD1-202ENST00000372837 ECE1P42892 770 aa16.05■□□□□ 0.16
CHCHD1-202ENST00000372837 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
CHCHD1-202ENST00000372837 HACL1Q9UJ83 578 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms