RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 CRYBG1Q9Y4K1 1723 aa23.06■■□□□ 1.28
TMEM53-202ENST00000372237 RUFY2Q8WXA3 655 aa23.05■■□□□ 1.28
TMEM53-202ENST00000372237 LIMCH1Q9UPQ0 1083 aa23.05■■□□□ 1.28
TMEM53-202ENST00000372237 RPAP1Q9BWH6 1393 aaPredicted RBP23.05■■□□□ 1.28
TMEM53-202ENST00000372237 TCHHQ07283 1943 aa23.05■■□□□ 1.28
TMEM53-202ENST00000372237 RNMTO43148 476 aaKnown RBP23.05■■□□□ 1.28
TMEM53-202ENST00000372237 GADD45BO75293 160 aaPredicted RBP23.05■■□□□ 1.28
TMEM53-202ENST00000372237 TSPY26PQ9H489 355 aa23.05■■□□□ 1.28
TMEM53-202ENST00000372237 ALDH1L1O75891 902 aa23.04■■□□□ 1.28
TMEM53-202ENST00000372237 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.04■■□□□ 1.28
TMEM53-202ENST00000372237 PHF14O94880 888 aa23.04■■□□□ 1.28
TMEM53-202ENST00000372237 GCP02774 474 aa23.04■■□□□ 1.28
TMEM53-202ENST00000372237 KRT28Q7Z3Y7 464 aa23.04■■□□□ 1.28
TMEM53-202ENST00000372237 CASTP20810 708 aaKnown RBP23.03■■□□□ 1.28
TMEM53-202ENST00000372237 RUFY3Q7L099 469 aa23.03■■□□□ 1.28
TMEM53-202ENST00000372237 GPATCH3Q96I76 525 aa23.03■■□□□ 1.28
TMEM53-202ENST00000372237 LARP6Q9BRS8 491 aaKnown RBP23.03■■□□□ 1.28
TMEM53-202ENST00000372237 ECHDC1Q9NTX5 307 aa23.03■■□□□ 1.28
TMEM53-202ENST00000372237 GIGYF1O75420 1035 aaPredicted RBP23.03■■□□□ 1.28
TMEM53-202ENST00000372237 IFIT2P09913 472 aaKnown RBP23.03■■□□□ 1.28
TMEM53-202ENST00000372237 KSR2Q6VAB6 950 aa23.03■■□□□ 1.28
TMEM53-202ENST00000372237 HDAC5Q9UQL6 1122 aa23.03■■□□□ 1.28
TMEM53-202ENST00000372237 PHRF1Q9P1Y6 1649 aaKnown RBP23.02■■□□□ 1.28
TMEM53-202ENST00000372237 OFD1O75665 1012 aa23.02■■□□□ 1.28
TMEM53-202ENST00000372237 ATF3P18847 181 aa23.02■■□□□ 1.28
TMEM53-202ENST00000372237 LMOD2Q6P5Q4 547 aa23.02■■□□□ 1.28
TMEM53-202ENST00000372237 ERC1Q8IUD2 1116 aa23.02■■□□□ 1.28
TMEM53-202ENST00000372237 NCAPD2Q15021 1401 aa23.02■■□□□ 1.28
TMEM53-202ENST00000372237 ZSCAN22P10073 491 aaPredicted RBP23.02■■□□□ 1.28
TMEM53-202ENST00000372237 PROSER3Q2NL68 480 aa23.02■■□□□ 1.28
TMEM53-202ENST00000372237 PA2G4Q9UQ80 394 aaKnown RBP23.02■■□□□ 1.28
TMEM53-202ENST00000372237 PXDNQ92626 1479 aa23.01■■□□□ 1.27
TMEM53-202ENST00000372237 CWF19L2Q2TBE0 894 aaKnown RBP23.01■■□□□ 1.27
TMEM53-202ENST00000372237 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.01■■□□□ 1.27
TMEM53-202ENST00000372237 SMC3Q9UQE7 1217 aa23.01■■□□□ 1.27
TMEM53-202ENST00000372237 STX6O43752 255 aa23■■□□□ 1.27
TMEM53-202ENST00000372237 TPM2P07951 284 aa23■■□□□ 1.27
TMEM53-202ENST00000372237 PRKCSHP14314 528 aaPredicted RBP23■■□□□ 1.27
TMEM53-202ENST00000372237 CPA1P15085 419 aa23■■□□□ 1.27
TMEM53-202ENST00000372237 SYT1P21579 422 aa23■■□□□ 1.27
TMEM53-202ENST00000372237 ARHGEF25Q86VW2 580 aa23■■□□□ 1.27
TMEM53-202ENST00000372237 TMEM87AQ8NBN3 555 aa23■■□□□ 1.27
TMEM53-202ENST00000372237 EIF2AK3Q9NZJ5 1116 aaKnown RBP23■■□□□ 1.27
TMEM53-202ENST00000372237 PTH1RQ03431 593 aa22.99■■□□□ 1.27
TMEM53-202ENST00000372237 ZNF500O60304 480 aaPredicted RBP22.99■■□□□ 1.27
TMEM53-202ENST00000372237 CCDC39Q9UFE4 941 aa22.99■■□□□ 1.27
TMEM53-202ENST00000372237 CNPY2Q9Y2B0 182 aa22.99■■□□□ 1.27
TMEM53-202ENST00000372237 ZKSCAN5Q9Y2L8 839 aa22.99■■□□□ 1.27
TMEM53-202ENST00000372237 PRAMEF22A3QJZ6 481 aa22.98■■□□□ 1.27
TMEM53-202ENST00000372237 PRPF40BQ6NWY9 871 aaKnown RBP22.98■■□□□ 1.27
TMEM53-202ENST00000372237 AACSQ86V21 672 aa22.98■■□□□ 1.27
TMEM53-202ENST00000372237 EVI5LQ96CN4 794 aa22.98■■□□□ 1.27
TMEM53-202ENST00000372237 HYPKQ9NX55 129 aa22.98■■□□□ 1.27
TMEM53-202ENST00000372237 MST1RQ04912 1400 aa22.98■■□□□ 1.27
TMEM53-202ENST00000372237 OVOS2A0A0G2JMS6 1433 aa22.98■■□□□ 1.27
TMEM53-202ENST00000372237 JAKMIP1Q96N16 626 aaKnown RBP22.98■■□□□ 1.27
TMEM53-202ENST00000372237 STRCP1A6NGW2 1772 aa22.97■■□□□ 1.27
TMEM53-202ENST00000372237 ANKRD24Q8TF21 1146 aa22.97■■□□□ 1.27
TMEM53-202ENST00000372237 PDRG1Q9NUG6 133 aa22.97■■□□□ 1.27
TMEM53-202ENST00000372237 HEG1Q9ULI3 1381 aa22.97■■□□□ 1.27
TMEM53-202ENST00000372237 ADCK5Q3MIX3 580 aa22.97■■□□□ 1.27
TMEM53-202ENST00000372237 VPS53Q5VIR6 699 aa22.97■■□□□ 1.27
TMEM53-202ENST00000372237 ATP6V1DQ9Y5K8 247 aa22.97■■□□□ 1.27
TMEM53-202ENST00000372237 SLIT3O75094 1523 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 KDM4FA0A1W2PPD8 638 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 GRM8O00222 908 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 LARGE1O95461 756 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 F13A1P00488 732 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 LINS1Q8NG48 757 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 DCCP43146 1447 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 MCM5P33992 734 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 HSP90AA2PQ14568 343 aaPredicted RBP22.96■■□□□ 1.27
TMEM53-202ENST00000372237 CCDC83Q8IWF9 413 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 CYP46A1Q9Y6A2 500 aa22.96■■□□□ 1.27
TMEM53-202ENST00000372237 DDX58O95786 925 aaKnown RBP22.95■■□□□ 1.26
TMEM53-202ENST00000372237 TRPM3Q9HCF6 1732 aaPredicted RBP22.95■■□□□ 1.26
TMEM53-202ENST00000372237 AIMP1Q12904 312 aaKnown RBP22.94■■□□□ 1.26
TMEM53-202ENST00000372237 CCDC183Q5T5S1 534 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 SUCLG2Q96I99 432 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 TM6SF1Q9BZW5 370 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 ZSWIM6Q9HCJ5 1215 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 RRP9O43818 475 aaKnown RBP22.94■■□□□ 1.26
TMEM53-202ENST00000372237 ZKSCAN1P17029 563 aaPredicted RBP22.94■■□□□ 1.26
TMEM53-202ENST00000372237 GJB2P29033 226 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 UBE2HP62256 183 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 G3BP1Q13283 466 aaKnown RBP eCLIP22.94■■□□□ 1.26
TMEM53-202ENST00000372237 TPRNQ4KMQ1 711 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 CADPS2Q86UW7 1296 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 ZSCAN31Q96LW9 406 aaPredicted RBP22.94■■□□□ 1.26
TMEM53-202ENST00000372237 CCDC171Q6TFL3 1326 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 KIF1AQ12756 1690 aa22.94■■□□□ 1.26
TMEM53-202ENST00000372237 FAM184AQ8NB25 1140 aa22.93■■□□□ 1.26
TMEM53-202ENST00000372237 DDX17Q92841 729 aaKnown RBP22.93■■□□□ 1.26
TMEM53-202ENST00000372237 BICC1Q9H694 974 aaKnown RBP22.93■■□□□ 1.26
TMEM53-202ENST00000372237 SH2B1Q9NRF2 756 aaPredicted RBP22.93■■□□□ 1.26
TMEM53-202ENST00000372237 SASH1O94885 1247 aa22.93■■□□□ 1.26
TMEM53-202ENST00000372237 NECTIN1Q15223 517 aa22.93■■□□□ 1.26
TMEM53-202ENST00000372237 KCNB2Q92953 911 aa22.93■■□□□ 1.26
TMEM53-202ENST00000372237 DDX21Q9NR30 783 aaKnown RBP eCLIP22.93■■□□□ 1.26
TMEM53-202ENST00000372237 FIBPO43427 364 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms