RNA–Protein interactions for RNA: ENST00000372017.3

SNCG-202, Transcript of synuclein gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCG, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCG-202ENST00000372017 CHPF2Q9P2E5 772 aa16.34■□□□□ 0.21
SNCG-202ENST00000372017 ERBB4Q15303 1308 aa16.34■□□□□ 0.21
SNCG-202ENST00000372017 NUP98P52948 1817 aa16.33■□□□□ 0.21
SNCG-202ENST00000372017 KIF13BQ9NQT8 1826 aa16.33■□□□□ 0.21
SNCG-202ENST00000372017 HDGFL1Q5TGJ6 251 aa16.33■□□□□ 0.2
SNCG-202ENST00000372017 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
SNCG-202ENST00000372017 DDX21Q9NR30 783 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNCG-202ENST00000372017 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
SNCG-202ENST00000372017 GPR162Q16538 588 aa16.31■□□□□ 0.2
SNCG-202ENST00000372017 CDCA7LQ96GN5 454 aa16.31■□□□□ 0.2
SNCG-202ENST00000372017 COPS6Q7L5N1 327 aa16.3■□□□□ 0.2
SNCG-202ENST00000372017 PELP1Q8IZL8 1130 aaKnown RBP16.3■□□□□ 0.2
SNCG-202ENST00000372017 PARP3Q9Y6F1 533 aa16.3■□□□□ 0.2
SNCG-202ENST00000372017 N4BP2Q86UW6 1770 aaPredicted RBP16.3■□□□□ 0.2
SNCG-202ENST00000372017 C10orf71Q711Q0 1435 aa16.29■□□□□ 0.2
SNCG-202ENST00000372017 MAP3K15Q6ZN16 1313 aa16.29■□□□□ 0.2
SNCG-202ENST00000372017 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
SNCG-202ENST00000372017 AIMP1Q12904 312 aaKnown RBP16.29■□□□□ 0.2
SNCG-202ENST00000372017 TWISTNBQ3B726 338 aaPredicted RBP16.29■□□□□ 0.2
SNCG-202ENST00000372017 NPM2Q86SE8 214 aaKnown RBP16.29■□□□□ 0.2
SNCG-202ENST00000372017 XAGE3Q8WTP9 111 aa16.29■□□□□ 0.2
SNCG-202ENST00000372017 ZBTB3Q9H5J0 574 aa16.29■□□□□ 0.2
SNCG-202ENST00000372017 VAMP4O75379 141 aa16.28■□□□□ 0.2
SNCG-202ENST00000372017 SERPINB2P05120 415 aa16.28■□□□□ 0.2
SNCG-202ENST00000372017 GOLGA2Q08379 1002 aa16.28■□□□□ 0.2
SNCG-202ENST00000372017 SLFN5Q08AF3 891 aa16.28■□□□□ 0.2
SNCG-202ENST00000372017 PHAXQ9H814 394 aaKnown RBP16.28■□□□□ 0.2
SNCG-202ENST00000372017 DBF4Q9UBU7 674 aaPredicted RBP16.28■□□□□ 0.2
SNCG-202ENST00000372017 CD2APQ9Y5K6 639 aa16.28■□□□□ 0.2
SNCG-202ENST00000372017 CARMIL3Q8ND23 1372 aa16.27■□□□□ 0.2
SNCG-202ENST00000372017 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.2
SNCG-202ENST00000372017 ERVV-1B6SEH8 477 aa16.27■□□□□ 0.2
SNCG-202ENST00000372017 CLEC4GQ6UXB4 293 aa16.27■□□□□ 0.2
SNCG-202ENST00000372017 CCDC24Q8N4L8 307 aa16.27■□□□□ 0.2
SNCG-202ENST00000372017 ANKRD36CQ5JPF3 1778 aa16.26■□□□□ 0.19
SNCG-202ENST00000372017 KIF6Q6ZMV9 814 aa16.26■□□□□ 0.19
SNCG-202ENST00000372017 TRMT2AQ8IZ69 625 aaKnown RBP16.26■□□□□ 0.19
SNCG-202ENST00000372017 PXDNLA1KZ92 1463 aa16.26■□□□□ 0.19
SNCG-202ENST00000372017 RGL2O15211 777 aa16.25■□□□□ 0.19
SNCG-202ENST00000372017 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
SNCG-202ENST00000372017 PRR5LQ6MZQ0 368 aa16.25■□□□□ 0.19
SNCG-202ENST00000372017 G2E3Q7L622 706 aa16.25■□□□□ 0.19
SNCG-202ENST00000372017 SETDB2Q96T68 719 aa16.25■□□□□ 0.19
SNCG-202ENST00000372017 MYH16Q9H6N6 1097 aa16.25■□□□□ 0.19
SNCG-202ENST00000372017 NIP7Q9Y221 180 aaKnown RBP eCLIP16.25■□□□□ 0.19
SNCG-202ENST00000372017 ARFGEF2Q9Y6D5 1785 aa16.25■□□□□ 0.19
SNCG-202ENST00000372017 UBN2Q6ZU65 1347 aa16.24■□□□□ 0.19
SNCG-202ENST00000372017 KCNA3P22001 575 aa16.24■□□□□ 0.19
SNCG-202ENST00000372017 CCDC30Q5VVM6 783 aa16.24■□□□□ 0.19
SNCG-202ENST00000372017 GIGYF2Q6Y7W6 1299 aaKnown RBP16.24■□□□□ 0.19
SNCG-202ENST00000372017 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
SNCG-202ENST00000372017 HYPKQ9NX55 129 aa16.24■□□□□ 0.19
SNCG-202ENST00000372017 ZNF652Q9Y2D9 606 aa16.24■□□□□ 0.19
SNCG-202ENST00000372017 ATP10DQ9P241 1426 aa16.24■□□□□ 0.19
SNCG-202ENST00000372017 BRCA1P38398 1863 aaKnown RBP16.24■□□□□ 0.19
SNCG-202ENST00000372017 FAM177BA6PVY3 158 aa16.23■□□□□ 0.19
SNCG-202ENST00000372017 E9PSI1 815 aa16.23■□□□□ 0.19
SNCG-202ENST00000372017 GPTP24298 496 aa16.23■□□□□ 0.19
SNCG-202ENST00000372017 HNRNPUQ00839 825 aaKnown RBP eCLIP16.23■□□□□ 0.19
SNCG-202ENST00000372017 WWC3Q9ULE0 1092 aa16.23■□□□□ 0.19
SNCG-202ENST00000372017 A0A0G2JLW4 131 aa16.22■□□□□ 0.19
SNCG-202ENST00000372017 DPEP1P16444 411 aa16.22■□□□□ 0.19
SNCG-202ENST00000372017 CHRNA5P30532 468 aa16.22■□□□□ 0.19
SNCG-202ENST00000372017 COL11A2P13942 1736 aaPredicted RBP16.22■□□□□ 0.19
SNCG-202ENST00000372017 TGFB2P61812 414 aa16.21■□□□□ 0.19
SNCG-202ENST00000372017 SUSD4Q5VX71 490 aa16.21■□□□□ 0.19
SNCG-202ENST00000372017 ANKRD13DQ6ZTN6 518 aa16.21■□□□□ 0.19
SNCG-202ENST00000372017 PLBD2Q8NHP8 589 aa16.21■□□□□ 0.19
SNCG-202ENST00000372017 ZNF428Q96B54 188 aa16.21■□□□□ 0.19
SNCG-202ENST00000372017 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
SNCG-202ENST00000372017 YBX3P16989 372 aaKnown RBP eCLIP16.2■□□□□ 0.182e-7■□□□□ 9.2
SNCG-202ENST00000372017 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
SNCG-202ENST00000372017 TNRC6CQ9HCJ0 1690 aaKnown RBP16.2■□□□□ 0.18
SNCG-202ENST00000372017 DLEC1Q9Y238 1755 aa16.2■□□□□ 0.18
SNCG-202ENST00000372017 CACNA1FO60840 1977 aa16.2■□□□□ 0.18
SNCG-202ENST00000372017 NBPF5PQ86XG9 351 aaPredicted RBP16.19■□□□□ 0.18
SNCG-202ENST00000372017 NUTM1Q86Y26 1132 aa16.19■□□□□ 0.18
SNCG-202ENST00000372017 ADCY9O60503 1353 aa16.18■□□□□ 0.18
SNCG-202ENST00000372017 ABCC12Q96J65 1359 aa16.18■□□□□ 0.18
SNCG-202ENST00000372017 NTSR2O95665 410 aa16.18■□□□□ 0.18
SNCG-202ENST00000372017 NLRP10Q86W26 655 aa16.18■□□□□ 0.18
SNCG-202ENST00000372017 SYNE4Q8N205 404 aa16.18■□□□□ 0.18
SNCG-202ENST00000372017 CNBD1Q8NA66 436 aa16.18■□□□□ 0.18
SNCG-202ENST00000372017 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
SNCG-202ENST00000372017 ATP5J2-PTCD1G3V325 749 aa16.17■□□□□ 0.18
SNCG-202ENST00000372017 ERFEQ4G0M1 354 aa16.17■□□□□ 0.18
SNCG-202ENST00000372017 BRIP1Q9BX63 1249 aa16.17■□□□□ 0.18
SNCG-202ENST00000372017 STK31Q9BXU1 1019 aa16.17■□□□□ 0.18
SNCG-202ENST00000372017 PI4KAP2A4QPH2 592 aa16.16■□□□□ 0.18
SNCG-202ENST00000372017 FLIIQ13045 1269 aa16.16■□□□□ 0.18
SNCG-202ENST00000372017 TPTE2Q6XPS3 522 aa16.16■□□□□ 0.18
SNCG-202ENST00000372017 RIC3Q7Z5B4 369 aa16.16■□□□□ 0.18
SNCG-202ENST00000372017 PI4KAP1Q8N8J0 262 aa16.16■□□□□ 0.18
SNCG-202ENST00000372017 IBTKQ9P2D0 1353 aaPredicted RBP16.15■□□□□ 0.18
SNCG-202ENST00000372017 ST5P78524 1137 aa16.15■□□□□ 0.18
SNCG-202ENST00000372017 HSP90AB3PQ58FF7 597 aa16.15■□□□□ 0.18
SNCG-202ENST00000372017 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
SNCG-202ENST00000372017 MYD88Q99836 296 aa16.15■□□□□ 0.18
SNCG-202ENST00000372017 CHMP4AQ9BY43 222 aa16.15■□□□□ 0.18
SNCG-202ENST00000372017 MAP3K2Q9Y2U5 619 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms