RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 STARD3NLO95772 234 aa14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 CYP19A1P11511 503 aaPredicted RBP14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 TRIM27P14373 513 aa14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 NUCB1Q02818 461 aa14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 ZNF827Q17R98 1081 aa14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 SMIM5Q71RC9 77 aa14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 C8orf58Q8NAV2 365 aa14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 NECTIN2Q92692 538 aa14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 TEX13AQ9BXU3 409 aaPredicted RBP14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 SMC4Q9NTJ3 1288 aa14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 IBTKQ9P2D0 1353 aaPredicted RBP14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 SIPA1L3O60292 1781 aaPredicted RBP14.14□□□□□ -0.15
TSPAN1-201ENST00000372003 CRKLP46109 303 aaKnown RBP14.13□□□□□ -0.15
TSPAN1-201ENST00000372003 EXOSC9Q06265 439 aaKnown RBP14.13□□□□□ -0.15
TSPAN1-201ENST00000372003 CLEC17AQ6ZS10 378 aa14.13□□□□□ -0.15
TSPAN1-201ENST00000372003 TSPYL6Q8N831 410 aa14.13□□□□□ -0.15
TSPAN1-201ENST00000372003 AK7Q96M32 723 aa14.13□□□□□ -0.15
TSPAN1-201ENST00000372003 ZBTB40Q9NUA8 1239 aa14.13□□□□□ -0.15
TSPAN1-201ENST00000372003 STK32BQ9NY57 414 aa14.13□□□□□ -0.15
TSPAN1-201ENST00000372003 TFCP2L1Q9NZI6 479 aa14.13□□□□□ -0.15
TSPAN1-201ENST00000372003 A1BGP04217 495 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 PIP4K2AP48426 406 aaPredicted RBP14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 RAB3GAP1Q15042 981 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 SLC15A2Q16348 729 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 BMP2KLQ5H9B9 411 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 BCL2L13Q9BXK5 485 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 PAPPAQ13219 1627 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 ESPNB1AK53 854 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 GNPATO15228 680 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 INTS5Q6P9B9 1019 aaKnown RBP14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 AKT1S1Q96B36 256 aa14.12□□□□□ -0.15
TSPAN1-201ENST00000372003 PHF14O94880 888 aa14.11□□□□□ -0.15
TSPAN1-201ENST00000372003 HSP90AA1P07900 732 aaKnown RBP14.11□□□□□ -0.15
TSPAN1-201ENST00000372003 HMGB2P26583 209 aaKnown RBP14.11□□□□□ -0.15
TSPAN1-201ENST00000372003 NAP1L5Q96NT1 182 aaPredicted RBP14.11□□□□□ -0.15
TSPAN1-201ENST00000372003 PANK2Q9BZ23 570 aa14.11□□□□□ -0.15
TSPAN1-201ENST00000372003 CCDC87Q9NVE4 849 aa14.11□□□□□ -0.15
TSPAN1-201ENST00000372003 ZNF330Q9Y3S2 320 aaPredicted RBP14.11□□□□□ -0.15
TSPAN1-201ENST00000372003 PSDA5PKW4 1024 aaPredicted RBP14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 R3HDM1Q15032 1099 aaKnown RBP14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 TWISTNBQ3B726 338 aaPredicted RBP14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 AMIGO3Q86WK7 504 aa14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 ITPRIPQ8IWB1 547 aa14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 SSH1Q8WYL5 1049 aa14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 GCC1Q96CN9 775 aa14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 ZBTB1Q9Y2K1 713 aa14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 LY75O60449 1722 aa14.1□□□□□ -0.15
TSPAN1-201ENST00000372003 TPM2P07951 284 aa14.09□□□□□ -0.15
TSPAN1-201ENST00000372003 RC3H1Q5TC82 1133 aaKnown RBP14.09□□□□□ -0.15
TSPAN1-201ENST00000372003 HDGFL1Q5TGJ6 251 aa14.09□□□□□ -0.15
TSPAN1-201ENST00000372003 RTCBQ9Y3I0 505 aaKnown RBP14.09□□□□□ -0.15
TSPAN1-201ENST00000372003 CNTNAP4Q9C0A0 1308 aa14.09□□□□□ -0.15
TSPAN1-201ENST00000372003 KDM3BQ7LBC6 1761 aa14.08□□□□□ -0.15
TSPAN1-201ENST00000372003 MYL6BP14649 208 aa14.08□□□□□ -0.15
TSPAN1-201ENST00000372003 CHD1LQ86WJ1 897 aa14.08□□□□□ -0.15
TSPAN1-201ENST00000372003 ARHGAP45Q92619 1136 aa14.08□□□□□ -0.15
TSPAN1-201ENST00000372003 TNPO1Q92973 898 aaKnown RBP14.08□□□□□ -0.15
TSPAN1-201ENST00000372003 TRIM44Q96DX7 344 aaPredicted RBP14.08□□□□□ -0.15
TSPAN1-201ENST00000372003 ARXQ96QS3 562 aa14.08□□□□□ -0.15
TSPAN1-201ENST00000372003 GZF1Q9H116 711 aaPredicted RBP14.08□□□□□ -0.15
TSPAN1-201ENST00000372003 RPS6KA4O75676 772 aa14.08□□□□□ -0.16
TSPAN1-201ENST00000372003 ANXA1P04083 346 aa14.08□□□□□ -0.16
TSPAN1-201ENST00000372003 NOB1Q9ULX3 412 aaKnown RBP14.08□□□□□ -0.16
TSPAN1-201ENST00000372003 RGPD3A6NKT7 1758 aaPredicted RBP14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 RGPD4Q7Z3J3 1758 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 UBR2Q8IWV8 1755 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 NBPF26B4DH59 902 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 GOLGA6L22H0YM25 854 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 VAMP4O75379 141 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 HOXB7P09629 217 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 CCDC173Q0VFZ6 552 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 TRAPPC3LQ5T215 181 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 NBPF10Q6P3W6 841 aaKnown RBP14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 TMEM57Q8N5G2 664 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 NBPF15Q8N660 670 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 PPP1R9BQ96SB3 815 aa14.07□□□□□ -0.16
TSPAN1-201ENST00000372003 TERF1P54274 439 aa14.06□□□□□ -0.16
TSPAN1-201ENST00000372003 SPRYD3Q8NCJ5 442 aa14.06□□□□□ -0.16
TSPAN1-201ENST00000372003 PDGFDQ9GZP0 370 aaPredicted RBP14.06□□□□□ -0.16
TSPAN1-201ENST00000372003 CHPF2Q9P2E5 772 aa14.06□□□□□ -0.16
TSPAN1-201ENST00000372003 RREB1Q92766 1687 aa14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 HSP90AA2PQ14568 343 aaPredicted RBP14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 PROSER3Q2NL68 480 aa14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 CCDC30Q5VVM6 783 aa14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 COL23A1Q86Y22 540 aaPredicted RBP14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 ARHGEF1Q92888 912 aaKnown RBP14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 PNPLA7Q6ZV29 1317 aa14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 C4BP0C0L5 1744 aa14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 TJP1Q07157 1748 aa14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 NUP188Q5SRE5 1749 aa14.05□□□□□ -0.16
TSPAN1-201ENST00000372003 SSFA2P28290 1259 aa14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 IL6STP40189 918 aaPredicted RBP14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 EIF5P55010 431 aaKnown RBP14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 PDIA6Q15084 440 aa14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 SOS1Q07889 1333 aaPredicted RBP14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 C5P01031 1676 aa14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 RFC4P35249 363 aa14.04□□□□□ -0.16
TSPAN1-201ENST00000372003 AIMP1Q12904 312 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms