RNA–Protein interactions for RNA: ENST00000371781.3

LCN1-202, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-202ENST00000371781 INTS5Q6P9B9 1019 aaKnown RBP13.79□□□□□ -0.2
LCN1-202ENST00000371781 SLC4A10Q6U841 1118 aa13.79□□□□□ -0.2
LCN1-202ENST00000371781 COPS6Q7L5N1 327 aa13.79□□□□□ -0.2
LCN1-202ENST00000371781 DNAAF4Q8WXU2 420 aa13.79□□□□□ -0.2
LCN1-202ENST00000371781 MAP3K2Q9Y2U5 619 aa13.79□□□□□ -0.2
LCN1-202ENST00000371781 SCN7AQ01118 1682 aa13.79□□□□□ -0.2
LCN1-202ENST00000371781 C4BP0C0L5 1744 aa13.78□□□□□ -0.2
LCN1-202ENST00000371781 IGHDP01880 384 aa13.78□□□□□ -0.2
LCN1-202ENST00000371781 AIMP1Q12904 312 aaKnown RBP13.78□□□□□ -0.2
LCN1-202ENST00000371781 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
LCN1-202ENST00000371781 SMARCC1Q92922 1105 aaPredicted RBP13.78□□□□□ -0.2
LCN1-202ENST00000371781 C4AP0C0L4 1744 aa13.78□□□□□ -0.2
LCN1-202ENST00000371781 IGKV5-2P06315 115 aa13.77□□□□□ -0.21
LCN1-202ENST00000371781 ATP6V1AP38606 617 aa13.77□□□□□ -0.21
LCN1-202ENST00000371781 AMIGO3Q86WK7 504 aa13.77□□□□□ -0.21
LCN1-202ENST00000371781 CCDC136Q96JN2 1154 aa13.77□□□□□ -0.21
LCN1-202ENST00000371781 BCL11BQ9C0K0 894 aaPredicted RBP13.77□□□□□ -0.21
LCN1-202ENST00000371781 CASZ1Q86V15 1759 aa13.76□□□□□ -0.21
LCN1-202ENST00000371781 CRKLP46109 303 aaKnown RBP13.76□□□□□ -0.21
LCN1-202ENST00000371781 CCT4P50991 539 aaKnown RBP13.76□□□□□ -0.21
LCN1-202ENST00000371781 SKAP1Q86WV1 359 aa13.76□□□□□ -0.21
LCN1-202ENST00000371781 SIRT2Q8IXJ6 389 aa13.76□□□□□ -0.21
LCN1-202ENST00000371781 TEX13AQ9BXU3 409 aaPredicted RBP13.76□□□□□ -0.21
LCN1-202ENST00000371781 CHMP4AQ9BY43 222 aa13.76□□□□□ -0.21
LCN1-202ENST00000371781 IBTKQ9P2D0 1353 aaPredicted RBP13.75□□□□□ -0.21
LCN1-202ENST00000371781 CWF19L2Q2TBE0 894 aaKnown RBP13.75□□□□□ -0.21
LCN1-202ENST00000371781 LRRC4BQ9NT99 713 aa13.75□□□□□ -0.21
LCN1-202ENST00000371781 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
LCN1-202ENST00000371781 NUP98P52948 1817 aa13.75□□□□□ -0.21
LCN1-202ENST00000371781 TUBGCP6Q96RT7 1819 aa13.75□□□□□ -0.21
LCN1-202ENST00000371781 CNTNAP4Q9C0A0 1308 aa13.74□□□□□ -0.21
LCN1-202ENST00000371781 STARD3NLO95772 234 aa13.74□□□□□ -0.21
LCN1-202ENST00000371781 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
LCN1-202ENST00000371781 SMIM5Q71RC9 77 aa13.74□□□□□ -0.21
LCN1-202ENST00000371781 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
LCN1-202ENST00000371781 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
LCN1-202ENST00000371781 IL6STP40189 918 aaPredicted RBP13.73□□□□□ -0.21
LCN1-202ENST00000371781 ANKRD13DQ6ZTN6 518 aa13.73□□□□□ -0.21
LCN1-202ENST00000371781 PLBD2Q8NHP8 589 aa13.73□□□□□ -0.21
LCN1-202ENST00000371781 MYD88Q99836 296 aa13.73□□□□□ -0.21
LCN1-202ENST00000371781 METTL22Q9BUU2 404 aaPredicted RBP13.73□□□□□ -0.21
LCN1-202ENST00000371781 SRCIN1Q9C0H9 1055 aa13.73□□□□□ -0.21
LCN1-202ENST00000371781 ZBTB3Q9H5J0 574 aa13.73□□□□□ -0.21
LCN1-202ENST00000371781 NEURL1BA8MQ27 555 aa13.72□□□□□ -0.21
LCN1-202ENST00000371781 DDX58O95786 925 aaKnown RBP13.72□□□□□ -0.21
LCN1-202ENST00000371781 NBPF7P0C2Y1 421 aaPredicted RBP13.72□□□□□ -0.21
LCN1-202ENST00000371781 YY1P25490 414 aa13.72□□□□□ -0.21
LCN1-202ENST00000371781 AAMPQ13685 434 aa13.72□□□□□ -0.21
LCN1-202ENST00000371781 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
LCN1-202ENST00000371781 LINS1Q8NG48 757 aa13.72□□□□□ -0.21
LCN1-202ENST00000371781 CCNL1Q9UK58 526 aaPredicted RBP13.72□□□□□ -0.21
LCN1-202ENST00000371781 COL15A1P39059 1388 aa13.71□□□□□ -0.21
LCN1-202ENST00000371781 UTYO14607 1347 aa13.71□□□□□ -0.21
LCN1-202ENST00000371781 MAP3K15Q6ZN16 1313 aa13.71□□□□□ -0.21
LCN1-202ENST00000371781 ALDH1L1O75891 902 aa13.71□□□□□ -0.21
LCN1-202ENST00000371781 HLFQ16534 295 aa13.71□□□□□ -0.21
LCN1-202ENST00000371781 CEP85Q6P2H3 762 aa13.71□□□□□ -0.21
LCN1-202ENST00000371781 PROM2Q8N271 834 aa13.71□□□□□ -0.21
LCN1-202ENST00000371781 KAZALD1Q96I82 304 aa13.71□□□□□ -0.21
LCN1-202ENST00000371781 COL24A1Q17RW2 1714 aa13.7□□□□□ -0.22
LCN1-202ENST00000371781 ATP5J2-PTCD1G3V325 749 aa13.7□□□□□ -0.22
LCN1-202ENST00000371781 CASP7P55210 303 aa13.7□□□□□ -0.22
LCN1-202ENST00000371781 HDAC1Q13547 482 aaPredicted RBP13.7□□□□□ -0.22
LCN1-202ENST00000371781 ISCA1Q9BUE6 129 aa13.7□□□□□ -0.22
LCN1-202ENST00000371781 SPON1Q9HCB6 807 aa13.7□□□□□ -0.22
LCN1-202ENST00000371781 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
LCN1-202ENST00000371781 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
LCN1-202ENST00000371781 LRRFIP2Q9Y608 721 aaKnown RBP13.7□□□□□ -0.22
LCN1-202ENST00000371781 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
LCN1-202ENST00000371781 GCKRQ14397 625 aa13.69□□□□□ -0.22
LCN1-202ENST00000371781 CENPQQ7L2Z9 268 aaPredicted RBP13.69□□□□□ -0.22
LCN1-202ENST00000371781 ANKRD44Q8N8A2 993 aa13.69□□□□□ -0.22
LCN1-202ENST00000371781 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
LCN1-202ENST00000371781 UBN2Q6ZU65 1347 aa13.68□□□□□ -0.22
LCN1-202ENST00000371781 SUCLG2Q96I99 432 aa13.68□□□□□ -0.22
LCN1-202ENST00000371781 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
LCN1-202ENST00000371781 LAMB2P55268 1798 aa13.68□□□□□ -0.22
LCN1-202ENST00000371781 PNMA6EA0A0J9YXQ4 647 aa13.67□□□□□ -0.22
LCN1-202ENST00000371781 GRM8O00222 908 aa13.67□□□□□ -0.22
LCN1-202ENST00000371781 EPHA10Q5JZY3 1008 aa13.67□□□□□ -0.22
LCN1-202ENST00000371781 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
LCN1-202ENST00000371781 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
LCN1-202ENST00000371781 DZIP3Q86Y13 1208 aaKnown RBP13.67□□□□□ -0.22
LCN1-202ENST00000371781 JARID2Q92833 1246 aaPredicted RBP13.67□□□□□ -0.22
LCN1-202ENST00000371781 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
LCN1-202ENST00000371781 DDX60Q8IY21 1712 aaKnown RBP13.67□□□□□ -0.22
LCN1-202ENST00000371781 GNAI2P04899 355 aa13.66□□□□□ -0.22
LCN1-202ENST00000371781 GNAI3P08754 354 aa13.66□□□□□ -0.22
LCN1-202ENST00000371781 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
LCN1-202ENST00000371781 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
LCN1-202ENST00000371781 TXNRD1Q16881 649 aa13.66□□□□□ -0.22
LCN1-202ENST00000371781 KIF6Q6ZMV9 814 aa13.66□□□□□ -0.22
LCN1-202ENST00000371781 SMC5Q8IY18 1101 aa13.66□□□□□ -0.22
LCN1-202ENST00000371781 PDGFDQ9GZP0 370 aaPredicted RBP13.66□□□□□ -0.22
LCN1-202ENST00000371781 PLSCR1O15162 318 aa13.65□□□□□ -0.22
LCN1-202ENST00000371781 RPS6KA4O75676 772 aa13.65□□□□□ -0.22
LCN1-202ENST00000371781 ZNF827Q17R98 1081 aa13.65□□□□□ -0.22
LCN1-202ENST00000371781 COL4A1P02462 1669 aa13.64□□□□□ -0.23
LCN1-202ENST00000371781 ERVV-1B6SEH8 477 aa13.64□□□□□ -0.23
LCN1-202ENST00000371781 GNPATO15228 680 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms