RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ORAI2Q96SN7 254 aa17.25■□□□□ 0.35
NDC1-201ENST00000371429 CTTNBP2Q8WZ74 1663 aa17.25■□□□□ 0.35
NDC1-201ENST00000371429 ALDH1L1O75891 902 aa17.25■□□□□ 0.35
NDC1-201ENST00000371429 ARHGAP45Q92619 1136 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 ASXL1Q8IXJ9 1541 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 CHMP4BP1P59074 171 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
NDC1-201ENST00000371429 GRM8O00222 908 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 RDXP35241 583 aaKnown RBP17.24■□□□□ 0.35
NDC1-201ENST00000371429 PDE4BQ07343 736 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 CATIPQ7Z7H3 387 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 CUL5Q93034 780 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 MAP3K19Q56UN5 1328 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 ATP2B3Q16720 1220 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 CAGE1Q8TC20 777 aa17.24■□□□□ 0.35
NDC1-201ENST00000371429 ABCC1P33527 1531 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 POLD1P28340 1107 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 HOXC9P31274 260 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.35
NDC1-201ENST00000371429 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 TSPY2A6NKD2 308 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 IBSPP21815 317 aaPredicted RBP17.23■□□□□ 0.35
NDC1-201ENST00000371429 C8orf58Q8NAV2 365 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 RHPN1Q8TCX5 695 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 CCDC39Q9UFE4 941 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 MEIS3Q99687 375 aa17.23■□□□□ 0.35
NDC1-201ENST00000371429 PCDH11XQ9BZA7 1347 aa17.22■□□□□ 0.35
NDC1-201ENST00000371429 PCDH11YQ9BZA8 1340 aa17.22■□□□□ 0.35
NDC1-201ENST00000371429 SH2B1Q9NRF2 756 aaPredicted RBP17.22■□□□□ 0.35
NDC1-201ENST00000371429 CIZ1Q9ULV3 898 aaPredicted RBP17.22■□□□□ 0.35
NDC1-201ENST00000371429 GOLGA8AA7E2F4 631 aa17.22■□□□□ 0.35
NDC1-201ENST00000371429 GOLGA8BA8MQT2 603 aa17.22■□□□□ 0.35
NDC1-201ENST00000371429 GSTO1P78417 241 aa17.22■□□□□ 0.35
NDC1-201ENST00000371429 OGFOD1Q8N543 542 aa17.22■□□□□ 0.35
NDC1-201ENST00000371429 IQSEC3Q9UPP2 1182 aaPredicted RBP17.22■□□□□ 0.35
NDC1-201ENST00000371429 PPFIBP1Q86W92 1011 aa17.22■□□□□ 0.35
NDC1-201ENST00000371429 CRNKL1Q9BZJ0 848 aaKnown RBP17.22■□□□□ 0.35
NDC1-201ENST00000371429 PARP3Q9Y6F1 533 aa17.22■□□□□ 0.35
NDC1-201ENST00000371429 RUFY1Q96T51 708 aa17.21■□□□□ 0.35
NDC1-201ENST00000371429 CDCA7Q9BWT1 371 aaPredicted RBP17.21■□□□□ 0.35
NDC1-201ENST00000371429 SHANK2Q9UPX8 1470 aa17.21■□□□□ 0.35
NDC1-201ENST00000371429 TESK2Q96S53 571 aa17.21■□□□□ 0.35
NDC1-201ENST00000371429 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
NDC1-201ENST00000371429 LINS1Q8NG48 757 aa17.21■□□□□ 0.34
NDC1-201ENST00000371429 LUC7LQ9NQ29 371 aaKnown RBP17.21■□□□□ 0.34
NDC1-201ENST00000371429 DEF6Q9H4E7 631 aa17.2■□□□□ 0.34
NDC1-201ENST00000371429 HDAC9Q9UKV0 1011 aa17.2■□□□□ 0.34
NDC1-201ENST00000371429 CCDC194A0A1B0GVG4 234 aa17.2■□□□□ 0.34
NDC1-201ENST00000371429 HAND2P61296 217 aa17.2■□□□□ 0.34
NDC1-201ENST00000371429 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
NDC1-201ENST00000371429 A0A1W2PP64 1363 aa17.2■□□□□ 0.34
NDC1-201ENST00000371429 MFSD6Q6ZSS7 791 aa17.2■□□□□ 0.34
NDC1-201ENST00000371429 NUP62CLQ9H1M0 184 aa17.2■□□□□ 0.34
NDC1-201ENST00000371429 HMGN5P82970 282 aaKnown RBP17.2■□□□□ 0.34
NDC1-201ENST00000371429 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
NDC1-201ENST00000371429 SLC4A8Q2Y0W8 1093 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 ZGPATQ8N5A5 531 aaKnown RBP17.19■□□□□ 0.34
NDC1-201ENST00000371429 ZC3H12CQ9C0D7 883 aaKnown RBP17.19■□□□□ 0.34
NDC1-201ENST00000371429 WWC3Q9ULE0 1092 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 TSHZ3Q63HK5 1081 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 RAB34Q9BZG1 259 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 F8W031 263 aaPredicted RBP17.19■□□□□ 0.34
NDC1-201ENST00000371429 KIF5BP33176 963 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 NLRP5P59047 1200 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 DISP1Q96F81 1524 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 SSRP1Q08945 709 aaKnown RBP17.19■□□□□ 0.34
NDC1-201ENST00000371429 TMEM67Q5HYA8 995 aa17.19■□□□□ 0.34
NDC1-201ENST00000371429 SLAIN2Q9P270 581 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 NSFL1CQ9UNZ2 370 aaKnown RBP17.18■□□□□ 0.34
NDC1-201ENST00000371429 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
NDC1-201ENST00000371429 DHX8Q14562 1220 aaKnown RBP17.18■□□□□ 0.34
NDC1-201ENST00000371429 KAT14Q9H8E8 782 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 LIMCH1Q9UPQ0 1083 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 CYP7A1P22680 504 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 GUCY1B3Q02153 619 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 POLR3AO14802 1390 aaPredicted RBP17.18■□□□□ 0.34
NDC1-201ENST00000371429 GNPATO15228 680 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 CCT2P78371 535 aaKnown RBP17.18■□□□□ 0.34
NDC1-201ENST00000371429 FAM43AQ8N2R8 423 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 CARD14Q9BXL6 1004 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
NDC1-201ENST00000371429 ARGLU1Q9NWB6 273 aaPredicted RBP17.18■□□□□ 0.34
NDC1-201ENST00000371429 RNMTO43148 476 aaKnown RBP17.17■□□□□ 0.34
NDC1-201ENST00000371429 CDR1P51861 262 aa17.17■□□□□ 0.34
NDC1-201ENST00000371429 EHMT1Q9H9B1 1298 aa17.17■□□□□ 0.34
NDC1-201ENST00000371429 NOM1Q5C9Z4 860 aaKnown RBP17.17■□□□□ 0.34
NDC1-201ENST00000371429 STX8Q9UNK0 236 aa17.17■□□□□ 0.34
NDC1-201ENST00000371429 PPP4R3AQ6IN85 833 aa17.17■□□□□ 0.34
NDC1-201ENST00000371429 SPC24Q8NBT2 197 aa17.17■□□□□ 0.34
NDC1-201ENST00000371429 ZFYP08048 801 aaPredicted RBP17.17■□□□□ 0.34
NDC1-201ENST00000371429 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
NDC1-201ENST00000371429 IRS4O14654 1257 aaPredicted RBP17.16■□□□□ 0.34
NDC1-201ENST00000371429 TRAPPC3LQ5T215 181 aa17.16■□□□□ 0.34
NDC1-201ENST00000371429 CCP110O43303 1012 aa17.16■□□□□ 0.34
NDC1-201ENST00000371429 TMEM266Q2M3C6 531 aa17.16■□□□□ 0.34
NDC1-201ENST00000371429 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.16■□□□□ 0.34
NDC1-201ENST00000371429 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms