RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 KIF14Q15058 1648 aa19.85■□□□□ 0.77
PTP4A1-201ENST00000370651 TIGD1Q96MW7 591 aa19.85■□□□□ 0.77
PTP4A1-201ENST00000370651 ZNF213O14771 459 aa19.85■□□□□ 0.77
PTP4A1-201ENST00000370651 PROSER2Q86WR7 435 aaPredicted RBP19.85■□□□□ 0.77
PTP4A1-201ENST00000370651 FKBP15Q5T1M5 1219 aa19.85■□□□□ 0.77
PTP4A1-201ENST00000370651 FAM107BQ9H098 131 aa19.85■□□□□ 0.77
PTP4A1-201ENST00000370651 YEATS4O95619 227 aa19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 LMAN1P49257 510 aa19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 ATP2B2Q01814 1243 aa19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 RHPN1Q8TCX5 695 aa19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 PHAXQ9H814 394 aaKnown RBP19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 STRN4Q9NRL3 753 aa19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 F13A1P00488 732 aa19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 NAPBQ9H115 298 aa19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 C14orf93Q9H972 538 aaKnown RBP19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 TOM1L2Q6ZVM7 507 aa19.84■□□□□ 0.77
PTP4A1-201ENST00000370651 PAFAH1B1P43034 410 aa19.83■□□□□ 0.77
PTP4A1-201ENST00000370651 DACT1Q9NYF0 836 aa19.83■□□□□ 0.77
PTP4A1-201ENST00000370651 FBXO3Q9UK99 471 aa19.83■□□□□ 0.77
PTP4A1-201ENST00000370651 GIMAP7Q8NHV1 300 aa19.83■□□□□ 0.77
PTP4A1-201ENST00000370651 NOS1P29475 1434 aa19.83■□□□□ 0.77
PTP4A1-201ENST00000370651 DHX37Q8IY37 1157 aaKnown RBP19.83■□□□□ 0.76
PTP4A1-201ENST00000370651 MRPL50Q8N5N7 158 aaKnown RBP19.83■□□□□ 0.76
PTP4A1-201ENST00000370651 SEPT11Q9NVA2 429 aaKnown RBP19.83■□□□□ 0.76
PTP4A1-201ENST00000370651 USP16Q9Y5T5 823 aa19.83■□□□□ 0.76
PTP4A1-201ENST00000370651 CCDC94Q9BW85 323 aaPredicted RBP19.83■□□□□ 0.76
PTP4A1-201ENST00000370651 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.83■□□□□ 0.76
PTP4A1-201ENST00000370651 ORC3Q9UBD5 711 aaPredicted RBP19.83■□□□□ 0.76
PTP4A1-201ENST00000370651 POLR3AO14802 1390 aaPredicted RBP19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 SLC12A7Q9Y666 1083 aa19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 POLR3DP05423 398 aaPredicted RBP19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 C16orf71Q8IYS4 520 aaPredicted RBP19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 CCDC82Q8N4S0 544 aa19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 DNM1Q05193 864 aaKnown RBP19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 ZRSR2Q15696 482 aaKnown RBP19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 KCNH5Q8NCM2 988 aa19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 CCDC12Q8WUD4 166 aaPredicted RBP19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 HYPKQ9NX55 129 aa19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 USO1O60763 962 aaKnown RBP19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 ZGPATQ8N5A5 531 aaKnown RBP19.82■□□□□ 0.76
PTP4A1-201ENST00000370651 PIK3R4Q99570 1358 aa19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 GOLGA8AA7E2F4 631 aa19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 WASLO00401 505 aaPredicted RBP19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 ISM2Q6H9L7 571 aa19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 CCDC102BQ68D86 513 aa19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 ZBTB40Q9NUA8 1239 aa19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 ABCF2Q9UG63 623 aa19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 USHBP1Q8N6Y0 703 aa19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 ZSWIM4Q9H7M6 989 aa19.81■□□□□ 0.76
PTP4A1-201ENST00000370651 SSRP1Q08945 709 aaKnown RBP19.8■□□□□ 0.76
PTP4A1-201ENST00000370651 AMOTQ4VCS5 1084 aa19.8■□□□□ 0.76
PTP4A1-201ENST00000370651 CACNA2D4Q7Z3S7 1137 aa19.8■□□□□ 0.76
PTP4A1-201ENST00000370651 LUZP1Q86V48 1076 aa19.8■□□□□ 0.76
PTP4A1-201ENST00000370651 BRF1Q92994 677 aa19.8■□□□□ 0.76
PTP4A1-201ENST00000370651 DNAJC25Q9H1X3 360 aa19.8■□□□□ 0.76
PTP4A1-201ENST00000370651 TTC21BQ7Z4L5 1316 aa19.8■□□□□ 0.76
PTP4A1-201ENST00000370651 PI4KAP2A4QPH2 592 aa19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 MINDY4BA8MYZ0 360 aa19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 PI4KAP1Q8N8J0 262 aa19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 DCTPP1Q9H773 170 aa19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 DNAI1Q9UI46 699 aa19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.79■□□□□ 0.761e-6■■□□□ 12.3
PTP4A1-201ENST00000370651 PRAG1Q86YV5 1406 aa19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 GTPBP4Q9BZE4 634 aaKnown RBP19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 SLU7O95391 586 aaKnown RBP19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 RBM25P49756 843 aaKnown RBP19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 ARFGAP3Q9NP61 516 aa19.79■□□□□ 0.76
PTP4A1-201ENST00000370651 IFIT3O14879 490 aaKnown RBP19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 IARSP41252 1262 aaKnown RBP19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 UBASH3AP57075 661 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 TYRO3Q06418 890 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 MICALCLQ6ZW33 695 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 KDM2BQ8NHM5 1336 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 GOLIM4O00461 696 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 PPFIA3O75145 1194 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 CTR9Q6PD62 1173 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 MAP3K2Q9Y2U5 619 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 MPRIPQ6WCQ1 1025 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 INTS4Q96HW7 963 aaKnown RBP19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 TCEANC2Q96MN5 208 aa19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 CTCFLQ8NI51 663 aaPredicted RBP19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 RBM8AQ9Y5S9 174 aaKnown RBP19.78■□□□□ 0.76
PTP4A1-201ENST00000370651 NUP160Q12769 1436 aa19.77■□□□□ 0.76
PTP4A1-201ENST00000370651 A0A087WZG4 1122 aa19.77■□□□□ 0.76
PTP4A1-201ENST00000370651 IGHMBP2P38935 993 aaKnown RBP19.77■□□□□ 0.76
PTP4A1-201ENST00000370651 C8orf58Q8NAV2 365 aa19.77■□□□□ 0.76
PTP4A1-201ENST00000370651 PIK3C2GO75747 1445 aa19.77■□□□□ 0.76
PTP4A1-201ENST00000370651 ANKRD62A6NC57 917 aa19.77■□□□□ 0.76
PTP4A1-201ENST00000370651 TESK2Q96S53 571 aa19.77■□□□□ 0.76
PTP4A1-201ENST00000370651 ANKRD18AQ8IVF6 992 aa19.77■□□□□ 0.75
PTP4A1-201ENST00000370651 RNF123Q5XPI4 1314 aa19.77■□□□□ 0.75
PTP4A1-201ENST00000370651 SYKP43405 635 aa19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 RNF187Q5TA31 235 aaPredicted RBP19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 MRPS27Q92552 414 aaKnown RBP19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 CC2D2AQ9P2K1 1620 aa19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 ZC3H6P61129 1189 aaKnown RBP19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 MAP3K12Q12852 859 aa19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 KANK3Q6NY19 840 aa19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 PLEKHM2Q8IWE5 1019 aa19.76■□□□□ 0.75
PTP4A1-201ENST00000370651 IDI1Q13907 227 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms