RNA–Protein interactions for RNA: ENST00000370558.8

SH3GLB1-201, Transcript of SH3 domain containing GRB2 like, endophilin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GLB1, Length 6,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GLB1-201ENST00000370558 PRC1O43663 620 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 SYCP3Q8IZU3 236 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 PUF60Q9UHX1 559 aaKnown RBP12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 KIF5BP33176 963 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 NME9Q86XW9 330 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 CKAP2LQ8IYA6 745 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 SSH1Q8WYL5 1049 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 TAOK3Q9H2K8 898 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 LIMCH1Q9UPQ0 1083 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 SPECC1Q5M775 1068 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 KAT14Q9H8E8 782 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 TSPY2A6NKD2 308 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 STXBP4Q6ZWJ1 553 aa12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 DBF4Q9UBU7 674 aaPredicted RBP12.76□□□□□ -0.37
SH3GLB1-201ENST00000370558 TTF1Q15361 905 aaPredicted RBP12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 SLC4A8Q2Y0W8 1093 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 ERICH3Q5RHP9 1530 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 BAG3O95817 575 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 PRPF4BQ13523 1007 aaKnown RBP12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 DDX46Q7L014 1031 aaKnown RBP12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 ALS2CR12Q96Q35 445 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 PHF8Q9UPP1 1060 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 GOLIM4O00461 696 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 PDE4BQ07343 736 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 LARP6Q9BRS8 491 aaKnown RBP12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 FOXO3O43524 673 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 HLA-DOAP06340 250 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 HLTFQ14527 1009 aaKnown RBP eCLIP12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 PLEKHH1Q9ULM0 1364 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
SH3GLB1-201ENST00000370558 IARSP41252 1262 aaKnown RBP12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 GRIPAP1Q4V328 841 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 ZNF622Q969S3 477 aaKnown RBP eCLIP12.74□□□□□ -0.372e-6■□□□□ 8.5
SH3GLB1-201ENST00000370558 USP16Q9Y5T5 823 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 LDHAL6AQ6ZMR3 332 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 EVI5LQ96CN4 794 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 BIN1O00499 593 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 CEP63Q96MT8 703 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 SNRKQ9NRH2 765 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 NOP2P46087 812 aaKnown RBP12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 PANK2Q9BZ23 570 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 TRMT1Q9NXH9 659 aaKnown RBP12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 PABPN1LA6NDY0 278 aaKnown RBP12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 NAA15Q9BXJ9 866 aaKnown RBP12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 HOMER2Q9NSB8 354 aa12.74□□□□□ -0.37
SH3GLB1-201ENST00000370558 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 EHBP1L1Q8N3D4 1523 aa12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 UBA7P41226 1012 aa12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 FAM114A1Q8IWE2 563 aa12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 BICD1Q96G01 975 aa12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 RARSP54136 660 aaKnown RBP12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 MFSD6Q6ZSS7 791 aa12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 HAND2P61296 217 aa12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 RNF187Q5TA31 235 aaPredicted RBP12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 CWC25Q9NXE8 425 aaPredicted RBP12.73□□□□□ -0.37
SH3GLB1-201ENST00000370558 TMC6Q7Z403 805 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 FERMT1Q9BQL6 677 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 MICU3Q86XE3 530 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 DDX19AQ9NUU7 478 aaKnown RBP12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 TFIP11Q9UBB9 837 aaKnown RBP12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 ABCC11Q96J66 1382 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 GJB2P29033 226 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 PPP1R42Q7Z4L9 355 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 GIMAP7Q8NHV1 300 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 MYO1BO43795 1136 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 CCDC184Q52MB2 194 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 RAB11FIP4Q86YS3 637 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 MMRN2Q9H8L6 949 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 TROQ12816 1431 aaPredicted RBP12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 FSD2A1L4K1 749 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 SLC26A6Q9BXS9 759 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 ECHDC1Q9NTX5 307 aa12.72□□□□□ -0.37
SH3GLB1-201ENST00000370558 CA8P35219 290 aa12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 RFC4P35249 363 aa12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 METAP2P50579 478 aaKnown RBP eCLIP12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 PPM1EQ8WY54 764 aa12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 CCDC175P0C221 793 aa12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 LMAN1P49257 510 aa12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 TSNARE1Q96NA8 513 aa12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 ORC3Q9UBD5 711 aaPredicted RBP12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 SSFA2P28290 1259 aa12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 FLIIQ13045 1269 aa12.71□□□□□ -0.37
SH3GLB1-201ENST00000370558 TBCAO75347 108 aaKnown RBP12.71□□□□□ -0.38
SH3GLB1-201ENST00000370558 STX1AQ16623 288 aa12.71□□□□□ -0.38
SH3GLB1-201ENST00000370558 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.38
SH3GLB1-201ENST00000370558 ACTN2P35609 894 aa12.71□□□□□ -0.38
SH3GLB1-201ENST00000370558 AMOTL2Q9Y2J4 779 aa12.71□□□□□ -0.38
SH3GLB1-201ENST00000370558 POLA1P09884 1462 aaPredicted RBP12.71□□□□□ -0.38
SH3GLB1-201ENST00000370558 LRRC27Q9C0I9 530 aa12.7□□□□□ -0.38
SH3GLB1-201ENST00000370558 USP25Q9UHP3 1055 aa12.7□□□□□ -0.38
SH3GLB1-201ENST00000370558 ISM2Q6H9L7 571 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms