RNA–Protein interactions for RNA: ENST00000370056.8

VAV3-202, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAV3, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-202ENST00000370056 TEX13AQ9BXU3 409 aaPredicted RBP25.22■■□□□ 1.63
VAV3-202ENST00000370056 YTHDC2Q9H6S0 1430 aaKnown RBP25.22■■□□□ 1.63
VAV3-202ENST00000370056 CKAP2LQ8IYA6 745 aa25.22■■□□□ 1.63
VAV3-202ENST00000370056 C16orf71Q8IYS4 520 aaPredicted RBP25.22■■□□□ 1.63
VAV3-202ENST00000370056 GOLGA8BA8MQT2 603 aa25.22■■□□□ 1.63
VAV3-202ENST00000370056 CAVIN4Q5BKX8 364 aa25.22■■□□□ 1.63
VAV3-202ENST00000370056 FAM177A1Q8N128 213 aaPredicted RBP25.22■■□□□ 1.63
VAV3-202ENST00000370056 SLC5A1P13866 664 aa25.21■■□□□ 1.63
VAV3-202ENST00000370056 MCM5P33992 734 aa25.21■■□□□ 1.63
VAV3-202ENST00000370056 ZSCAN23Q3MJ62 389 aa25.21■■□□□ 1.63
VAV3-202ENST00000370056 AKAP4Q5JQC9 854 aa25.21■■□□□ 1.63
VAV3-202ENST00000370056 BICDL1Q6ZP65 573 aa25.21■■□□□ 1.63
VAV3-202ENST00000370056 TFIP11Q9UBB9 837 aaKnown RBP25.21■■□□□ 1.63
VAV3-202ENST00000370056 MINDY4BA8MYZ0 360 aa25.2■■□□□ 1.62
VAV3-202ENST00000370056 CCT2P78371 535 aaKnown RBP25.2■■□□□ 1.62
VAV3-202ENST00000370056 ZSCAN22P10073 491 aaPredicted RBP25.2■■□□□ 1.62
VAV3-202ENST00000370056 KSR2Q6VAB6 950 aa25.2■■□□□ 1.62
VAV3-202ENST00000370056 RBM27Q9P2N5 1060 aaKnown RBP25.2■■□□□ 1.62
VAV3-202ENST00000370056 CCDC66A2RUB6 948 aa25.19■■□□□ 1.62
VAV3-202ENST00000370056 UVSSAQ2YD98 709 aa25.19■■□□□ 1.62
VAV3-202ENST00000370056 TXLNBQ8N3L3 684 aa25.19■■□□□ 1.62
VAV3-202ENST00000370056 DEF6Q9H4E7 631 aa25.19■■□□□ 1.62
VAV3-202ENST00000370056 RNF41Q9H4P4 317 aaPredicted RBP25.19■■□□□ 1.62
VAV3-202ENST00000370056 SLC12A7Q9Y666 1083 aa25.19■■□□□ 1.62
VAV3-202ENST00000370056 BLMP54132 1417 aaPredicted RBP25.19■■□□□ 1.62
VAV3-202ENST00000370056 GCC2Q8IWJ2 1684 aa25.19■■□□□ 1.62
VAV3-202ENST00000370056 CWC15Q9P013 229 aaKnown RBP25.19■■□□□ 1.62
VAV3-202ENST00000370056 PBRM1Q86U86 1689 aa25.18■■□□□ 1.62
VAV3-202ENST00000370056 GRM8O00222 908 aa25.18■■□□□ 1.62
VAV3-202ENST00000370056 NOM1Q5C9Z4 860 aaKnown RBP25.18■■□□□ 1.62
VAV3-202ENST00000370056 FSIP1Q8NA03 581 aa25.18■■□□□ 1.62
VAV3-202ENST00000370056 KDM2BQ8NHM5 1336 aa25.18■■□□□ 1.62
VAV3-202ENST00000370056 BMP2KQ9NSY1 1161 aaPredicted RBP25.18■■□□□ 1.62
VAV3-202ENST00000370056 TTF1Q15361 905 aaPredicted RBP25.17■■□□□ 1.62
VAV3-202ENST00000370056 PTPN14Q15678 1187 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 PLEKHM2Q8IWE5 1019 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 SPATA31E1Q6ZUB1 1445 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 CLIP2Q9UDT6 1046 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 SEC24BO95487 1268 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 LRSAM1Q6UWE0 723 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 LDHAL6AQ6ZMR3 332 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 ERLIN1O75477 346 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 MYO6Q9UM54 1294 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 MAGI3Q5TCQ9 1506 aa25.17■■□□□ 1.62
VAV3-202ENST00000370056 ZNF287Q9HBT7 754 aa25.16■■□□□ 1.62
VAV3-202ENST00000370056 ZBTB7BO15156 539 aaPredicted RBP25.16■■□□□ 1.62
VAV3-202ENST00000370056 CAVIN2O95810 425 aa25.16■■□□□ 1.62
VAV3-202ENST00000370056 ODF2Q5BJF6 829 aa25.16■■□□□ 1.62
VAV3-202ENST00000370056 GOLGA8AA7E2F4 631 aa25.16■■□□□ 1.62
VAV3-202ENST00000370056 KRT24Q2M2I5 525 aa25.16■■□□□ 1.62
VAV3-202ENST00000370056 IFIT3O14879 490 aaKnown RBP25.15■■□□□ 1.62
VAV3-202ENST00000370056 IQCA1Q86XH1 822 aa25.15■■□□□ 1.62
VAV3-202ENST00000370056 XAGE3Q8WTP9 111 aa25.15■■□□□ 1.62
VAV3-202ENST00000370056 CTCFLQ8NI51 663 aaPredicted RBP25.15■■□□□ 1.62
VAV3-202ENST00000370056 TANGO6Q9C0B7 1094 aa25.15■■□□□ 1.62
VAV3-202ENST00000370056 PHAXQ9H814 394 aaKnown RBP25.15■■□□□ 1.62
VAV3-202ENST00000370056 USP16Q9Y5T5 823 aa25.15■■□□□ 1.62
VAV3-202ENST00000370056 SOS1Q07889 1333 aaPredicted RBP25.15■■□□□ 1.62
VAV3-202ENST00000370056 PIBF1Q8WXW3 757 aa25.15■■□□□ 1.62
VAV3-202ENST00000370056 CADPS2Q86UW7 1296 aa25.15■■□□□ 1.62
VAV3-202ENST00000370056 ZSCAN16Q9H4T2 348 aaPredicted RBP25.15■■□□□ 1.62
VAV3-202ENST00000370056 EPB41L2O43491 1005 aaKnown RBP25.14■■□□□ 1.62
VAV3-202ENST00000370056 GPTP24298 496 aa25.14■■□□□ 1.62
VAV3-202ENST00000370056 ZHX3Q9H4I2 956 aa25.14■■□□□ 1.62
VAV3-202ENST00000370056 SNRKQ9NRH2 765 aa25.14■■□□□ 1.62
VAV3-202ENST00000370056 RBM8AQ9Y5S9 174 aaKnown RBP25.14■■□□□ 1.62
VAV3-202ENST00000370056 ADCY5O95622 1261 aa25.14■■□□□ 1.62
VAV3-202ENST00000370056 RAB3GAP1Q15042 981 aa25.14■■□□□ 1.61
VAV3-202ENST00000370056 LINS1Q8NG48 757 aa25.14■■□□□ 1.61
VAV3-202ENST00000370056 TTC41PQ6P2S7 1318 aa25.14■■□□□ 1.61
VAV3-202ENST00000370056 NEMFO60524 1076 aa25.14■■□□□ 1.61
VAV3-202ENST00000370056 COPS6Q7L5N1 327 aa25.14■■□□□ 1.61
VAV3-202ENST00000370056 ATP7AQ04656 1500 aa25.13■■□□□ 1.61
VAV3-202ENST00000370056 XRCC6P12956 609 aaKnown RBP eCLIP25.13■■□□□ 1.61
VAV3-202ENST00000370056 SSRP1Q08945 709 aaKnown RBP25.13■■□□□ 1.61
VAV3-202ENST00000370056 EYA1Q99502 592 aa25.13■■□□□ 1.61
VAV3-202ENST00000370056 STX1AQ16623 288 aa25.13■■□□□ 1.61
VAV3-202ENST00000370056 PDCL2Q8N4E4 241 aa25.13■■□□□ 1.61
VAV3-202ENST00000370056 UBXN4Q92575 508 aa25.13■■□□□ 1.61
VAV3-202ENST00000370056 ORC3Q9UBD5 711 aaPredicted RBP25.13■■□□□ 1.61
VAV3-202ENST00000370056 MAP3K5Q99683 1374 aa25.12■■□□□ 1.61
VAV3-202ENST00000370056 ZSCAN12O43309 604 aa25.12■■□□□ 1.61
VAV3-202ENST00000370056 ZNF165P49910 485 aa25.12■■□□□ 1.61
VAV3-202ENST00000370056 ARHGAP29Q52LW3 1261 aa25.12■■□□□ 1.61
VAV3-202ENST00000370056 DDX46Q7L014 1031 aaKnown RBP25.12■■□□□ 1.61
VAV3-202ENST00000370056 NCOA7Q8NI08 942 aa25.12■■□□□ 1.61
VAV3-202ENST00000370056 KIF18AQ8NI77 898 aa25.12■■□□□ 1.61
VAV3-202ENST00000370056 BRF1Q92994 677 aa25.12■■□□□ 1.61
VAV3-202ENST00000370056 USP5P45974 858 aa25.11■■□□□ 1.61
VAV3-202ENST00000370056 NECAB1Q8N987 351 aa25.11■■□□□ 1.61
VAV3-202ENST00000370056 SSBP05455 408 aaKnown RBP eCLIP25.11■■□□□ 1.61
VAV3-202ENST00000370056 IARSP41252 1262 aaKnown RBP25.11■■□□□ 1.61
VAV3-202ENST00000370056 CHRNA2Q15822 529 aa25.11■■□□□ 1.61
VAV3-202ENST00000370056 CCDC181Q5TID7 509 aa25.11■■□□□ 1.61
VAV3-202ENST00000370056 JARID2Q92833 1246 aaPredicted RBP25.11■■□□□ 1.61
VAV3-202ENST00000370056 RANBP6O60518 1105 aaKnown RBP25.1■■□□□ 1.61
VAV3-202ENST00000370056 EIF5P55010 431 aaKnown RBP25.1■■□□□ 1.61
VAV3-202ENST00000370056 CCDC82Q8N4S0 544 aa25.1■■□□□ 1.61
VAV3-202ENST00000370056 EXOC5O00471 708 aa25.1■■□□□ 1.61
VAV3-202ENST00000370056 SYCP1Q15431 976 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms