RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 CTAGE5O15320 804 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 CLEC17AQ6ZS10 378 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.42□□□□□ -0.1
RAP1A-202ENST00000369709 ATP2B1P20020 1258 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 TRIM29Q14134 588 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 PHACTR3Q96KR7 559 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 NUP153P49790 1475 aaKnown RBP14.42□□□□□ -0.1
RAP1A-202ENST00000369709 TEFQ10587 303 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 PPFIBP1Q86W92 1011 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 CPLX3Q8WVH0 158 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 EIF2AK4Q9P2K8 1649 aaKnown RBP14.42□□□□□ -0.1
RAP1A-202ENST00000369709 NPC1L1Q9UHC9 1359 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 IFNKQ9P0W0 207 aa14.42□□□□□ -0.1
RAP1A-202ENST00000369709 SEC31AO94979 1220 aaKnown RBP14.41□□□□□ -0.1
RAP1A-202ENST00000369709 SPTLC3Q9NUV7 552 aa14.41□□□□□ -0.1
RAP1A-202ENST00000369709 AIMP1Q12904 312 aaKnown RBP14.41□□□□□ -0.1
RAP1A-202ENST00000369709 MLECQ14165 292 aa14.41□□□□□ -0.1
RAP1A-202ENST00000369709 IPO7O95373 1038 aaKnown RBP14.41□□□□□ -0.1
RAP1A-202ENST00000369709 MSH6P52701 1360 aa14.41□□□□□ -0.1
RAP1A-202ENST00000369709 CTR9Q6PD62 1173 aa14.41□□□□□ -0.1
RAP1A-202ENST00000369709 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
RAP1A-202ENST00000369709 CCT2P78371 535 aaKnown RBP14.4□□□□□ -0.1
RAP1A-202ENST00000369709 PUF60Q9UHX1 559 aaKnown RBP14.4□□□□□ -0.1
RAP1A-202ENST00000369709 CDR1P51861 262 aa14.4□□□□□ -0.1
RAP1A-202ENST00000369709 CACTINQ8WUQ7 758 aaKnown RBP14.4□□□□□ -0.1
RAP1A-202ENST00000369709 KCNF1Q9H3M0 494 aa14.4□□□□□ -0.1
RAP1A-202ENST00000369709 HIP1O00291 1037 aa14.4□□□□□ -0.1
RAP1A-202ENST00000369709 LMOD1P29536 600 aaPredicted RBP14.4□□□□□ -0.1
RAP1A-202ENST00000369709 KMT5BQ4FZB7 885 aa14.4□□□□□ -0.1
RAP1A-202ENST00000369709 SLC26A8Q96RN1 970 aa14.4□□□□□ -0.1
RAP1A-202ENST00000369709 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
RAP1A-202ENST00000369709 WDR7Q9Y4E6 1490 aa14.4□□□□□ -0.1
RAP1A-202ENST00000369709 CAVIN2O95810 425 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 CALRP27797 417 aaKnown RBP14.39□□□□□ -0.11
RAP1A-202ENST00000369709 KIF1BPQ96EK5 621 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 UTP14AQ9BVJ6 771 aaKnown RBP14.39□□□□□ -0.11
RAP1A-202ENST00000369709 LRRC8AQ8IWT6 810 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 SIRT2Q8IXJ6 389 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 CRACR2AQ9BSW2 395 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 MRVI1Q9Y6F6 885 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 WDR62O43379 1518 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 HDGFL1Q5TGJ6 251 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 CDC37L1Q7L3B6 337 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 SNX14Q9Y5W7 946 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 SHTN1A0MZ66 631 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 KIF5CO60282 957 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 GLRX3O76003 335 aaKnown RBP14.39□□□□□ -0.11
RAP1A-202ENST00000369709 LRRC2Q9BYS8 371 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 BOLA2Q9H3K6 86 aa14.39□□□□□ -0.11
RAP1A-202ENST00000369709 SMC1AQ14683 1233 aaKnown RBP14.38□□□□□ -0.11
RAP1A-202ENST00000369709 KARSQ15046 597 aaKnown RBP14.38□□□□□ -0.11
RAP1A-202ENST00000369709 CT47A1Q5JQC4 288 aaPredicted RBP14.38□□□□□ -0.11
RAP1A-202ENST00000369709 ANKRD7Q92527 254 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 CHMP4CQ96CF2 233 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 CLSTN2Q9H4D0 955 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 RAI14Q9P0K7 980 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 SLC3A2P08195 630 aaKnown RBP14.38□□□□□ -0.11
RAP1A-202ENST00000369709 NEUROD6Q96NK8 337 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 NCOA3Q9Y6Q9 1424 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.38□□□□□ -0.111e-6■■■□□ 15.4
RAP1A-202ENST00000369709 PTPRCP08575 1304 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 NPHP3Q7Z494 1330 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 UBASH3AP57075 661 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 ARID5BQ14865 1188 aa14.38□□□□□ -0.11
RAP1A-202ENST00000369709 LARP1Q6PKG0 1096 aaKnown RBP14.37□□□□□ -0.11
RAP1A-202ENST00000369709 CYP2E1P05181 493 aaPredicted RBP14.37□□□□□ -0.11
RAP1A-202ENST00000369709 RHOXF2BP0C7M4 288 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 NAP1L1P55209 391 aaKnown RBP14.37□□□□□ -0.11
RAP1A-202ENST00000369709 ANKRD20A12PQ8NF67 263 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 SMARCE1Q969G3 411 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 RHOXF2Q9BQY4 288 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 GBP3Q9H0R5 595 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 POLR3DP05423 398 aaPredicted RBP14.37□□□□□ -0.11
RAP1A-202ENST00000369709 RAD51AP2Q09MP3 1159 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 NFXL1Q6ZNB6 911 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 SYNJ2O15056 1496 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 FYB1O15117 783 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 GOLGA1Q92805 767 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 RABEP2Q9H5N1 569 aa14.37□□□□□ -0.11
RAP1A-202ENST00000369709 POLR1AO95602 1720 aaPredicted RBP14.36□□□□□ -0.11
RAP1A-202ENST00000369709 RNF187Q5TA31 235 aaPredicted RBP14.36□□□□□ -0.11
RAP1A-202ENST00000369709 CCDC8Q9H0W5 538 aaPredicted RBP14.36□□□□□ -0.11
RAP1A-202ENST00000369709 MORC2Q9Y6X9 1032 aaPredicted RBP14.36□□□□□ -0.11
RAP1A-202ENST00000369709 GYS2P54840 703 aa14.36□□□□□ -0.11
RAP1A-202ENST00000369709 ZNF330Q9Y3S2 320 aaPredicted RBP14.36□□□□□ -0.11
RAP1A-202ENST00000369709 A0A087WWV3 80 aa14.36□□□□□ -0.11
RAP1A-202ENST00000369709 EPB41L2O43491 1005 aaKnown RBP14.36□□□□□ -0.11
RAP1A-202ENST00000369709 PPP2R3AQ06190 1150 aa14.36□□□□□ -0.11
RAP1A-202ENST00000369709 SYCP1Q15431 976 aa14.36□□□□□ -0.11
RAP1A-202ENST00000369709 PPP1R42Q7Z4L9 355 aa14.36□□□□□ -0.11
RAP1A-202ENST00000369709 BRF1Q92994 677 aa14.36□□□□□ -0.11
RAP1A-202ENST00000369709 NR1I2O75469 434 aa14.36□□□□□ -0.11
RAP1A-202ENST00000369709 CLCN6P51797 869 aa14.35□□□□□ -0.11
RAP1A-202ENST00000369709 CPLX2Q6PUV4 134 aaKnown RBP14.35□□□□□ -0.11
RAP1A-202ENST00000369709 NME9Q86XW9 330 aa14.35□□□□□ -0.11
RAP1A-202ENST00000369709 RBM8AQ9Y5S9 174 aaKnown RBP14.35□□□□□ -0.11
RAP1A-202ENST00000369709 NOS1P29475 1434 aa14.35□□□□□ -0.11
RAP1A-202ENST00000369709 NGDNQ8NEJ9 315 aaKnown RBP14.35□□□□□ -0.11
RAP1A-202ENST00000369709 FILIP1LQ4L180 1135 aa14.35□□□□□ -0.11
RAP1A-202ENST00000369709 SLFN14P0C7P3 912 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms