RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 ZSCAN31Q96LW9 406 aaPredicted RBP11.92□□□□□ -0.5
HIPK1-206ENST00000369559 SH2B1Q9NRF2 756 aaPredicted RBP11.92□□□□□ -0.5
HIPK1-206ENST00000369559 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
HIPK1-206ENST00000369559 CPA1P15085 419 aa11.92□□□□□ -0.5
HIPK1-206ENST00000369559 COG3Q96JB2 828 aa11.92□□□□□ -0.5
HIPK1-206ENST00000369559 ZNF215Q9UL58 517 aaPredicted RBP11.92□□□□□ -0.5
HIPK1-206ENST00000369559 ARHGEF10O15013 1369 aa11.92□□□□□ -0.5
HIPK1-206ENST00000369559 SULT6B1Q6IMI4 303 aa11.92□□□□□ -0.5
HIPK1-206ENST00000369559 IL1RAPL2Q9NP60 686 aa11.92□□□□□ -0.5
HIPK1-206ENST00000369559 DACT1Q9NYF0 836 aa11.92□□□□□ -0.5
HIPK1-206ENST00000369559 VGLL3A8MV65 326 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 VPS53Q5VIR6 699 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 SLC52A1Q9NWF4 448 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 CALCOCO1Q9P1Z2 691 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 CRB1P82279 1406 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 DTNBO60941 627 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 CDC25BP30305 580 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 CCDC144BQ3MJ40 725 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 SLFNL1Q499Z3 407 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 FBXO38Q6PIJ6 1188 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 RBM43Q6ZSC3 357 aaKnown RBP11.91□□□□□ -0.5
HIPK1-206ENST00000369559 CCDC144CPQ8IYA2 1237 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 DDX19AQ9NUU7 478 aaKnown RBP11.91□□□□□ -0.5
HIPK1-206ENST00000369559 NRKQ7Z2Y5 1582 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 ALKQ9UM73 1620 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 CREBRFQ8IUR6 639 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 PI4K2BQ8TCG2 481 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 IPO4Q8TEX9 1081 aaKnown RBP11.91□□□□□ -0.5
HIPK1-206ENST00000369559 ERO1AQ96HE7 468 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
HIPK1-206ENST00000369559 PDRG1Q9NUG6 133 aa11.91□□□□□ -0.5
HIPK1-206ENST00000369559 FER1L4A9Z1Z3 1794 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 KDM4FA0A1W2PPD8 638 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 PDIA4P13667 645 aaKnown RBP11.9□□□□□ -0.5
HIPK1-206ENST00000369559 ZNF165P49910 485 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 SLC20A2Q08357 652 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 PTPN14Q15678 1187 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 LRRFIP2Q9Y608 721 aaKnown RBP11.9□□□□□ -0.5
HIPK1-206ENST00000369559 SOS1Q07889 1333 aaPredicted RBP11.9□□□□□ -0.5
HIPK1-206ENST00000369559 TTC21AQ8NDW8 1320 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 NEMFO60524 1076 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 RBM6P78332 1123 aaKnown RBP11.9□□□□□ -0.5
HIPK1-206ENST00000369559 NYAP1Q6ZVC0 841 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 LRRC8AQ8IWT6 810 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 CNTROBQ8N137 903 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 MIS18AQ9NYP9 233 aa11.9□□□□□ -0.5
HIPK1-206ENST00000369559 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.9□□□□□ -0.5
HIPK1-206ENST00000369559 V9GYY5 206 aaPredicted RBP11.9□□□□□ -0.5
HIPK1-206ENST00000369559 TMEM131LA2VDJ0 1609 aa11.9□□□□□ -0.51
HIPK1-206ENST00000369559 DLC1Q96QB1 1528 aa11.9□□□□□ -0.51
HIPK1-206ENST00000369559 GOLGA6L4A6NEF3 574 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 ERICH4A6NGS2 130 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 ST3GAL1Q11201 340 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 LARP1BQ659C4 914 aaKnown RBP11.89□□□□□ -0.51
HIPK1-206ENST00000369559 CLSTN2Q9H4D0 955 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 SPG7Q9UQ90 795 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 ELF2Q15723 593 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 CWC27Q6UX04 472 aaKnown RBP11.89□□□□□ -0.51
HIPK1-206ENST00000369559 STK31Q9BXU1 1019 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 SCAND2PQ9GZW5 306 aaPredicted RBP11.89□□□□□ -0.51
HIPK1-206ENST00000369559 NPHP3Q7Z494 1330 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 RIMS1Q86UR5 1692 aaKnown RBP11.89□□□□□ -0.51
HIPK1-206ENST00000369559 USP27XA6NNY8 438 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 EIF4A2Q14240 407 aaKnown RBP11.89□□□□□ -0.51
HIPK1-206ENST00000369559 CDC37L1Q7L3B6 337 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 JAKMIP1Q96N16 626 aaKnown RBP11.89□□□□□ -0.51
HIPK1-206ENST00000369559 DNAJC2Q99543 621 aaKnown RBP11.89□□□□□ -0.51
HIPK1-206ENST00000369559 DNAJC25Q9H1X3 360 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 TSPYL4Q9UJ04 414 aa11.89□□□□□ -0.51
HIPK1-206ENST00000369559 XRN1Q8IZH2 1706 aaKnown RBP11.88□□□□□ -0.51
HIPK1-206ENST00000369559 ME3Q16798 604 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 FERMT3Q86UX7 667 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 ZSWIM6Q9HCJ5 1215 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 CYP46A1Q9Y6A2 500 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 ADAMTSL3P82987 1691 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 RAB11FIP3O75154 756 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 CAVIN2O95810 425 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 FLIIQ13045 1269 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 ADCK5Q3MIX3 580 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 FAM173BQ6P4H8 233 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 KIF1BPQ96EK5 621 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 TM6SF1Q9BZW5 370 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 TULP2O00295 520 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
HIPK1-206ENST00000369559 SLU7O95391 586 aaKnown RBP11.87□□□□□ -0.51
HIPK1-206ENST00000369559 PDCP20941 246 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 RNF20Q5VTR2 975 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 SARM1Q6SZW1 724 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 WAPLQ7Z5K2 1190 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 NECAB1Q8N987 351 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 SSH3Q8TE77 659 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 ST7Q9NRC1 585 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 CPS1P31327 1500 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 SKILP12757 684 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 MRFAP1L1Q96HT8 127 aa11.87□□□□□ -0.51
HIPK1-206ENST00000369559 ERBB3P21860 1342 aa11.86□□□□□ -0.51
HIPK1-206ENST00000369559 ZNF446Q9NWS9 450 aa11.86□□□□□ -0.51
HIPK1-206ENST00000369559 TTC21BQ7Z4L5 1316 aa11.86□□□□□ -0.51
HIPK1-206ENST00000369559 GOLGA6L19H0YKK7 550 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms