RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 HSPA4P34932 840 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 PTH1RQ03431 593 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 G3BP1Q13283 466 aaKnown RBP eCLIP13.92□□□□□ -0.18
RAB39B-201ENST00000369454 HSP90AB4PQ58FF6 505 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
RAB39B-201ENST00000369454 USP16Q9Y5T5 823 aa13.92□□□□□ -0.18
RAB39B-201ENST00000369454 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
RAB39B-201ENST00000369454 ERBB4Q15303 1308 aa13.91□□□□□ -0.18
RAB39B-201ENST00000369454 GLRX3O76003 335 aaKnown RBP13.91□□□□□ -0.18
RAB39B-201ENST00000369454 DDX58O95786 925 aaKnown RBP13.91□□□□□ -0.18
RAB39B-201ENST00000369454 HYPKQ9NX55 129 aa13.91□□□□□ -0.18
RAB39B-201ENST00000369454 CHD2O14647 1828 aaKnown RBP13.91□□□□□ -0.18
RAB39B-201ENST00000369454 ANP32BQ92688 251 aaKnown RBP13.91□□□□□ -0.18
RAB39B-201ENST00000369454 EDC3Q96F86 508 aaKnown RBP13.91□□□□□ -0.18
RAB39B-201ENST00000369454 TCEANC2Q96MN5 208 aa13.91□□□□□ -0.18
RAB39B-201ENST00000369454 ECHDC1Q9NTX5 307 aa13.91□□□□□ -0.18
RAB39B-201ENST00000369454 TATP17735 454 aaPredicted RBP13.9□□□□□ -0.18
RAB39B-201ENST00000369454 AK2P54819 239 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 CLEC17AQ6ZS10 378 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 EAF2Q96CJ1 260 aaPredicted RBP13.9□□□□□ -0.18
RAB39B-201ENST00000369454 KAZALD1Q96I82 304 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 FAM227BQ96M60 508 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 TMEM63CQ9P1W3 806 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 MCM2P49736 904 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 ANAPC15P60006 121 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 LINS1Q8NG48 757 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 NAP1L5Q96NT1 182 aaPredicted RBP13.9□□□□□ -0.18
RAB39B-201ENST00000369454 CHMP4AQ9BY43 222 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
RAB39B-201ENST00000369454 C19orf44Q9H6X5 657 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 DDX21Q9NR30 783 aaKnown RBP eCLIP13.9□□□□□ -0.18
RAB39B-201ENST00000369454 RAD50Q92878 1312 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 PXDNLA1KZ92 1463 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 IGKV5-2P06315 115 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 ADCK5Q3MIX3 580 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 TTC5Q8N0Z6 440 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
RAB39B-201ENST00000369454 CHMP3Q9Y3E7 222 aa13.9□□□□□ -0.18
RAB39B-201ENST00000369454 SASH1O94885 1247 aa13.89□□□□□ -0.19
RAB39B-201ENST00000369454 NEXNQ0ZGT2 675 aa13.89□□□□□ -0.19
RAB39B-201ENST00000369454 RBSNQ9H1K0 784 aa13.89□□□□□ -0.19
RAB39B-201ENST00000369454 PDIA6Q15084 440 aa13.89□□□□□ -0.19
RAB39B-201ENST00000369454 EPHA10Q5JZY3 1008 aa13.89□□□□□ -0.19
RAB39B-201ENST00000369454 ALDH1L1O75891 902 aa13.89□□□□□ -0.19
RAB39B-201ENST00000369454 GPATCH3Q96I76 525 aa13.89□□□□□ -0.19
RAB39B-201ENST00000369454 ESPNB1AK53 854 aa13.88□□□□□ -0.19
RAB39B-201ENST00000369454 GADD45BO75293 160 aaPredicted RBP13.88□□□□□ -0.19
RAB39B-201ENST00000369454 LARGE1O95461 756 aa13.88□□□□□ -0.19
RAB39B-201ENST00000369454 BRD1O95696 1058 aa13.88□□□□□ -0.19
RAB39B-201ENST00000369454 COL9A3Q14050 684 aaPredicted RBP13.88□□□□□ -0.19
RAB39B-201ENST00000369454 SLC52A2Q9HAB3 445 aa13.88□□□□□ -0.19
RAB39B-201ENST00000369454 ZNF330Q9Y3S2 320 aaPredicted RBP13.88□□□□□ -0.19
RAB39B-201ENST00000369454 AOX1Q06278 1338 aa13.88□□□□□ -0.19
RAB39B-201ENST00000369454 NPHP3Q7Z494 1330 aa13.88□□□□□ -0.19
RAB39B-201ENST00000369454 CUL4AQ13619 759 aa13.88□□□□□ -0.19
RAB39B-201ENST00000369454 CCDC83Q8IWF9 413 aa13.88□□□□□ -0.19
RAB39B-201ENST00000369454 HSPA2P54652 639 aa13.87□□□□□ -0.19
RAB39B-201ENST00000369454 UBE3BQ7Z3V4 1068 aa13.87□□□□□ -0.19
RAB39B-201ENST00000369454 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
RAB39B-201ENST00000369454 CACNA1FO60840 1977 aa13.87□□□□□ -0.19
RAB39B-201ENST00000369454 CHGBP05060 677 aa13.87□□□□□ -0.19
RAB39B-201ENST00000369454 PHKG2P15735 406 aa13.87□□□□□ -0.19
RAB39B-201ENST00000369454 ISY1Q9ULR0 285 aaKnown RBP13.87□□□□□ -0.19
RAB39B-201ENST00000369454 RUFY3Q7L099 469 aa13.87□□□□□ -0.19
RAB39B-201ENST00000369454 NECAB1Q8N987 351 aa13.87□□□□□ -0.19
RAB39B-201ENST00000369454 NMIQ13287 307 aaPredicted RBP13.86□□□□□ -0.19
RAB39B-201ENST00000369454 NEURL1BA8MQ27 555 aa13.86□□□□□ -0.19
RAB39B-201ENST00000369454 CYP27B1O15528 508 aa13.86□□□□□ -0.19
RAB39B-201ENST00000369454 LARP1Q6PKG0 1096 aaKnown RBP13.86□□□□□ -0.19
RAB39B-201ENST00000369454 ANKRD13DQ6ZTN6 518 aa13.86□□□□□ -0.19
RAB39B-201ENST00000369454 MPNDQ8N594 471 aa13.86□□□□□ -0.19
RAB39B-201ENST00000369454 RUFY2Q8WXA3 655 aa13.86□□□□□ -0.19
RAB39B-201ENST00000369454 TTC41PQ6P2S7 1318 aa13.86□□□□□ -0.19
RAB39B-201ENST00000369454 C1orf167Q5SNV9 1468 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 CABP4P57796 275 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 ERC1Q8IUD2 1116 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 IFNL2Q8IZJ0 200 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 SMC3Q9UQE7 1217 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 CNPY2Q9Y2B0 182 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 FIBPO43427 364 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 MTX1Q13505 466 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 GCKRQ14397 625 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 USP48Q86UV5 1035 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 DNAJC2Q99543 621 aaKnown RBP13.85□□□□□ -0.19
RAB39B-201ENST00000369454 PDRG1Q9NUG6 133 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 TMEM94Q12767 1356 aa13.85□□□□□ -0.19
RAB39B-201ENST00000369454 A0A0D9SFI3 127 aa13.84□□□□□ -0.19
RAB39B-201ENST00000369454 INTS4Q96HW7 963 aaKnown RBP13.84□□□□□ -0.19
RAB39B-201ENST00000369454 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
RAB39B-201ENST00000369454 RBM8AQ9Y5S9 174 aaKnown RBP13.84□□□□□ -0.19
RAB39B-201ENST00000369454 TAF6LQ9Y6J9 622 aa13.84□□□□□ -0.19
RAB39B-201ENST00000369454 VPS37CA5D8V6 355 aaPredicted RBP13.84□□□□□ -0.19
RAB39B-201ENST00000369454 ZNF445P59923 1031 aa13.84□□□□□ -0.19
RAB39B-201ENST00000369454 EVI5LQ96CN4 794 aa13.84□□□□□ -0.19
RAB39B-201ENST00000369454 MED1Q15648 1581 aaPredicted RBP13.83□□□□□ -0.2
RAB39B-201ENST00000369454 A0A087WZG4 1122 aa13.83□□□□□ -0.2
RAB39B-201ENST00000369454 STK3Q13188 491 aa13.83□□□□□ -0.2
RAB39B-201ENST00000369454 WDR33Q9C0J8 1336 aaKnown RBP13.83□□□□□ -0.2
RAB39B-201ENST00000369454 SYT1P21579 422 aa13.83□□□□□ -0.2
RAB39B-201ENST00000369454 KDM6AO15550 1401 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms