RNA–Protein interactions for RNA: ENST00000369452.8

SHOC2-202, Transcript of SHOC2, leucine rich repeat scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOC2, Length 3,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOC2-202ENST00000369452 OSBPL3Q9H4L5 887 aa16.2■□□□□ 0.18
SHOC2-202ENST00000369452 ERVV-2B6SEH9 535 aa16.2■□□□□ 0.18
SHOC2-202ENST00000369452 RBM25P49756 843 aaKnown RBP16.2■□□□□ 0.18
SHOC2-202ENST00000369452 CASP7P55210 303 aa16.2■□□□□ 0.18
SHOC2-202ENST00000369452 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
SHOC2-202ENST00000369452 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
SHOC2-202ENST00000369452 PI4K2BQ8TCG2 481 aa16.2■□□□□ 0.18
SHOC2-202ENST00000369452 SLIT2O94813 1529 aa16.19■□□□□ 0.18
SHOC2-202ENST00000369452 GRM8O00222 908 aa16.19■□□□□ 0.18
SHOC2-202ENST00000369452 GCKRQ14397 625 aa16.19■□□□□ 0.18
SHOC2-202ENST00000369452 LINS1Q8NG48 757 aa16.19■□□□□ 0.18
SHOC2-202ENST00000369452 METTL22Q9BUU2 404 aaPredicted RBP16.19■□□□□ 0.18
SHOC2-202ENST00000369452 SASH1O94885 1247 aa16.19■□□□□ 0.18
SHOC2-202ENST00000369452 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
SHOC2-202ENST00000369452 ANKRD13DQ6ZTN6 518 aa16.19■□□□□ 0.18
SHOC2-202ENST00000369452 MTX1Q13505 466 aa16.18■□□□□ 0.18
SHOC2-202ENST00000369452 RIC3Q7Z5B4 369 aa16.18■□□□□ 0.18
SHOC2-202ENST00000369452 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
SHOC2-202ENST00000369452 TLR7Q9NYK1 1049 aaKnown RBP16.18■□□□□ 0.18
SHOC2-202ENST00000369452 NUTM2BA6NNL0 878 aaPredicted RBP16.18■□□□□ 0.18
SHOC2-202ENST00000369452 NUTM2EB1AL46 878 aaPredicted RBP16.18■□□□□ 0.18
SHOC2-202ENST00000369452 NUTM2AQ8IVF1 878 aaPredicted RBP16.18■□□□□ 0.18
SHOC2-202ENST00000369452 ERICH6Q7L0X2 663 aa16.17■□□□□ 0.18
SHOC2-202ENST00000369452 PTF1AQ7RTS3 328 aa16.17■□□□□ 0.18
SHOC2-202ENST00000369452 MYH14Q7Z406 1995 aaKnown RBP16.17■□□□□ 0.18
SHOC2-202ENST00000369452 MX1P20591 662 aa16.17■□□□□ 0.18
SHOC2-202ENST00000369452 HMMRO75330 724 aa16.17■□□□□ 0.18
SHOC2-202ENST00000369452 C9orf78Q9NZ63 289 aaPredicted RBP16.17■□□□□ 0.18
SHOC2-202ENST00000369452 BCL9O00512 1426 aa16.17■□□□□ 0.18
SHOC2-202ENST00000369452 ALDH1L1O75891 902 aa16.16■□□□□ 0.18
SHOC2-202ENST00000369452 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
SHOC2-202ENST00000369452 DDRGK1Q96HY6 314 aa16.16■□□□□ 0.18
SHOC2-202ENST00000369452 DNAJC10Q8IXB1 793 aa16.16■□□□□ 0.18
SHOC2-202ENST00000369452 RFX5P48382 616 aaPredicted RBP16.16■□□□□ 0.18
SHOC2-202ENST00000369452 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
SHOC2-202ENST00000369452 SLKQ9H2G2 1235 aaPredicted RBP16.16■□□□□ 0.18
SHOC2-202ENST00000369452 UTRNP46939 3433 aa16.15■□□□□ 0.18
SHOC2-202ENST00000369452 CDC45O75419 566 aa16.15■□□□□ 0.18
SHOC2-202ENST00000369452 ZBTB3Q9H5J0 574 aa16.15■□□□□ 0.18
SHOC2-202ENST00000369452 SPATA31A1Q5TZJ5 1347 aa16.15■□□□□ 0.18
SHOC2-202ENST00000369452 USP26Q9BXU7 913 aa16.15■□□□□ 0.18
SHOC2-202ENST00000369452 STAP2Q9UGK3 403 aa16.15■□□□□ 0.18
SHOC2-202ENST00000369452 SIL1Q9H173 461 aa16.15■□□□□ 0.18
SHOC2-202ENST00000369452 CHGBP05060 677 aa16.14■□□□□ 0.17
SHOC2-202ENST00000369452 UBE3BQ7Z3V4 1068 aa16.14■□□□□ 0.17
SHOC2-202ENST00000369452 MARCH10Q8NA82 808 aaPredicted RBP16.13■□□□□ 0.17
SHOC2-202ENST00000369452 LRP6O75581 1613 aa16.13■□□□□ 0.17
SHOC2-202ENST00000369452 NUP98P52948 1817 aa16.13■□□□□ 0.17
SHOC2-202ENST00000369452 FOXO4P98177 505 aa16.13■□□□□ 0.17
SHOC2-202ENST00000369452 TMOD3Q9NYL9 352 aa16.13■□□□□ 0.17
SHOC2-202ENST00000369452 EAF2Q96CJ1 260 aaPredicted RBP16.12■□□□□ 0.17
SHOC2-202ENST00000369452 COL4A1P02462 1669 aa16.12■□□□□ 0.17
SHOC2-202ENST00000369452 PRIM1P49642 420 aaKnown RBP16.12■□□□□ 0.17
SHOC2-202ENST00000369452 COL9A3Q14050 684 aaPredicted RBP16.12■□□□□ 0.17
SHOC2-202ENST00000369452 HLFQ16534 295 aa16.12■□□□□ 0.17
SHOC2-202ENST00000369452 ACSBG1Q96GR2 724 aa16.12■□□□□ 0.17
SHOC2-202ENST00000369452 PALD1Q9ULE6 856 aa16.12■□□□□ 0.17
SHOC2-202ENST00000369452 NWD2Q9ULI1 1742 aa16.12■□□□□ 0.17
SHOC2-202ENST00000369452 BCL9LQ86UU0 1499 aa16.12■□□□□ 0.17
SHOC2-202ENST00000369452 KCNQ2O43526 872 aa16.11■□□□□ 0.17
SHOC2-202ENST00000369452 PLBD2Q8NHP8 589 aa16.11■□□□□ 0.17
SHOC2-202ENST00000369452 NDUFB9Q9Y6M9 179 aa16.11■□□□□ 0.17
SHOC2-202ENST00000369452 PTPN12Q05209 780 aaKnown RBP16.11■□□□□ 0.17
SHOC2-202ENST00000369452 SMIM5Q71RC9 77 aa16.11■□□□□ 0.17
SHOC2-202ENST00000369452 CHMLP26374 656 aa16.1■□□□□ 0.17
SHOC2-202ENST00000369452 FRAT2O75474 233 aaPredicted RBP16.1■□□□□ 0.17
SHOC2-202ENST00000369452 A0A087WZG4 1122 aa16.09■□□□□ 0.17
SHOC2-202ENST00000369452 KCNQ4P56696 695 aa16.09■□□□□ 0.17
SHOC2-202ENST00000369452 RILPL2Q969X0 211 aa16.09■□□□□ 0.17
SHOC2-202ENST00000369452 SYTL4Q96C24 671 aaPredicted RBP16.09■□□□□ 0.17
SHOC2-202ENST00000369452 DDX58O95786 925 aaKnown RBP16.09■□□□□ 0.17
SHOC2-202ENST00000369452 DDIT3P35638 169 aa16.09■□□□□ 0.17
SHOC2-202ENST00000369452 NFKBIBQ15653 356 aa16.09■□□□□ 0.17
SHOC2-202ENST00000369452 SPATA31A5Q5VU36 1347 aa16.09■□□□□ 0.17
SHOC2-202ENST00000369452 SPATA31A7Q8IWB4 1347 aa16.09■□□□□ 0.17
SHOC2-202ENST00000369452 ANKRD36CQ5JPF3 1778 aa16.09■□□□□ 0.17
SHOC2-202ENST00000369452 CCDC8Q9H0W5 538 aaPredicted RBP16.09■□□□□ 0.17
SHOC2-202ENST00000369452 RABL6Q3YEC7 729 aaPredicted RBP16.08■□□□□ 0.17
SHOC2-202ENST00000369452 EDC3Q96F86 508 aaKnown RBP16.08■□□□□ 0.17
SHOC2-202ENST00000369452 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.17
SHOC2-202ENST00000369452 ZNF330Q9Y3S2 320 aaPredicted RBP16.08■□□□□ 0.17
SHOC2-202ENST00000369452 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.16
SHOC2-202ENST00000369452 H7C1W4 665 aa16.08■□□□□ 0.16
SHOC2-202ENST00000369452 CYP19A1P11511 503 aaPredicted RBP16.08■□□□□ 0.16
SHOC2-202ENST00000369452 KIF1BPQ96EK5 621 aa16.08■□□□□ 0.16
SHOC2-202ENST00000369452 FAM182BQ5T319 152 aa16.07■□□□□ 0.16
SHOC2-202ENST00000369452 ZNF594Q96JF6 807 aaPredicted RBP16.07■□□□□ 0.16
SHOC2-202ENST00000369452 ESYT1Q9BSJ8 1104 aa16.07■□□□□ 0.16
SHOC2-202ENST00000369452 RAB11FIP3O75154 756 aa16.06■□□□□ 0.16
SHOC2-202ENST00000369452 FOXD4L1Q9NU39 408 aa16.06■□□□□ 0.16
SHOC2-202ENST00000369452 CASZ1Q86V15 1759 aa16.06■□□□□ 0.16
SHOC2-202ENST00000369452 USP42Q9H9J4 1324 aaKnown RBP16.06■□□□□ 0.16
SHOC2-202ENST00000369452 TRIM6-TRIM34B2RNG4 842 aa16.06■□□□□ 0.16
SHOC2-202ENST00000369452 EXOC5O00471 708 aa16.06■□□□□ 0.16
SHOC2-202ENST00000369452 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
SHOC2-202ENST00000369452 ITPK1Q13572 414 aa16.05■□□□□ 0.16
SHOC2-202ENST00000369452 LMBR1LQ6UX01 489 aa16.05■□□□□ 0.16
SHOC2-202ENST00000369452 SLFNL1Q499Z3 407 aa16.05■□□□□ 0.16
SHOC2-202ENST00000369452 ATG9AQ7Z3C6 839 aa16.05■□□□□ 0.16
SHOC2-202ENST00000369452 RREB1Q92766 1687 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms