RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 KSR2Q6VAB6 950 aa31.97■■■□□ 2.71
NSMCE4A-201ENST00000369017 RIC3Q7Z5B4 369 aa31.97■■■□□ 2.71
NSMCE4A-201ENST00000369017 SOCS7O14512 581 aa31.96■■■□□ 2.71
NSMCE4A-201ENST00000369017 ARHGEF1Q92888 912 aaKnown RBP31.96■■■□□ 2.71
NSMCE4A-201ENST00000369017 NARFQ9UHQ1 456 aa31.96■■■□□ 2.71
NSMCE4A-201ENST00000369017 MAP3K15Q6ZN16 1313 aa31.96■■■□□ 2.71
NSMCE4A-201ENST00000369017 G2E3Q7L622 706 aa31.95■■■□□ 2.71
NSMCE4A-201ENST00000369017 HSP90AB3PQ58FF7 597 aa31.94■■■□□ 2.7
NSMCE4A-201ENST00000369017 CLEC4GQ6UXB4 293 aa31.94■■■□□ 2.7
NSMCE4A-201ENST00000369017 ATF7IPQ6VMQ6 1270 aa31.94■■■□□ 2.7
NSMCE4A-201ENST00000369017 ANO8Q9HCE9 1232 aaPredicted RBP31.94■■■□□ 2.7
NSMCE4A-201ENST00000369017 TBC1D2BQ9UPU7 963 aa31.94■■■□□ 2.7
NSMCE4A-201ENST00000369017 MSH5O43196 834 aa31.93■■■□□ 2.7
NSMCE4A-201ENST00000369017 NEXNQ0ZGT2 675 aa31.93■■■□□ 2.7
NSMCE4A-201ENST00000369017 TTLL7Q6ZT98 887 aa31.92■■■□□ 2.7
NSMCE4A-201ENST00000369017 PI4KAP2A4QPH2 592 aa31.91■■■□□ 2.7
NSMCE4A-201ENST00000369017 PI4KAP1Q8N8J0 262 aa31.91■■■□□ 2.7
NSMCE4A-201ENST00000369017 GIGYF2Q6Y7W6 1299 aaKnown RBP31.9■■■□□ 2.7
NSMCE4A-201ENST00000369017 DNAAF4Q8WXU2 420 aa31.9■■■□□ 2.7
NSMCE4A-201ENST00000369017 ZBTB3Q9H5J0 574 aa31.9■■■□□ 2.7
NSMCE4A-201ENST00000369017 USP42Q9H9J4 1324 aaKnown RBP31.9■■■□□ 2.7
NSMCE4A-201ENST00000369017 CAMTA2O94983 1202 aa31.89■■■□□ 2.7
NSMCE4A-201ENST00000369017 FTSJ3Q8IY81 847 aaKnown RBP31.89■■■□□ 2.7
NSMCE4A-201ENST00000369017 MAP3K2Q9Y2U5 619 aa31.89■■■□□ 2.7
NSMCE4A-201ENST00000369017 PNPLA7Q6ZV29 1317 aa31.89■■■□□ 2.7
NSMCE4A-201ENST00000369017 COL23A1Q86Y22 540 aaPredicted RBP31.88■■■□□ 2.69
NSMCE4A-201ENST00000369017 SLC16A10Q8TF71 515 aa31.88■■■□□ 2.69
NSMCE4A-201ENST00000369017 TUBGCP6Q96RT7 1819 aa31.88■■■□□ 2.69
NSMCE4A-201ENST00000369017 C4AP0C0L4 1744 aa31.87■■■□□ 2.69
NSMCE4A-201ENST00000369017 USPL1Q5W0Q7 1092 aa31.86■■■□□ 2.69
NSMCE4A-201ENST00000369017 METTL22Q9BUU2 404 aaPredicted RBP31.86■■■□□ 2.69
NSMCE4A-201ENST00000369017 RRP1P56182 461 aaKnown RBP31.85■■■□□ 2.69
NSMCE4A-201ENST00000369017 AMIGO3Q86WK7 504 aa31.85■■■□□ 2.69
NSMCE4A-201ENST00000369017 NLGN1Q8N2Q7 840 aa31.85■■■□□ 2.69
NSMCE4A-201ENST00000369017 BCORQ6W2J9 1755 aa31.85■■■□□ 2.69
NSMCE4A-201ENST00000369017 SCN7AQ01118 1682 aa31.85■■■□□ 2.69
NSMCE4A-201ENST00000369017 PXDNLA1KZ92 1463 aa31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 ADCY9O60503 1353 aa31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 TRIM27P14373 513 aa31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 CCT4P50991 539 aaKnown RBP31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 TCIRG1Q13488 830 aa31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 PDE3AQ14432 1141 aa31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 SLC4A10Q6U841 1118 aa31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 DZIP1LQ8IYY4 767 aaKnown RBP31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 SUPT16HQ9Y5B9 1047 aaKnown RBP31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 ARFGEF2Q9Y6D5 1785 aa31.84■■■□□ 2.69
NSMCE4A-201ENST00000369017 SMIM5Q71RC9 77 aa31.81■■■□□ 2.68
NSMCE4A-201ENST00000369017 LINS1Q8NG48 757 aa31.81■■■□□ 2.68
NSMCE4A-201ENST00000369017 SRP68Q9UHB9 627 aaKnown RBP31.81■■■□□ 2.68
NSMCE4A-201ENST00000369017 NUP98P52948 1817 aa31.81■■■□□ 2.68
NSMCE4A-201ENST00000369017 RNF123Q5XPI4 1314 aa31.8■■■□□ 2.68
NSMCE4A-201ENST00000369017 F6X3S4 739 aa31.8■■■□□ 2.68
NSMCE4A-201ENST00000369017 R3HDM1Q15032 1099 aaKnown RBP31.8■■■□□ 2.68
NSMCE4A-201ENST00000369017 MYD88Q99836 296 aa31.8■■■□□ 2.68
NSMCE4A-201ENST00000369017 SRCIN1Q9C0H9 1055 aa31.8■■■□□ 2.68
NSMCE4A-201ENST00000369017 ATP10DQ9P241 1426 aa31.8■■■□□ 2.68
NSMCE4A-201ENST00000369017 ABCC4O15439 1325 aa31.79■■■□□ 2.68
NSMCE4A-201ENST00000369017 GYS1P13807 737 aa31.79■■■□□ 2.68
NSMCE4A-201ENST00000369017 TRIM28Q13263 835 aaKnown RBP31.79■■■□□ 2.68
NSMCE4A-201ENST00000369017 HLFQ16534 295 aa31.79■■■□□ 2.68
NSMCE4A-201ENST00000369017 PARP10Q53GL7 1025 aa31.79■■■□□ 2.68
NSMCE4A-201ENST00000369017 CHMP4BQ9H444 224 aaKnown RBP31.79■■■□□ 2.68
NSMCE4A-201ENST00000369017 ALDH1L1O75891 902 aa31.78■■■□□ 2.68
NSMCE4A-201ENST00000369017 SETDB2Q96T68 719 aa31.78■■■□□ 2.68
NSMCE4A-201ENST00000369017 PLIN1O60240 522 aa31.77■■■□□ 2.68
NSMCE4A-201ENST00000369017 CCDC191Q8NCU4 936 aa31.77■■■□□ 2.68
NSMCE4A-201ENST00000369017 CLUAP1Q96AJ1 413 aa31.77■■■□□ 2.68
NSMCE4A-201ENST00000369017 NIP7Q9Y221 180 aaKnown RBP eCLIP31.77■■■□□ 2.68
NSMCE4A-201ENST00000369017 ANKRD36CQ5JPF3 1778 aa31.76■■■□□ 2.68
NSMCE4A-201ENST00000369017 INTS3Q68E01 1043 aaKnown RBP31.76■■■□□ 2.67
NSMCE4A-201ENST00000369017 IBTKQ9P2D0 1353 aaPredicted RBP31.76■■■□□ 2.67
NSMCE4A-201ENST00000369017 BEND3Q5T5X7 828 aa31.75■■■□□ 2.67
NSMCE4A-201ENST00000369017 PPP1R42Q7Z4L9 355 aa31.75■■■□□ 2.67
NSMCE4A-201ENST00000369017 ZNF34Q8IZ26 560 aa31.75■■■□□ 2.67
NSMCE4A-201ENST00000369017 BCL2L12Q9HB09 334 aa31.75■■■□□ 2.67
NSMCE4A-201ENST00000369017 ISCA1Q9BUE6 129 aa31.74■■■□□ 2.67
NSMCE4A-201ENST00000369017 CWC25Q9NXE8 425 aaPredicted RBP31.74■■■□□ 2.67
NSMCE4A-201ENST00000369017 HDAC5Q9UQL6 1122 aa31.74■■■□□ 2.67
NSMCE4A-201ENST00000369017 FKBP8Q14318 412 aa31.73■■■□□ 2.67
NSMCE4A-201ENST00000369017 NYXQ9GZU5 481 aa31.73■■■□□ 2.67
NSMCE4A-201ENST00000369017 CARMIL3Q8ND23 1372 aa31.72■■■□□ 2.67
NSMCE4A-201ENST00000369017 N4BP2Q86UW6 1770 aaPredicted RBP31.71■■■□□ 2.67
NSMCE4A-201ENST00000369017 NEURL1BA8MQ27 555 aa31.71■■■□□ 2.67
NSMCE4A-201ENST00000369017 ATP5J2-PTCD1G3V325 749 aa31.71■■■□□ 2.67
NSMCE4A-201ENST00000369017 HSP90B1P14625 803 aaKnown RBP31.71■■■□□ 2.67
NSMCE4A-201ENST00000369017 TBC1D9BQ66K14 1250 aa31.71■■■□□ 2.67
NSMCE4A-201ENST00000369017 MTFR1LQ9H019 292 aa31.71■■■□□ 2.67
NSMCE4A-201ENST00000369017 GPTP24298 496 aa31.7■■■□□ 2.67
NSMCE4A-201ENST00000369017 ITPRIPQ8IWB1 547 aa31.7■■■□□ 2.67
NSMCE4A-201ENST00000369017 BICDL1Q6ZP65 573 aa31.69■■■□□ 2.66
NSMCE4A-201ENST00000369017 NLRP10Q86W26 655 aa31.69■■■□□ 2.66
NSMCE4A-201ENST00000369017 TMEM57Q8N5G2 664 aa31.69■■■□□ 2.66
NSMCE4A-201ENST00000369017 DDX19BQ9UMR2 479 aa31.69■■■□□ 2.66
NSMCE4A-201ENST00000369017 AFDNP55196 1824 aaKnown RBP31.68■■■□□ 2.66
NSMCE4A-201ENST00000369017 PSDA5PKW4 1024 aaPredicted RBP31.68■■■□□ 2.66
NSMCE4A-201ENST00000369017 NPHP1O15259 732 aa31.68■■■□□ 2.66
NSMCE4A-201ENST00000369017 IGKV5-2P06315 115 aa31.68■■■□□ 2.66
NSMCE4A-201ENST00000369017 TM4SF1P30408 202 aa31.68■■■□□ 2.66
NSMCE4A-201ENST00000369017 NFIXQ14938 502 aa31.68■■■□□ 2.66
NSMCE4A-201ENST00000369017 CWF19L2Q2TBE0 894 aaKnown RBP31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms