RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
EBF3-202ENST00000368648 C8orf37Q96NL8 207 aa12.66□□□□□ -0.38
EBF3-202ENST00000368648 LRRC2Q9BYS8 371 aa12.66□□□□□ -0.38
EBF3-202ENST00000368648 CFAP43Q8NDM7 1665 aa12.66□□□□□ -0.38
EBF3-202ENST00000368648 LRRFIP2Q9Y608 721 aaKnown RBP12.66□□□□□ -0.38
EBF3-202ENST00000368648 CCT2P78371 535 aaKnown RBP12.66□□□□□ -0.38
EBF3-202ENST00000368648 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
EBF3-202ENST00000368648 GTPBP4Q9BZE4 634 aaKnown RBP12.66□□□□□ -0.38
EBF3-202ENST00000368648 MCM6Q14566 821 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 TCOF1Q13428 1488 aaKnown RBP12.65□□□□□ -0.38
EBF3-202ENST00000368648 MYRIPQ8NFW9 859 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 PLCD4Q9BRC7 762 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 CCDC8Q9H0W5 538 aaPredicted RBP12.65□□□□□ -0.38
EBF3-202ENST00000368648 DEF6Q9H4E7 631 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 CNNM1Q9NRU3 951 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 DNAI1Q9UI46 699 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 MBIPQ9NS73 344 aa12.65□□□□□ -0.38
EBF3-202ENST00000368648 AKAP17AQ02040 695 aaKnown RBP12.65□□□□□ -0.39
EBF3-202ENST00000368648 TRDNQ13061 729 aa12.65□□□□□ -0.39
EBF3-202ENST00000368648 SAMD9LQ8IVG5 1584 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 SNW1Q13573 536 aaKnown RBP12.64□□□□□ -0.39
EBF3-202ENST00000368648 CCDC70Q6NSX1 233 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 ANXA1P04083 346 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 LRRFIP1Q32MZ4 808 aaKnown RBP12.64□□□□□ -0.39
EBF3-202ENST00000368648 KLHL10Q6JEL2 608 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 PLEKHM2Q8IWE5 1019 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 USP19O94966 1318 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 LIG1P18858 919 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 LTKP29376 864 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 LRMPQ12912 555 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 LRRC59Q96AG4 307 aaKnown RBP12.64□□□□□ -0.39
EBF3-202ENST00000368648 TBX22Q9Y458 520 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 DIP2BQ9P265 1576 aa12.64□□□□□ -0.39
EBF3-202ENST00000368648 ZSCAN22P10073 491 aaPredicted RBP12.63□□□□□ -0.39
EBF3-202ENST00000368648 HS1BP3Q53T59 392 aa12.63□□□□□ -0.39
EBF3-202ENST00000368648 PRAG1Q86YV5 1406 aa12.63□□□□□ -0.39
EBF3-202ENST00000368648 USP26Q9BXU7 913 aa12.63□□□□□ -0.39
EBF3-202ENST00000368648 MLH3Q9UHC1 1453 aa12.63□□□□□ -0.39
EBF3-202ENST00000368648 PPIP5K1Q6PFW1 1433 aa12.63□□□□□ -0.39
EBF3-202ENST00000368648 VPS53Q5VIR6 699 aa12.63□□□□□ -0.39
EBF3-202ENST00000368648 CCDC82Q8N4S0 544 aa12.63□□□□□ -0.39
EBF3-202ENST00000368648 ACBD3Q9H3P7 528 aa12.63□□□□□ -0.39
EBF3-202ENST00000368648 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
EBF3-202ENST00000368648 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
EBF3-202ENST00000368648 STARD3NLO95772 234 aa12.62□□□□□ -0.39
EBF3-202ENST00000368648 GPT2Q8TD30 523 aa12.62□□□□□ -0.39
EBF3-202ENST00000368648 DDX17Q92841 729 aaKnown RBP12.62□□□□□ -0.39
EBF3-202ENST00000368648 MAGI2Q86UL8 1455 aa12.62□□□□□ -0.39
EBF3-202ENST00000368648 RDXP35241 583 aaKnown RBP12.62□□□□□ -0.39
EBF3-202ENST00000368648 PDE1AP54750 535 aa12.62□□□□□ -0.39
EBF3-202ENST00000368648 AMOTQ4VCS5 1084 aa12.62□□□□□ -0.39
EBF3-202ENST00000368648 RRP12Q5JTH9 1297 aaKnown RBP12.62□□□□□ -0.39
EBF3-202ENST00000368648 ABCC1P33527 1531 aa12.62□□□□□ -0.39
EBF3-202ENST00000368648 ZNF445P59923 1031 aa12.62□□□□□ -0.39
EBF3-202ENST00000368648 ERCC4Q92889 916 aaPredicted RBP12.62□□□□□ -0.39
EBF3-202ENST00000368648 POLR3DP05423 398 aaPredicted RBP12.62□□□□□ -0.39
EBF3-202ENST00000368648 ALDH1L2Q3SY69 923 aa12.62□□□□□ -0.39
EBF3-202ENST00000368648 BMS1Q14692 1282 aaKnown RBP12.61□□□□□ -0.39
EBF3-202ENST00000368648 PIBF1Q8WXW3 757 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 PPP1R9BQ96SB3 815 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 CFAP45Q9UL16 551 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 NSFL1CQ9UNZ2 370 aaKnown RBP12.61□□□□□ -0.39
EBF3-202ENST00000368648 DHX16O60231 1041 aaKnown RBP12.61□□□□□ -0.39
EBF3-202ENST00000368648 ARHGAP29Q52LW3 1261 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 FSIP1Q8NA03 581 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 FAM200AQ8TCP9 573 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 ZNF396Q96N95 335 aaPredicted RBP12.61□□□□□ -0.39
EBF3-202ENST00000368648 SCAND2PQ9GZW5 306 aaPredicted RBP12.61□□□□□ -0.39
EBF3-202ENST00000368648 LMTK3Q96Q04 1460 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 DNA2P51530 1060 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 GNG11P61952 73 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 PPARDQ03181 441 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 TYRO3Q06418 890 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 MPHOSPH8Q99549 860 aa12.61□□□□□ -0.39
EBF3-202ENST00000368648 ZBTB22O15209 634 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 ELF2Q15723 593 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 KIF4BQ2VIQ3 1234 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 SYT10Q6XYQ8 523 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 ACSBG1Q96GR2 724 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 UVSSAQ2YD98 709 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 ANKRD20A12PQ8NF67 263 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 RSPH14Q9UHP6 348 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 USP16Q9Y5T5 823 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 SYT1P21579 422 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 ESYT1Q9BSJ8 1104 aa12.6□□□□□ -0.39
EBF3-202ENST00000368648 SHANK2Q9UPX8 1470 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 KIF20AO95235 890 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 CCDC57Q2TAC2 916 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 PPFIBP1Q86W92 1011 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 RABEP2Q9H5N1 569 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 CFAP74Q9C0B2 1584 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 GCP02774 474 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 LMOD1P29536 600 aaPredicted RBP12.59□□□□□ -0.39
EBF3-202ENST00000368648 GPTP24298 496 aa12.59□□□□□ -0.39
EBF3-202ENST00000368648 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms