RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 FAM198AQ9UFP1 575 aa11.64□□□□□ -0.55
TPM3-213ENST00000368545 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
TPM3-213ENST00000368545 HDGFL2Q7Z4V5 671 aaPredicted RBP11.63□□□□□ -0.55
TPM3-213ENST00000368545 INSRP06213 1382 aa11.63□□□□□ -0.55
TPM3-213ENST00000368545 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
TPM3-213ENST00000368545 VAC14Q08AM6 782 aa11.63□□□□□ -0.55
TPM3-213ENST00000368545 PNISRQ8TF01 805 aaKnown RBP11.63□□□□□ -0.55
TPM3-213ENST00000368545 EYA1Q99502 592 aa11.63□□□□□ -0.55
TPM3-213ENST00000368545 HMX1Q9NP08 348 aaPredicted RBP11.63□□□□□ -0.55
TPM3-213ENST00000368545 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
TPM3-213ENST00000368545 PPP2R1AP30153 589 aa11.62□□□□□ -0.55
TPM3-213ENST00000368545 HNRNPUQ00839 825 aaKnown RBP eCLIP11.62□□□□□ -0.55
TPM3-213ENST00000368545 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
TPM3-213ENST00000368545 SULF1Q8IWU6 871 aa11.62□□□□□ -0.55
TPM3-213ENST00000368545 ALS2Q96Q42 1657 aa11.62□□□□□ -0.55
TPM3-213ENST00000368545 PALM3A6NDB9 673 aaPredicted RBP11.62□□□□□ -0.55
TPM3-213ENST00000368545 ZNF454Q8N9F8 522 aa11.62□□□□□ -0.55
TPM3-213ENST00000368545 ADAM33Q9BZ11 813 aa11.62□□□□□ -0.55
TPM3-213ENST00000368545 COL24A1Q17RW2 1714 aa11.61□□□□□ -0.55
TPM3-213ENST00000368545 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
TPM3-213ENST00000368545 CDCA7Q9BWT1 371 aaPredicted RBP11.61□□□□□ -0.55
TPM3-213ENST00000368545 TRPM3Q9HCF6 1732 aaPredicted RBP11.61□□□□□ -0.55
TPM3-213ENST00000368545 XPCQ01831 940 aaPredicted RBP11.6□□□□□ -0.55
TPM3-213ENST00000368545 TNS4Q8IZW8 715 aa11.6□□□□□ -0.55
TPM3-213ENST00000368545 CPSF1Q10570 1443 aaKnown RBP11.6□□□□□ -0.55
TPM3-213ENST00000368545 LMOD1P29536 600 aaPredicted RBP11.6□□□□□ -0.55
TPM3-213ENST00000368545 CLCN6P51797 869 aa11.6□□□□□ -0.55
TPM3-213ENST00000368545 SND1Q7KZF4 910 aaKnown RBP eCLIP11.6□□□□□ -0.55
TPM3-213ENST00000368545 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
TPM3-213ENST00000368545 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
TPM3-213ENST00000368545 EDC4Q6P2E9 1401 aaKnown RBP11.6□□□□□ -0.55
TPM3-213ENST00000368545 ZBED9Q6R2W3 1325 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 QSER1Q2KHR3 1735 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 CRYBG1Q9Y4K1 1723 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 POLD1P28340 1107 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 PRPF38BQ5VTL8 546 aaKnown RBP11.59□□□□□ -0.55
TPM3-213ENST00000368545 TCP11L2Q8N4U5 519 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 NUDT16Q96DE0 195 aaKnown RBP11.59□□□□□ -0.55
TPM3-213ENST00000368545 ATP10DQ9P241 1426 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 SLC15A2Q16348 729 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 MORC1Q86VD1 984 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 ALG2Q9H553 416 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 PRDM11Q9NQV5 511 aa11.59□□□□□ -0.55
TPM3-213ENST00000368545 PEAK1Q9H792 1746 aa11.58□□□□□ -0.56
TPM3-213ENST00000368545 C3orf80F5H4A9 247 aa11.58□□□□□ -0.56
TPM3-213ENST00000368545 EVX2Q03828 476 aa11.58□□□□□ -0.56
TPM3-213ENST00000368545 CTDSPL2Q05D32 466 aa11.58□□□□□ -0.56
TPM3-213ENST00000368545 JMYQ8N9B5 988 aa11.58□□□□□ -0.56
TPM3-213ENST00000368545 UCN2Q96RP3 112 aa11.58□□□□□ -0.56
TPM3-213ENST00000368545 VRTNQ9H8Y1 702 aa11.58□□□□□ -0.56
TPM3-213ENST00000368545 TMEM88BA6NKF7 163 aa11.57□□□□□ -0.56
TPM3-213ENST00000368545 SSH2Q76I76 1423 aa11.57□□□□□ -0.56
TPM3-213ENST00000368545 POTEFA5A3E0 1075 aa11.57□□□□□ -0.56
TPM3-213ENST00000368545 TFIP11Q9UBB9 837 aaKnown RBP11.57□□□□□ -0.56
TPM3-213ENST00000368545 POLR3AO14802 1390 aaPredicted RBP11.57□□□□□ -0.56
TPM3-213ENST00000368545 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
TPM3-213ENST00000368545 ADCY9O60503 1353 aa11.56□□□□□ -0.56
TPM3-213ENST00000368545 RGPD8O14715 1765 aaPredicted RBP11.56□□□□□ -0.56
TPM3-213ENST00000368545 PRR36Q9H6K5 1346 aa11.56□□□□□ -0.56
TPM3-213ENST00000368545 ZBTB7AO95365 584 aa11.56□□□□□ -0.56
TPM3-213ENST00000368545 WDR43Q15061 677 aaKnown RBP eCLIP11.55□□□□□ -0.56
TPM3-213ENST00000368545 FYB1O15117 783 aa11.54□□□□□ -0.56
TPM3-213ENST00000368545 KDM4AO75164 1064 aa11.54□□□□□ -0.56
TPM3-213ENST00000368545 EVA1CP58658 441 aa11.54□□□□□ -0.56
TPM3-213ENST00000368545 NUDT18Q6ZVK8 323 aa11.54□□□□□ -0.56
TPM3-213ENST00000368545 CPDO75976 1380 aa11.53□□□□□ -0.56
TPM3-213ENST00000368545 FAM182BQ5T319 152 aa11.53□□□□□ -0.56
TPM3-213ENST00000368545 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
TPM3-213ENST00000368545 SBF2Q86WG5 1849 aa11.53□□□□□ -0.56
TPM3-213ENST00000368545 COL9A1P20849 921 aa11.53□□□□□ -0.56
TPM3-213ENST00000368545 DNAJB2P25686 324 aa11.53□□□□□ -0.56
TPM3-213ENST00000368545 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
TPM3-213ENST00000368545 TMEM134Q9H6X4 195 aa11.53□□□□□ -0.56
TPM3-213ENST00000368545 USP6P35125 1406 aa11.52□□□□□ -0.57
TPM3-213ENST00000368545 ATG7O95352 703 aa11.52□□□□□ -0.57
TPM3-213ENST00000368545 LRRN4Q8WUT4 740 aa11.52□□□□□ -0.57
TPM3-213ENST00000368545 CFAP53Q96M91 514 aa11.52□□□□□ -0.57
TPM3-213ENST00000368545 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.57
TPM3-213ENST00000368545 PCDHGC3Q9UN70 934 aa11.52□□□□□ -0.57
TPM3-213ENST00000368545 PHRF1Q9P1Y6 1649 aaKnown RBP11.51□□□□□ -0.57
TPM3-213ENST00000368545 DNAJC5GQ8N7S2 189 aa11.51□□□□□ -0.57
TPM3-213ENST00000368545 RDH13Q8NBN7 331 aa11.51□□□□□ -0.57
TPM3-213ENST00000368545 EPS8L1Q8TE68 723 aa11.51□□□□□ -0.57
TPM3-213ENST00000368545 ACEP12821 1306 aa11.51□□□□□ -0.57
TPM3-213ENST00000368545 FDX1P10109 184 aa11.5□□□□□ -0.57
TPM3-213ENST00000368545 MAP2P11137 1827 aaKnown RBP11.5□□□□□ -0.57
TPM3-213ENST00000368545 HOXA2O43364 376 aa11.5□□□□□ -0.57
TPM3-213ENST00000368545 TNNT2P45379 298 aaPredicted RBP11.5□□□□□ -0.57
TPM3-213ENST00000368545 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.5□□□□□ -0.57
TPM3-213ENST00000368545 KLRG1Q96E93 195 aa11.5□□□□□ -0.57
TPM3-213ENST00000368545 USP54Q70EL1 1684 aa11.49□□□□□ -0.57
TPM3-213ENST00000368545 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
TPM3-213ENST00000368545 MTHFSP49914 203 aa11.49□□□□□ -0.57
TPM3-213ENST00000368545 GUCA2AQ02747 115 aa11.49□□□□□ -0.57
TPM3-213ENST00000368545 TXNRD1Q16881 649 aa11.49□□□□□ -0.57
TPM3-213ENST00000368545 HLA-CQ95604 372 aa11.49□□□□□ -0.57
TPM3-213ENST00000368545 ADAMTS8Q9UP79 889 aa11.49□□□□□ -0.57
TPM3-213ENST00000368545 MAFBQ9Y5Q3 323 aaPredicted RBP11.49□□□□□ -0.57
TPM3-213ENST00000368545 TTC21AQ8NDW8 1320 aa11.49□□□□□ -0.57
TPM3-213ENST00000368545 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms