RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 CT47B1P0C2W7 299 aaPredicted RBP17.8■□□□□ 0.44
TPM3-211ENST00000368531 SMC4Q9NTJ3 1288 aa17.8■□□□□ 0.44
TPM3-211ENST00000368531 BCORQ6W2J9 1755 aa17.8■□□□□ 0.44
TPM3-211ENST00000368531 NUP98P52948 1817 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 MAP3K15Q6ZN16 1313 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 GYS1P13807 737 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 FKBP8Q14318 412 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 HLFQ16534 295 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 MRPL50Q8N5N7 158 aaKnown RBP17.79■□□□□ 0.44
TPM3-211ENST00000368531 SLC16A10Q8TF71 515 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 SCN7AQ01118 1682 aa17.79■□□□□ 0.44
TPM3-211ENST00000368531 RARSP54136 660 aaKnown RBP17.78■□□□□ 0.44
TPM3-211ENST00000368531 ZNF428Q96B54 188 aa17.78■□□□□ 0.44
TPM3-211ENST00000368531 FLIIQ13045 1269 aa17.77■□□□□ 0.44
TPM3-211ENST00000368531 ALDH1L2Q3SY69 923 aa17.77■□□□□ 0.44
TPM3-211ENST00000368531 ANKRD13DQ6ZTN6 518 aa17.77■□□□□ 0.44
TPM3-211ENST00000368531 RIC3Q7Z5B4 369 aa17.77■□□□□ 0.44
TPM3-211ENST00000368531 MTFR1LQ9H019 292 aa17.77■□□□□ 0.44
TPM3-211ENST00000368531 ARFGEF2Q9Y6D5 1785 aa17.76■□□□□ 0.43
TPM3-211ENST00000368531 DDX58O95786 925 aaKnown RBP17.76■□□□□ 0.43
TPM3-211ENST00000368531 FKBP5Q13451 457 aaPredicted RBP17.76■□□□□ 0.43
TPM3-211ENST00000368531 TBC1D9BQ66K14 1250 aa17.76■□□□□ 0.43
TPM3-211ENST00000368531 PLBD2Q8NHP8 589 aa17.76■□□□□ 0.43
TPM3-211ENST00000368531 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
TPM3-211ENST00000368531 ERVV-1B6SEH8 477 aa17.75■□□□□ 0.43
TPM3-211ENST00000368531 BCAR3O75815 825 aa17.75■□□□□ 0.43
TPM3-211ENST00000368531 NLGN1Q8N2Q7 840 aa17.75■□□□□ 0.43
TPM3-211ENST00000368531 GPTP24298 496 aa17.74■□□□□ 0.43
TPM3-211ENST00000368531 SPON1Q9HCB6 807 aa17.74■□□□□ 0.43
TPM3-211ENST00000368531 MAP3K2Q9Y2U5 619 aa17.74■□□□□ 0.43
TPM3-211ENST00000368531 PI4KAP2A4QPH2 592 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 FAM177BA6PVY3 158 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 F6X3S4 739 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 MMP10P09238 476 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 NFIXQ14938 502 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 KSR2Q6VAB6 950 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 GIGYF2Q6Y7W6 1299 aaKnown RBP17.73■□□□□ 0.43
TPM3-211ENST00000368531 PI4KAP1Q8N8J0 262 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 RCAN3Q9UKA8 241 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 NOB1Q9ULX3 412 aaKnown RBP17.73■□□□□ 0.43
TPM3-211ENST00000368531 NIP7Q9Y221 180 aaKnown RBP eCLIP17.73■□□□□ 0.43
TPM3-211ENST00000368531 ANKRD36CQ5JPF3 1778 aa17.73■□□□□ 0.43
TPM3-211ENST00000368531 ATP5J2-PTCD1G3V325 749 aa17.72■□□□□ 0.43
TPM3-211ENST00000368531 CLEC4GQ6UXB4 293 aa17.72■□□□□ 0.43
TPM3-211ENST00000368531 FRAT1Q92837 279 aaPredicted RBP17.72■□□□□ 0.43
TPM3-211ENST00000368531 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
TPM3-211ENST00000368531 MYD88Q99836 296 aa17.72■□□□□ 0.43
TPM3-211ENST00000368531 ADCY9O60503 1353 aa17.71■□□□□ 0.43
TPM3-211ENST00000368531 POLD1P28340 1107 aa17.71■□□□□ 0.43
TPM3-211ENST00000368531 TM4SF1P30408 202 aa17.71■□□□□ 0.43
TPM3-211ENST00000368531 TCIRG1Q13488 830 aa17.71■□□□□ 0.43
TPM3-211ENST00000368531 PARP3Q9Y6F1 533 aa17.71■□□□□ 0.43
TPM3-211ENST00000368531 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
TPM3-211ENST00000368531 COL24A1Q17RW2 1714 aa17.7■□□□□ 0.42
TPM3-211ENST00000368531 DDR1Q08345 913 aa17.7■□□□□ 0.42
TPM3-211ENST00000368531 SLC4A10Q6U841 1118 aa17.7■□□□□ 0.42
TPM3-211ENST00000368531 PTGER2P43116 358 aa17.69■□□□□ 0.42
TPM3-211ENST00000368531 HSP90AB3PQ58FF7 597 aa17.69■□□□□ 0.42
TPM3-211ENST00000368531 DNAAF4Q8WXU2 420 aa17.69■□□□□ 0.42
TPM3-211ENST00000368531 METTL22Q9BUU2 404 aaPredicted RBP17.69■□□□□ 0.42
TPM3-211ENST00000368531 PTPRCP08575 1304 aa17.69■□□□□ 0.42
TPM3-211ENST00000368531 POLRMTO00411 1230 aaKnown RBP17.68■□□□□ 0.42
TPM3-211ENST00000368531 NPHP1O15259 732 aa17.68■□□□□ 0.42
TPM3-211ENST00000368531 SERPINB2P05120 415 aa17.68■□□□□ 0.42
TPM3-211ENST00000368531 ZNF34Q8IZ26 560 aa17.68■□□□□ 0.42
TPM3-211ENST00000368531 KLHL34Q8N239 644 aa17.68■□□□□ 0.42
TPM3-211ENST00000368531 CCDC24Q8N4L8 307 aa17.68■□□□□ 0.42
TPM3-211ENST00000368531 UBN2Q6ZU65 1347 aa17.68■□□□□ 0.42
TPM3-211ENST00000368531 KIF16BQ96L93 1317 aa17.68■□□□□ 0.42
TPM3-211ENST00000368531 RGL2O15211 777 aa17.67■□□□□ 0.42
TPM3-211ENST00000368531 BRPF1P55201 1214 aaPredicted RBP17.67■□□□□ 0.42
TPM3-211ENST00000368531 NEXNQ0ZGT2 675 aa17.67■□□□□ 0.42
TPM3-211ENST00000368531 SGIP1Q9BQI5 828 aa17.67■□□□□ 0.42
TPM3-211ENST00000368531 CARMIL3Q8ND23 1372 aa17.66■□□□□ 0.42
TPM3-211ENST00000368531 ATP10DQ9P241 1426 aa17.66■□□□□ 0.42
TPM3-211ENST00000368531 CWF19L2Q2TBE0 894 aaKnown RBP17.66■□□□□ 0.42
TPM3-211ENST00000368531 SUSD4Q5VX71 490 aa17.66■□□□□ 0.42
TPM3-211ENST00000368531 NBPF5PQ86XG9 351 aaPredicted RBP17.66■□□□□ 0.42
TPM3-211ENST00000368531 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
TPM3-211ENST00000368531 PPP1R1BQ9UD71 204 aaPredicted RBP17.66■□□□□ 0.42
TPM3-211ENST00000368531 TNNQ9UQP3 1299 aa17.66■□□□□ 0.42
TPM3-211ENST00000368531 IPO8O15397 1037 aaKnown RBP17.65■□□□□ 0.42
TPM3-211ENST00000368531 GTF2E1P29083 439 aaPredicted RBP17.65■□□□□ 0.42
TPM3-211ENST00000368531 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
TPM3-211ENST00000368531 NLRP10Q86W26 655 aa17.65■□□□□ 0.42
TPM3-211ENST00000368531 CLUAP1Q96AJ1 413 aa17.65■□□□□ 0.42
TPM3-211ENST00000368531 API5Q9BZZ5 524 aaKnown RBP17.65■□□□□ 0.42
TPM3-211ENST00000368531 IGKV5-2P06315 115 aa17.64■□□□□ 0.41
TPM3-211ENST00000368531 PARP10Q53GL7 1025 aa17.64■□□□□ 0.41
TPM3-211ENST00000368531 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.41
TPM3-211ENST00000368531 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
TPM3-211ENST00000368531 NUTM1Q86Y26 1132 aa17.64■□□□□ 0.41
TPM3-211ENST00000368531 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
TPM3-211ENST00000368531 PLIN1O60240 522 aa17.63■□□□□ 0.41
TPM3-211ENST00000368531 ATF7IPQ6VMQ6 1270 aa17.63■□□□□ 0.41
TPM3-211ENST00000368531 TPTE2Q6XPS3 522 aa17.63■□□□□ 0.41
TPM3-211ENST00000368531 CNBD1Q8NA66 436 aa17.63■□□□□ 0.41
TPM3-211ENST00000368531 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms