RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 PRDM11Q9NQV5 511 aa22.09■■□□□ 1.13
LMNA-207ENST00000368301 SNRPA1P09661 255 aaKnown RBP22.09■■□□□ 1.13
LMNA-207ENST00000368301 LARP1Q6PKG0 1096 aaKnown RBP22.09■■□□□ 1.13
LMNA-207ENST00000368301 GBP4Q96PP9 640 aa22.08■■□□□ 1.13
LMNA-207ENST00000368301 STRCQ7RTU9 1775 aa22.08■■□□□ 1.13
LMNA-207ENST00000368301 EPHA10Q5JZY3 1008 aa22.08■■□□□ 1.13
LMNA-207ENST00000368301 KLHDC4Q8TBB5 520 aa22.08■■□□□ 1.13
LMNA-207ENST00000368301 USP42Q9H9J4 1324 aaKnown RBP22.08■■□□□ 1.13
LMNA-207ENST00000368301 CLASRPQ8N2M8 674 aaKnown RBP22.07■■□□□ 1.12
LMNA-207ENST00000368301 FMNL2Q96PY5 1086 aa22.07■■□□□ 1.12
LMNA-207ENST00000368301 SASH1O94885 1247 aa22.07■■□□□ 1.12
LMNA-207ENST00000368301 GCKRQ14397 625 aa22.06■■□□□ 1.12
LMNA-207ENST00000368301 TOM1L2Q6ZVM7 507 aa22.06■■□□□ 1.12
LMNA-207ENST00000368301 METTL22Q9BUU2 404 aaPredicted RBP22.06■■□□□ 1.12
LMNA-207ENST00000368301 SIL1Q9H173 461 aa22.06■■□□□ 1.12
LMNA-207ENST00000368301 SLAIN2Q9P270 581 aa22.06■■□□□ 1.12
LMNA-207ENST00000368301 GLI3P10071 1580 aa22.06■■□□□ 1.12
LMNA-207ENST00000368301 MCCP23508 829 aa22.06■■□□□ 1.12
LMNA-207ENST00000368301 WDR17Q8IZU2 1322 aa22.05■■□□□ 1.12
LMNA-207ENST00000368301 ANKRD13DQ6ZTN6 518 aa22.05■■□□□ 1.12
LMNA-207ENST00000368301 NOL8Q76FK4 1167 aaKnown RBP22.05■■□□□ 1.12
LMNA-207ENST00000368301 CNTROBQ8N137 903 aa22.05■■□□□ 1.12
LMNA-207ENST00000368301 SOS2Q07890 1332 aaPredicted RBP22.05■■□□□ 1.12
LMNA-207ENST00000368301 SGSM2O43147 1006 aa22.05■■□□□ 1.12
LMNA-207ENST00000368301 NEXNQ0ZGT2 675 aa22.05■■□□□ 1.12
LMNA-207ENST00000368301 AACSQ86V21 672 aa22.05■■□□□ 1.12
LMNA-207ENST00000368301 UPF3BQ9BZI7 483 aaKnown RBP22.05■■□□□ 1.12
LMNA-207ENST00000368301 TTC41PQ6P2S7 1318 aa22.04■■□□□ 1.12
LMNA-207ENST00000368301 TMX3Q96JJ7 454 aa22.04■■□□□ 1.12
LMNA-207ENST00000368301 GLRX3O76003 335 aaKnown RBP22.04■■□□□ 1.12
LMNA-207ENST00000368301 CWC27Q6UX04 472 aaKnown RBP22.04■■□□□ 1.12
LMNA-207ENST00000368301 BAG4O95429 457 aaKnown RBP22.03■■□□□ 1.12
LMNA-207ENST00000368301 CYP2E1P05181 493 aaPredicted RBP22.03■■□□□ 1.12
LMNA-207ENST00000368301 IFIT2P09913 472 aaKnown RBP22.03■■□□□ 1.12
LMNA-207ENST00000368301 TLR7Q9NYK1 1049 aaKnown RBP22.03■■□□□ 1.12
LMNA-207ENST00000368301 HDAC5Q9UQL6 1122 aa22.03■■□□□ 1.12
LMNA-207ENST00000368301 ANAPC15P60006 121 aa22.03■■□□□ 1.12
LMNA-207ENST00000368301 ZCRB1Q8TBF4 217 aaKnown RBP22.03■■□□□ 1.12
LMNA-207ENST00000368301 EAF2Q96CJ1 260 aaPredicted RBP22.03■■□□□ 1.12
LMNA-207ENST00000368301 ECHDC1Q9NTX5 307 aa22.03■■□□□ 1.12
LMNA-207ENST00000368301 COL5A2P05997 1499 aaPredicted RBP22.02■■□□□ 1.12
LMNA-207ENST00000368301 ATP5J2-PTCD1G3V325 749 aa22.02■■□□□ 1.12
LMNA-207ENST00000368301 PTCD1O75127 700 aaKnown RBP22.02■■□□□ 1.12
LMNA-207ENST00000368301 ERC1Q8IUD2 1116 aa22.02■■□□□ 1.12
LMNA-207ENST00000368301 CCDC8Q9H0W5 538 aaPredicted RBP22.02■■□□□ 1.12
LMNA-207ENST00000368301 KDM4FA0A1W2PPD8 638 aa22.02■■□□□ 1.12
LMNA-207ENST00000368301 HSPA4P34932 840 aa22.02■■□□□ 1.12
LMNA-207ENST00000368301 LSG1Q9H089 658 aaKnown RBP22.02■■□□□ 1.12
LMNA-207ENST00000368301 PLEKHG2Q9H7P9 1386 aa22.02■■□□□ 1.12
LMNA-207ENST00000368301 G3BP1Q13283 466 aaKnown RBP eCLIP22.01■■□□□ 1.117e-9■■■□□ 16
LMNA-207ENST00000368301 RTN4Q9NQC3 1192 aaKnown RBP22.01■■□□□ 1.11
LMNA-207ENST00000368301 ZDHHC9Q9Y397 364 aa22.01■■□□□ 1.11
LMNA-207ENST00000368301 FSD2A1L4K1 749 aa22.01■■□□□ 1.11
LMNA-207ENST00000368301 RAD50Q92878 1312 aa22■■□□□ 1.11
LMNA-207ENST00000368301 CLEC17AQ6ZS10 378 aa22■■□□□ 1.11
LMNA-207ENST00000368301 STRN4Q9NRL3 753 aa22■■□□□ 1.11
LMNA-207ENST00000368301 NBPF26B4DH59 902 aa22■■□□□ 1.11
LMNA-207ENST00000368301 NBPF14Q5TI25 921 aa22■■□□□ 1.11
LMNA-207ENST00000368301 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
LMNA-207ENST00000368301 NBPF15Q8N660 670 aa22■■□□□ 1.11
LMNA-207ENST00000368301 IL17RAQ96F46 866 aa22■■□□□ 1.11
LMNA-207ENST00000368301 PARP4Q9UKK3 1724 aaKnown RBP22■■□□□ 1.11
LMNA-207ENST00000368301 NUCB2P80303 420 aa21.99■■□□□ 1.11
LMNA-207ENST00000368301 UBE3BQ7Z3V4 1068 aa21.99■■□□□ 1.11
LMNA-207ENST00000368301 CHAMP1Q96JM3 812 aa21.99■■□□□ 1.11
LMNA-207ENST00000368301 CWC22Q9HCG8 908 aaKnown RBP21.99■■□□□ 1.11
LMNA-207ENST00000368301 PCDH11XQ9BZA7 1347 aa21.99■■□□□ 1.11
LMNA-207ENST00000368301 PCDH11YQ9BZA8 1340 aa21.99■■□□□ 1.11
LMNA-207ENST00000368301 RASEFQ8IZ41 740 aa21.99■■□□□ 1.11
LMNA-207ENST00000368301 DDX54Q8TDD1 881 aaKnown RBP21.99■■□□□ 1.11
LMNA-207ENST00000368301 ARFGEF2Q9Y6D5 1785 aa21.98■■□□□ 1.11
LMNA-207ENST00000368301 GOLGA6L3A6NEY3 463 aa21.98■■□□□ 1.11
LMNA-207ENST00000368301 AFDNP55196 1824 aaKnown RBP21.98■■□□□ 1.11
LMNA-207ENST00000368301 SNX14Q9Y5W7 946 aa21.98■■□□□ 1.11
LMNA-207ENST00000368301 DIAPH3Q9NSV4 1193 aa21.97■■□□□ 1.11
LMNA-207ENST00000368301 ABCA3Q99758 1704 aa21.97■■□□□ 1.11
LMNA-207ENST00000368301 XRCC6P12956 609 aaKnown RBP eCLIP21.97■■□□□ 1.116e-7■■■■□ 20.4
LMNA-207ENST00000368301 MCTP1Q6DN14 999 aa21.97■■□□□ 1.11
LMNA-207ENST00000368301 GPATCH3Q96I76 525 aa21.97■■□□□ 1.11
LMNA-207ENST00000368301 LAMB4A4D0S4 1761 aa21.96■■□□□ 1.11
LMNA-207ENST00000368301 PTH1RQ03431 593 aa21.96■■□□□ 1.11
LMNA-207ENST00000368301 FOXD4L5Q5VV16 416 aaPredicted RBP21.96■■□□□ 1.11
LMNA-207ENST00000368301 TTLL7Q6ZT98 887 aa21.96■■□□□ 1.11
LMNA-207ENST00000368301 FOXD4L4Q8WXT5 416 aaPredicted RBP21.96■■□□□ 1.11
LMNA-207ENST00000368301 A1BGP04217 495 aa21.96■■□□□ 1.11
LMNA-207ENST00000368301 RFX5P48382 616 aaPredicted RBP21.96■■□□□ 1.11
LMNA-207ENST00000368301 CUL4AQ13619 759 aa21.96■■□□□ 1.11
LMNA-207ENST00000368301 L1TD1Q5T7N2 865 aaKnown RBP21.96■■□□□ 1.11
LMNA-207ENST00000368301 IL2RBP14784 551 aa21.95■■□□□ 1.1
LMNA-207ENST00000368301 MCM2P49736 904 aa21.95■■□□□ 1.1
LMNA-207ENST00000368301 CARD10Q9BWT7 1032 aa21.95■■□□□ 1.1
LMNA-207ENST00000368301 A0A087WZG4 1122 aa21.95■■□□□ 1.1
LMNA-207ENST00000368301 PLBD2Q8NHP8 589 aa21.95■■□□□ 1.1
LMNA-207ENST00000368301 EPB41L2O43491 1005 aaKnown RBP21.94■■□□□ 1.1
LMNA-207ENST00000368301 PANK2Q9BZ23 570 aa21.94■■□□□ 1.1
LMNA-207ENST00000368301 BOLA2Q9H3K6 86 aa21.94■■□□□ 1.1
LMNA-207ENST00000368301 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
LMNA-207ENST00000368301 PTPN12Q05209 780 aaKnown RBP21.94■■□□□ 1.1
LMNA-207ENST00000368301 KIAA1211Q6ZU35 1233 aa21.94■■□□□ 1.1
LMNA-207ENST00000368301 KCPQ6ZWJ8 1503 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms