RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 KANK4Q5T7N3 995 aaPredicted RBP9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 DESI1Q6ICB0 168 aa9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 RNF19BQ6ZMZ0 732 aa9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 PRR7Q8TB68 274 aa9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 SYMPKQ92797 1274 aaKnown RBP9.23□□□□□ -0.93
ECHDC1-202ENST00000368289 RGPD3A6NKT7 1758 aaPredicted RBP9.22□□□□□ -0.93
ECHDC1-202ENST00000368289 RGPD4Q7Z3J3 1758 aa9.22□□□□□ -0.93
ECHDC1-202ENST00000368289 ITGBL1O95965 494 aaPredicted RBP9.22□□□□□ -0.93
ECHDC1-202ENST00000368289 PDE3BQ13370 1112 aa9.22□□□□□ -0.93
ECHDC1-202ENST00000368289 USP35Q9P2H5 1018 aa9.22□□□□□ -0.93
ECHDC1-202ENST00000368289 TIMELESSQ9UNS1 1208 aa9.22□□□□□ -0.93
ECHDC1-202ENST00000368289 AP1G2O75843 785 aa9.21□□□□□ -0.94
ECHDC1-202ENST00000368289 CHRNA2Q15822 529 aa9.21□□□□□ -0.94
ECHDC1-202ENST00000368289 TXNRD1Q16881 649 aa9.21□□□□□ -0.94
ECHDC1-202ENST00000368289 TSC1Q92574 1164 aa9.21□□□□□ -0.94
ECHDC1-202ENST00000368289 ZNF516Q92618 1163 aa9.21□□□□□ -0.94
ECHDC1-202ENST00000368289 ARHGEF10O15013 1369 aa9.21□□□□□ -0.94
ECHDC1-202ENST00000368289 APBB1O00213 710 aa9.2□□□□□ -0.94
ECHDC1-202ENST00000368289 DHX57Q6P158 1386 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-202ENST00000368289 PHRF1Q9P1Y6 1649 aaKnown RBP9.2□□□□□ -0.94
ECHDC1-202ENST00000368289 ZNF827Q17R98 1081 aa9.19□□□□□ -0.94
ECHDC1-202ENST00000368289 LARP1Q6PKG0 1096 aaKnown RBP9.19□□□□□ -0.94
ECHDC1-202ENST00000368289 SLC6A16Q9GZN6 736 aa9.19□□□□□ -0.94
ECHDC1-202ENST00000368289 STRN4Q9NRL3 753 aa9.19□□□□□ -0.94
ECHDC1-202ENST00000368289 STK32BQ9NY57 414 aa9.19□□□□□ -0.94
ECHDC1-202ENST00000368289 ANKRD30AQ9BXX3 1397 aa9.19□□□□□ -0.94
ECHDC1-202ENST00000368289 NRXN1Q9ULB1 1477 aa9.19□□□□□ -0.94
ECHDC1-202ENST00000368289 CFAP99D6REC4 459 aa9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 GRIN3BO60391 1043 aa9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 JUNDP17535 347 aa9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 GGCXP38435 758 aa9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 ZNF326Q5BKZ1 582 aaKnown RBP9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 SBF2Q86WG5 1849 aa9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 KIAA0232Q92628 1395 aa9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 WDR90Q96KV7 1748 aa9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
ECHDC1-202ENST00000368289 FMN2Q9NZ56 1722 aa9.17□□□□□ -0.94
ECHDC1-202ENST00000368289 KIF1AQ12756 1690 aa9.17□□□□□ -0.94
ECHDC1-202ENST00000368289 TLL1O43897 1013 aa9.17□□□□□ -0.94
ECHDC1-202ENST00000368289 HSPA1AP0DMV8 641 aaKnown RBP9.17□□□□□ -0.94
ECHDC1-202ENST00000368289 HSPA1BP0DMV9 641 aaKnown RBP9.17□□□□□ -0.94
ECHDC1-202ENST00000368289 PSME1Q06323 249 aa9.17□□□□□ -0.94
ECHDC1-202ENST00000368289 PRM3Q9NNZ6 103 aa9.17□□□□□ -0.94
ECHDC1-202ENST00000368289 COL24A1Q17RW2 1714 aa9.17□□□□□ -0.94
ECHDC1-202ENST00000368289 SSH2Q76I76 1423 aa9.16□□□□□ -0.94
ECHDC1-202ENST00000368289 ANKRD50Q9ULJ7 1429 aa9.16□□□□□ -0.94
ECHDC1-202ENST00000368289 FAM160A2Q8N612 972 aaPredicted RBP9.16□□□□□ -0.94
ECHDC1-202ENST00000368289 PRDM11Q9NQV5 511 aa9.16□□□□□ -0.94
ECHDC1-202ENST00000368289 RGPD8O14715 1765 aaPredicted RBP9.16□□□□□ -0.94
ECHDC1-202ENST00000368289 TRPM3Q9HCF6 1732 aaPredicted RBP9.16□□□□□ -0.94
ECHDC1-202ENST00000368289 PAPPAQ13219 1627 aa9.16□□□□□ -0.94
ECHDC1-202ENST00000368289 TOMM70O94826 608 aa9.15□□□□□ -0.94
ECHDC1-202ENST00000368289 USP17L8P0C7I0 530 aa9.15□□□□□ -0.94
ECHDC1-202ENST00000368289 MMP16P51512 607 aa9.15□□□□□ -0.94
ECHDC1-202ENST00000368289 CTDSPL2Q05D32 466 aa9.15□□□□□ -0.94
ECHDC1-202ENST00000368289 LYPD8Q6UX82 237 aa9.15□□□□□ -0.94
ECHDC1-202ENST00000368289 TCP11L2Q8N4U5 519 aa9.15□□□□□ -0.94
ECHDC1-202ENST00000368289 MARCH10Q8NA82 808 aaPredicted RBP9.15□□□□□ -0.94
ECHDC1-202ENST00000368289 ALS2Q96Q42 1657 aa9.15□□□□□ -0.94
ECHDC1-202ENST00000368289 ATP7BP35670 1465 aa9.15□□□□□ -0.95
ECHDC1-202ENST00000368289 OVOS2A0A0G2JMS6 1433 aa9.14□□□□□ -0.95
ECHDC1-202ENST00000368289 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
ECHDC1-202ENST00000368289 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
ECHDC1-202ENST00000368289 DXOO77932 396 aaKnown RBP9.14□□□□□ -0.95
ECHDC1-202ENST00000368289 PTPRNQ16849 979 aa9.14□□□□□ -0.95
ECHDC1-202ENST00000368289 PMFBP1Q8TBY8 1022 aa9.14□□□□□ -0.95
ECHDC1-202ENST00000368289 PDE4DIPQ5VU43 2346 aa9.14□□□□□ -0.95
ECHDC1-202ENST00000368289 AATKQ6ZMQ8 1374 aa9.13□□□□□ -0.95
ECHDC1-202ENST00000368289 NKX2-3Q8TAU0 364 aa9.13□□□□□ -0.95
ECHDC1-202ENST00000368289 LRRC4BQ9NT99 713 aa9.13□□□□□ -0.95
ECHDC1-202ENST00000368289 ZC3H6P61129 1189 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-202ENST00000368289 NEUROD1Q13562 356 aa9.12□□□□□ -0.95
ECHDC1-202ENST00000368289 PNMA1Q8ND90 353 aa9.12□□□□□ -0.95
ECHDC1-202ENST00000368289 NMRK2Q9NPI5 230 aa9.12□□□□□ -0.95
ECHDC1-202ENST00000368289 STK26Q9P289 416 aa9.12□□□□□ -0.95
ECHDC1-202ENST00000368289 PARP4Q9UKK3 1724 aaKnown RBP9.11□□□□□ -0.95
ECHDC1-202ENST00000368289 S1PR4O95977 384 aa9.11□□□□□ -0.95
ECHDC1-202ENST00000368289 MCM6Q14566 821 aa9.11□□□□□ -0.95
ECHDC1-202ENST00000368289 NUDT12Q9BQG2 462 aa9.11□□□□□ -0.95
ECHDC1-202ENST00000368289 BCL9O00512 1426 aa9.11□□□□□ -0.95
ECHDC1-202ENST00000368289 PNPLA7Q6ZV29 1317 aa9.1□□□□□ -0.95
ECHDC1-202ENST00000368289 RAD21O60216 631 aa9.1□□□□□ -0.95
ECHDC1-202ENST00000368289 CCNYL3P0C7X3 344 aa9.1□□□□□ -0.95
ECHDC1-202ENST00000368289 PRDM9Q9NQV7 894 aa9.1□□□□□ -0.95
ECHDC1-202ENST00000368289 SNRKQ9NRH2 765 aa9.1□□□□□ -0.95
ECHDC1-202ENST00000368289 PLA2G2EQ9NZK7 142 aa9.1□□□□□ -0.95
ECHDC1-202ENST00000368289 CLTCL1P53675 1640 aa9.09□□□□□ -0.95
ECHDC1-202ENST00000368289 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.09□□□□□ -0.95
ECHDC1-202ENST00000368289 EVA1BQ9NVM1 165 aa9.09□□□□□ -0.95
ECHDC1-202ENST00000368289 ABCC11Q96J66 1382 aa9.09□□□□□ -0.95
ECHDC1-202ENST00000368289 PER1O15534 1290 aaPredicted RBP9.08□□□□□ -0.96
ECHDC1-202ENST00000368289 CTHP32929 405 aa9.08□□□□□ -0.96
ECHDC1-202ENST00000368289 RGS19P49795 217 aa9.08□□□□□ -0.96
ECHDC1-202ENST00000368289 TMEM132EQ6IEE7 984 aa9.08□□□□□ -0.96
ECHDC1-202ENST00000368289 CCDC24Q8N4L8 307 aa9.08□□□□□ -0.96
ECHDC1-202ENST00000368289 LRRN4Q8WUT4 740 aa9.08□□□□□ -0.96
ECHDC1-202ENST00000368289 THRAP3Q9Y2W1 955 aaKnown RBP9.08□□□□□ -0.96
ECHDC1-202ENST00000368289 LRRC37A3O60309 1634 aa9.08□□□□□ -0.96
ECHDC1-202ENST00000368289 PRR36Q9H6K5 1346 aa9.07□□□□□ -0.96
ECHDC1-202ENST00000368289 LMO7Q8WWI1 1683 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms