RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 FAM227BQ96M60 508 aa13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
NECTIN4-201ENST00000368012 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 ZNF500O60304 480 aaPredicted RBP13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 KRT85P78386 507 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 CCDC186Q7Z3E2 898 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 MAP2P11137 1827 aaKnown RBP13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 BTBD11A6QL63 1104 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 LRRC59Q96AG4 307 aaKnown RBP13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 DACT1Q9NYF0 836 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 BLOC1S2Q6QNY1 142 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 ZNF771Q7L3S4 317 aaPredicted RBP13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 DNAAF4Q8WXU2 420 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 AMOTL2Q9Y2J4 779 aa13.13□□□□□ -0.31
NECTIN4-201ENST00000368012 C1orf141Q5JVX7 400 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 PDCL2Q8N4E4 241 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 CPS1P31327 1500 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 LRMPQ12912 555 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 MAP3K11Q16584 847 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 RAB11FIP4Q86YS3 637 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 MAP3K2Q9Y2U5 619 aa13.12□□□□□ -0.31
NECTIN4-201ENST00000368012 PSME1Q06323 249 aa13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 PDLIM2Q96JY6 352 aa13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 PYCARDQ9ULZ3 195 aa13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 RBM8AQ9Y5S9 174 aaKnown RBP13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 IBTKQ9P2D0 1353 aaPredicted RBP13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 RGS12O14924 1447 aa13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 MYO5BQ9ULV0 1848 aa13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 SGSM2O43147 1006 aa13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 GLRX3O76003 335 aaKnown RBP13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 ARHGAP31Q2M1Z3 1444 aa13.11□□□□□ -0.31
NECTIN4-201ENST00000368012 HSPA4P34932 840 aa13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 SF3A1Q15459 793 aaKnown RBP13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 ANO6Q4KMQ2 910 aa13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 INTS4Q96HW7 963 aaKnown RBP13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 CCT2P78371 535 aaKnown RBP13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 GORABQ5T7V8 394 aa13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 DNAJC25Q9H1X3 360 aa13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 LIG1P18858 919 aa13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 U2AF2P26368 475 aaKnown RBP eCLIP13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 ANAPC15P60006 121 aa13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 ISM2Q6H9L7 571 aa13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 ECHDC1Q9NTX5 307 aa13.1□□□□□ -0.31
NECTIN4-201ENST00000368012 ATP7BP35670 1465 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 CDK12Q9NYV4 1490 aaPredicted RBP13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 CSB-PGBD3P0DP91 1061 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 MCM5P33992 734 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 CDC37L1Q7L3B6 337 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 CHST3Q7LGC8 479 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 CCDC85AQ96PX6 553 aaPredicted RBP13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 NRBP1Q9UHY1 535 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 HSP90AB4PQ58FF6 505 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 AATKQ6ZMQ8 1374 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 RIOK3O14730 519 aaKnown RBP13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 LETM1O95202 739 aaPredicted RBP13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 CUL4AQ13619 759 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 ME3Q16798 604 aa13.09□□□□□ -0.31
NECTIN4-201ENST00000368012 CPSF1Q10570 1443 aaKnown RBP13.08□□□□□ -0.31
NECTIN4-201ENST00000368012 ESCO1Q5FWF5 840 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 RNF20Q5VTR2 975 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 KNDC1Q76NI1 1749 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 DIP2CQ9Y2E4 1556 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 PRAMEF22A3QJZ6 481 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 SDF4Q9BRK5 362 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 KIF24Q5T7B8 1368 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 ZNF165P49910 485 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 LARP1Q6PKG0 1096 aaKnown RBP13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
NECTIN4-201ENST00000368012 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
NECTIN4-201ENST00000368012 TNNT1P13805 278 aa13.07□□□□□ -0.32
NECTIN4-201ENST00000368012 NAA30Q147X3 362 aaPredicted RBP13.07□□□□□ -0.32
NECTIN4-201ENST00000368012 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 JAK2O60674 1132 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 PTCD1O75127 700 aaKnown RBP13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 ME1P48163 572 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 TYRO3Q06418 890 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 FAM177A1Q8N128 213 aaPredicted RBP13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 OSBPL3Q9H4L5 887 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 RAD50Q92878 1312 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 BIN1O00499 593 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 MTERF4Q7Z6M4 381 aaKnown RBP13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 TTC6Q86TZ1 520 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 BCL2L12Q9HB09 334 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 RIMBP3CA6NJZ7 1639 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 RIMBP3BA6NNM3 1639 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 RIMBP3Q9UFD9 1639 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 PSMA5P28066 241 aa13.06□□□□□ -0.32
NECTIN4-201ENST00000368012 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms