RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 PRAMEF22A3QJZ6 481 aa16.32■□□□□ 0.2
LMX1A-203ENST00000367893 POLRMTO00411 1230 aaKnown RBP16.32■□□□□ 0.2
LMX1A-203ENST00000367893 COL15A1P39059 1388 aa16.31■□□□□ 0.2
LMX1A-203ENST00000367893 USPL1Q5W0Q7 1092 aa16.31■□□□□ 0.2
LMX1A-203ENST00000367893 SSH1Q8WYL5 1049 aa16.31■□□□□ 0.2
LMX1A-203ENST00000367893 TEX13AQ9BXU3 409 aaPredicted RBP16.31■□□□□ 0.2
LMX1A-203ENST00000367893 BCL2L12Q9HB09 334 aa16.31■□□□□ 0.2
LMX1A-203ENST00000367893 RNF123Q5XPI4 1314 aa16.31■□□□□ 0.2
LMX1A-203ENST00000367893 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
LMX1A-203ENST00000367893 NARFQ9UHQ1 456 aa16.3■□□□□ 0.2
LMX1A-203ENST00000367893 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
LMX1A-203ENST00000367893 USP16Q9Y5T5 823 aa16.3■□□□□ 0.2
LMX1A-203ENST00000367893 CEP350Q5VT06 3117 aa16.29■□□□□ 0.2
LMX1A-203ENST00000367893 ZPR1O75312 459 aa16.29■□□□□ 0.2
LMX1A-203ENST00000367893 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
LMX1A-203ENST00000367893 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
LMX1A-203ENST00000367893 BCAR3O75815 825 aa16.28■□□□□ 0.2
LMX1A-203ENST00000367893 EIF5P55010 431 aaKnown RBP16.28■□□□□ 0.2
LMX1A-203ENST00000367893 NFIXQ14938 502 aa16.28■□□□□ 0.2
LMX1A-203ENST00000367893 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
LMX1A-203ENST00000367893 EIF2S2P20042 333 aaKnown RBP16.27■□□□□ 0.2
LMX1A-203ENST00000367893 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
LMX1A-203ENST00000367893 STARD3NLO95772 234 aa16.26■□□□□ 0.19
LMX1A-203ENST00000367893 PDIA6Q15084 440 aa16.26■□□□□ 0.19
LMX1A-203ENST00000367893 GPBP1L1Q9HC44 474 aaPredicted RBP16.26■□□□□ 0.19
LMX1A-203ENST00000367893 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
LMX1A-203ENST00000367893 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
LMX1A-203ENST00000367893 DBF4Q9UBU7 674 aaPredicted RBP16.26■□□□□ 0.19
LMX1A-203ENST00000367893 CANXP27824 592 aaKnown RBP16.25■□□□□ 0.19
LMX1A-203ENST00000367893 CHRNA5P30532 468 aa16.25■□□□□ 0.19
LMX1A-203ENST00000367893 LRP10Q7Z4F1 713 aa16.25■□□□□ 0.19
LMX1A-203ENST00000367893 ZNF526Q8TF50 670 aaPredicted RBP16.25■□□□□ 0.19
LMX1A-203ENST00000367893 STK31Q9BXU1 1019 aa16.25■□□□□ 0.19
LMX1A-203ENST00000367893 PIM2Q9P1W9 311 aa16.25■□□□□ 0.19
LMX1A-203ENST00000367893 CHPF2Q9P2E5 772 aa16.25■□□□□ 0.19
LMX1A-203ENST00000367893 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
LMX1A-203ENST00000367893 NECTIN2Q92692 538 aa16.24■□□□□ 0.19
LMX1A-203ENST00000367893 BCL2L13Q9BXK5 485 aa16.24■□□□□ 0.19
LMX1A-203ENST00000367893 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
LMX1A-203ENST00000367893 KIF16BQ96L93 1317 aa16.24■□□□□ 0.19
LMX1A-203ENST00000367893 NBPF26B4DH59 902 aa16.23■□□□□ 0.19
LMX1A-203ENST00000367893 TCERG1O14776 1098 aaKnown RBP16.23■□□□□ 0.19
LMX1A-203ENST00000367893 NBPF10Q6P3W6 841 aaKnown RBP16.23■□□□□ 0.19
LMX1A-203ENST00000367893 ARHGAP27Q6ZUM4 889 aa16.23■□□□□ 0.19
LMX1A-203ENST00000367893 NBPF15Q8N660 670 aa16.23■□□□□ 0.19
LMX1A-203ENST00000367893 ARHGAP45Q92619 1136 aa16.23■□□□□ 0.19
LMX1A-203ENST00000367893 KIF3CO14782 793 aa16.22■□□□□ 0.19
LMX1A-203ENST00000367893 A1BGP04217 495 aa16.22■□□□□ 0.19
LMX1A-203ENST00000367893 SERPINB2P05120 415 aa16.22■□□□□ 0.19
LMX1A-203ENST00000367893 RRP1P56182 461 aaKnown RBP16.22■□□□□ 0.19
LMX1A-203ENST00000367893 PROSER3Q2NL68 480 aa16.22■□□□□ 0.19
LMX1A-203ENST00000367893 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
LMX1A-203ENST00000367893 HYPKQ9NX55 129 aa16.22■□□□□ 0.19
LMX1A-203ENST00000367893 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
LMX1A-203ENST00000367893 NRXN2Q9P2S2 1712 aa16.22■□□□□ 0.19
LMX1A-203ENST00000367893 A0A087WZG4 1122 aa16.21■□□□□ 0.19
LMX1A-203ENST00000367893 IL6STP40189 918 aaPredicted RBP16.21■□□□□ 0.19
LMX1A-203ENST00000367893 G2E3Q7L622 706 aa16.21■□□□□ 0.19
LMX1A-203ENST00000367893 PTPRCP08575 1304 aa16.21■□□□□ 0.19
LMX1A-203ENST00000367893 CARMIL3Q8ND23 1372 aa16.21■□□□□ 0.19
LMX1A-203ENST00000367893 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.2■□□□□ 0.18
LMX1A-203ENST00000367893 NOB1Q9ULX3 412 aaKnown RBP16.2■□□□□ 0.18
LMX1A-203ENST00000367893 IPO8O15397 1037 aaKnown RBP16.19■□□□□ 0.18
LMX1A-203ENST00000367893 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
LMX1A-203ENST00000367893 ANXA1P04083 346 aa16.19■□□□□ 0.18
LMX1A-203ENST00000367893 FLIIQ13045 1269 aa16.19■□□□□ 0.18
LMX1A-203ENST00000367893 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
LMX1A-203ENST00000367893 PHAXQ9H814 394 aaKnown RBP16.19■□□□□ 0.18
LMX1A-203ENST00000367893 TBC1D2BQ9UPU7 963 aa16.19■□□□□ 0.18
LMX1A-203ENST00000367893 C9orf131Q5VYM1 1079 aa16.19■□□□□ 0.18
LMX1A-203ENST00000367893 ZKSCAN2Q63HK3 967 aa16.19■□□□□ 0.18
LMX1A-203ENST00000367893 ATF7IPQ6VMQ6 1270 aa16.19■□□□□ 0.18
LMX1A-203ENST00000367893 PLIN1O60240 522 aa16.18■□□□□ 0.18
LMX1A-203ENST00000367893 TRIM27P14373 513 aa16.18■□□□□ 0.18
LMX1A-203ENST00000367893 PIP4K2AP48426 406 aaPredicted RBP16.18■□□□□ 0.18
LMX1A-203ENST00000367893 BICDL1Q6ZP65 573 aa16.18■□□□□ 0.18
LMX1A-203ENST00000367893 FRAT1Q92837 279 aaPredicted RBP16.18■□□□□ 0.18
LMX1A-203ENST00000367893 SCN7AQ01118 1682 aa16.17■□□□□ 0.18
LMX1A-203ENST00000367893 MYL6BP14649 208 aa16.17■□□□□ 0.18
LMX1A-203ENST00000367893 PDE3AQ14432 1141 aa16.17■□□□□ 0.18
LMX1A-203ENST00000367893 COPS6Q7L5N1 327 aa16.17■□□□□ 0.18
LMX1A-203ENST00000367893 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
LMX1A-203ENST00000367893 PRELPP51888 382 aa16.16■□□□□ 0.18
LMX1A-203ENST00000367893 PRR5LQ6MZQ0 368 aa16.16■□□□□ 0.18
LMX1A-203ENST00000367893 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
LMX1A-203ENST00000367893 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
LMX1A-203ENST00000367893 ARFGEF1Q9Y6D6 1849 aa16.15■□□□□ 0.18
LMX1A-203ENST00000367893 ARFGEF2Q9Y6D5 1785 aa16.15■□□□□ 0.18
LMX1A-203ENST00000367893 ABCC4O15439 1325 aa16.15■□□□□ 0.18
LMX1A-203ENST00000367893 AFDNP55196 1824 aaKnown RBP16.15■□□□□ 0.18
LMX1A-203ENST00000367893 MS4A1P11836 297 aa16.15■□□□□ 0.18
LMX1A-203ENST00000367893 FKBP5Q13451 457 aaPredicted RBP16.15■□□□□ 0.18
LMX1A-203ENST00000367893 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
LMX1A-203ENST00000367893 NMRK2Q9NPI5 230 aa16.15■□□□□ 0.18
LMX1A-203ENST00000367893 DDX58O95786 925 aaKnown RBP16.14■□□□□ 0.17
LMX1A-203ENST00000367893 HSPA6P17066 643 aa16.14■□□□□ 0.17
LMX1A-203ENST00000367893 RASSF7Q02833 373 aa16.14■□□□□ 0.17
LMX1A-203ENST00000367893 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
LMX1A-203ENST00000367893 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
LMX1A-203ENST00000367893 DZIP3Q86Y13 1208 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms