RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 CNTROBQ8N137 903 aa20.25■□□□□ 0.83
VAMP4-202ENST00000367740 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
VAMP4-202ENST00000367740 BCORQ6W2J9 1755 aa20.23■□□□□ 0.83
VAMP4-202ENST00000367740 SOGA3Q5TF21 947 aa20.23■□□□□ 0.83
VAMP4-202ENST00000367740 STYK1Q6J9G0 422 aa20.23■□□□□ 0.83
VAMP4-202ENST00000367740 CNKSR1Q969H4 720 aa20.23■□□□□ 0.83
VAMP4-202ENST00000367740 RNF123Q5XPI4 1314 aa20.23■□□□□ 0.83
VAMP4-202ENST00000367740 CANXP27824 592 aaKnown RBP20.22■□□□□ 0.83
VAMP4-202ENST00000367740 CAPNS2Q96L46 248 aa20.22■□□□□ 0.83
VAMP4-202ENST00000367740 CFAP44Q96MT7 982 aa20.22■□□□□ 0.83
VAMP4-202ENST00000367740 TSKSQ9UJT2 592 aa20.22■□□□□ 0.83
VAMP4-202ENST00000367740 CASP8AP2Q9UKL3 1982 aa20.22■□□□□ 0.83
VAMP4-202ENST00000367740 SRGNP10124 158 aa20.21■□□□□ 0.83
VAMP4-202ENST00000367740 EIF5P55010 431 aaKnown RBP20.21■□□□□ 0.83
VAMP4-202ENST00000367740 PNMA8AQ86V59 439 aaPredicted RBP20.21■□□□□ 0.83
VAMP4-202ENST00000367740 BEGAINQ9BUH8 593 aa20.21■□□□□ 0.83
VAMP4-202ENST00000367740 DDX21Q9NR30 783 aaKnown RBP eCLIP20.21■□□□□ 0.83
VAMP4-202ENST00000367740 MCOLN1Q9GZU1 580 aa20.2■□□□□ 0.82
VAMP4-202ENST00000367740 LGR6Q9HBX8 967 aa20.2■□□□□ 0.82
VAMP4-202ENST00000367740 AKAP4Q5JQC9 854 aa20.19■□□□□ 0.82
VAMP4-202ENST00000367740 CYP4F22Q6NT55 531 aa20.19■□□□□ 0.82
VAMP4-202ENST00000367740 VSIG10Q8N0Z9 540 aa20.19■□□□□ 0.82
VAMP4-202ENST00000367740 C7orf43Q8WVR3 580 aa20.19■□□□□ 0.82
VAMP4-202ENST00000367740 ECE1P42892 770 aa20.18■□□□□ 0.82
VAMP4-202ENST00000367740 FMR1Q06787 632 aaKnown RBP eCLIP20.18■□□□□ 0.82
VAMP4-202ENST00000367740 CCDC93Q567U6 631 aa20.18■□□□□ 0.82
VAMP4-202ENST00000367740 SULT6B1Q6IMI4 303 aa20.18■□□□□ 0.82
VAMP4-202ENST00000367740 PAXIP1Q6ZW49 1069 aaPredicted RBP20.18■□□□□ 0.82
VAMP4-202ENST00000367740 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
VAMP4-202ENST00000367740 MASTLQ96GX5 879 aa20.18■□□□□ 0.82
VAMP4-202ENST00000367740 GPR101Q96P66 508 aaPredicted RBP20.18■□□□□ 0.82
VAMP4-202ENST00000367740 ZNF277Q9NRM2 450 aaPredicted RBP20.18■□□□□ 0.82
VAMP4-202ENST00000367740 A0A087WZG4 1122 aa20.17■□□□□ 0.82
VAMP4-202ENST00000367740 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.82
VAMP4-202ENST00000367740 GRM1Q13255 1194 aa20.17■□□□□ 0.82
VAMP4-202ENST00000367740 PPP4R3CPQ6ZMV5 832 aa20.17■□□□□ 0.82
VAMP4-202ENST00000367740 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
VAMP4-202ENST00000367740 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
VAMP4-202ENST00000367740 FZD9O00144 591 aa20.14■□□□□ 0.81
VAMP4-202ENST00000367740 ST5P78524 1137 aa20.14■□□□□ 0.81
VAMP4-202ENST00000367740 COL4A5P29400 1685 aa20.13■□□□□ 0.81
VAMP4-202ENST00000367740 AOC2O75106 756 aa20.13■□□□□ 0.81
VAMP4-202ENST00000367740 OLFM4Q6UX06 510 aa20.13■□□□□ 0.81
VAMP4-202ENST00000367740 GPC2Q8N158 579 aa20.13■□□□□ 0.81
VAMP4-202ENST00000367740 NPHP1O15259 732 aa20.12■□□□□ 0.81
VAMP4-202ENST00000367740 STARD3NLO95772 234 aa20.12■□□□□ 0.81
VAMP4-202ENST00000367740 CST9Q5W186 159 aa20.12■□□□□ 0.81
VAMP4-202ENST00000367740 SETDB2Q96T68 719 aa20.12■□□□□ 0.81
VAMP4-202ENST00000367740 TLL2Q9Y6L7 1015 aa20.12■□□□□ 0.81
VAMP4-202ENST00000367740 SNED1Q8TER0 1413 aa20.11■□□□□ 0.81
VAMP4-202ENST00000367740 SIPA1L3O60292 1781 aaPredicted RBP20.11■□□□□ 0.81
VAMP4-202ENST00000367740 MAP2K2P36507 400 aa20.11■□□□□ 0.81
VAMP4-202ENST00000367740 IARSP41252 1262 aaKnown RBP20.11■□□□□ 0.81
VAMP4-202ENST00000367740 ZNF330Q9Y3S2 320 aaPredicted RBP20.11■□□□□ 0.81
VAMP4-202ENST00000367740 CA12O43570 354 aa20.1■□□□□ 0.81
VAMP4-202ENST00000367740 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
VAMP4-202ENST00000367740 DGKZQ13574 1117 aa20.1■□□□□ 0.81
VAMP4-202ENST00000367740 TRAF5O00463 557 aa20.09■□□□□ 0.81
VAMP4-202ENST00000367740 NPR1P16066 1061 aa20.08■□□□□ 0.81
VAMP4-202ENST00000367740 IL13P35225 146 aa20.08■□□□□ 0.81
VAMP4-202ENST00000367740 IL6STP40189 918 aaPredicted RBP20.08■□□□□ 0.81
VAMP4-202ENST00000367740 RTKN2Q8IZC4 609 aa20.08■□□□□ 0.81
VAMP4-202ENST00000367740 HEG1Q9ULI3 1381 aa20.08■□□□□ 0.8
VAMP4-202ENST00000367740 SCNN1DP51172 638 aa20.06■□□□□ 0.8
VAMP4-202ENST00000367740 BRPF1P55201 1214 aaPredicted RBP20.06■□□□□ 0.8
VAMP4-202ENST00000367740 TTC5Q8N0Z6 440 aa20.06■□□□□ 0.8
VAMP4-202ENST00000367740 SYNE4Q8N205 404 aa20.06■□□□□ 0.8
VAMP4-202ENST00000367740 ZNF496Q96IT1 587 aaPredicted RBP20.06■□□□□ 0.8
VAMP4-202ENST00000367740 KLRG2A4D1S0 409 aaPredicted RBP20.05■□□□□ 0.8
VAMP4-202ENST00000367740 LMOD1P29536 600 aaPredicted RBP20.05■□□□□ 0.8
VAMP4-202ENST00000367740 EPS15P42566 896 aa20.05■□□□□ 0.8
VAMP4-202ENST00000367740 SAPCD2Q86UD0 394 aa20.05■□□□□ 0.8
VAMP4-202ENST00000367740 GJA3Q9Y6H8 435 aa20.05■□□□□ 0.8
VAMP4-202ENST00000367740 PRPF38BQ5VTL8 546 aaKnown RBP20.04■□□□□ 0.8
VAMP4-202ENST00000367740 NBPF5PQ86XG9 351 aaPredicted RBP20.04■□□□□ 0.8
VAMP4-202ENST00000367740 SOX10P56693 466 aa20.03■□□□□ 0.8
VAMP4-202ENST00000367740 JDP2Q8WYK2 163 aa20.03■□□□□ 0.8
VAMP4-202ENST00000367740 A1BGP04217 495 aa20.02■□□□□ 0.8
VAMP4-202ENST00000367740 MTHFSDQ2M296 383 aaKnown RBP20.02■□□□□ 0.8
VAMP4-202ENST00000367740 USP50Q70EL3 339 aaPredicted RBP20.02■□□□□ 0.8
VAMP4-202ENST00000367740 DZIP3Q86Y13 1208 aaKnown RBP20.02■□□□□ 0.8
VAMP4-202ENST00000367740 PSMD1Q99460 953 aa20.02■□□□□ 0.8
VAMP4-202ENST00000367740 TEX13AQ9BXU3 409 aaPredicted RBP20.02■□□□□ 0.8
VAMP4-202ENST00000367740 EIF6P56537 245 aaKnown RBP20.01■□□□□ 0.79
VAMP4-202ENST00000367740 CIAPIN1Q6FI81 312 aa20.01■□□□□ 0.79
VAMP4-202ENST00000367740 HMOX1P09601 288 aa20■□□□□ 0.79
VAMP4-202ENST00000367740 ZNF790Q6PG37 636 aa20■□□□□ 0.79
VAMP4-202ENST00000367740 HHIPL1Q96JK4 782 aa20■□□□□ 0.79
VAMP4-202ENST00000367740 CELF2O95319 508 aaKnown RBP19.99■□□□□ 0.79
VAMP4-202ENST00000367740 POLR3GLQ9BT43 218 aa19.99■□□□□ 0.79
VAMP4-202ENST00000367740 NPM2Q86SE8 214 aaKnown RBP19.98■□□□□ 0.79
VAMP4-202ENST00000367740 MORC1Q86VD1 984 aa19.98■□□□□ 0.79
VAMP4-202ENST00000367740 ALDH1B1P30837 517 aa19.97■□□□□ 0.79
VAMP4-202ENST00000367740 CLEC4GQ6UXB4 293 aa19.97■□□□□ 0.79
VAMP4-202ENST00000367740 PIP4K2AP48426 406 aaPredicted RBP19.96■□□□□ 0.79
VAMP4-202ENST00000367740 ZIC5Q96T25 663 aa19.96■□□□□ 0.79
VAMP4-202ENST00000367740 GLIS2Q9BZE0 524 aaPredicted RBP19.95■□□□□ 0.78
VAMP4-202ENST00000367740 PANK3Q9H999 370 aa19.95■□□□□ 0.78
VAMP4-202ENST00000367740 RNF216Q9NWF9 866 aaPredicted RBP19.95■□□□□ 0.78
VAMP4-202ENST00000367740 TPTE2Q6XPS3 522 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms