RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 RGS12O14924 1447 aa12.13□□□□□ -0.47
VTA1-201ENST00000367621 SIPA1L3O60292 1781 aaPredicted RBP12.13□□□□□ -0.47
VTA1-201ENST00000367621 RIOK3O14730 519 aaKnown RBP12.13□□□□□ -0.47
VTA1-201ENST00000367621 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
VTA1-201ENST00000367621 CANXP27824 592 aaKnown RBP12.13□□□□□ -0.47
VTA1-201ENST00000367621 FAM98CQ17RN3 349 aaKnown RBP12.13□□□□□ -0.47
VTA1-201ENST00000367621 CCDC9Q9Y3X0 531 aaKnown RBP12.13□□□□□ -0.47
VTA1-201ENST00000367621 SCN11AQ9UI33 1791 aa12.13□□□□□ -0.47
VTA1-201ENST00000367621 ABCC4O15439 1325 aa12.12□□□□□ -0.47
VTA1-201ENST00000367621 ATRNO75882 1429 aa12.12□□□□□ -0.47
VTA1-201ENST00000367621 DDB1Q16531 1140 aa12.12□□□□□ -0.47
VTA1-201ENST00000367621 VARS2Q5ST30 1063 aaKnown RBP12.12□□□□□ -0.47
VTA1-201ENST00000367621 MEX3CQ5U5Q3 659 aaKnown RBP12.12□□□□□ -0.47
VTA1-201ENST00000367621 CCDC30Q5VVM6 783 aa12.12□□□□□ -0.47
VTA1-201ENST00000367621 B4GALNT3Q6L9W6 998 aa12.12□□□□□ -0.47
VTA1-201ENST00000367621 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
VTA1-201ENST00000367621 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
VTA1-201ENST00000367621 PIGBQ92521 554 aa12.12□□□□□ -0.47
VTA1-201ENST00000367621 ONECUT3O60422 494 aaPredicted RBP12.11□□□□□ -0.47
VTA1-201ENST00000367621 MVPQ14764 893 aaKnown RBP12.11□□□□□ -0.47
VTA1-201ENST00000367621 HDGFL1Q5TGJ6 251 aa12.11□□□□□ -0.47
VTA1-201ENST00000367621 ZNF687Q8N1G0 1237 aa12.11□□□□□ -0.47
VTA1-201ENST00000367621 NECTIN2Q92692 538 aa12.11□□□□□ -0.47
VTA1-201ENST00000367621 MS4A4AQ96JQ5 239 aa12.11□□□□□ -0.47
VTA1-201ENST00000367621 GLI3P10071 1580 aa12.1□□□□□ -0.47
VTA1-201ENST00000367621 MS4A1P11836 297 aa12.1□□□□□ -0.47
VTA1-201ENST00000367621 EIF2S2P20042 333 aaKnown RBP12.1□□□□□ -0.47
VTA1-201ENST00000367621 PDIA6Q15084 440 aa12.1□□□□□ -0.47
VTA1-201ENST00000367621 BBXQ8WY36 941 aaPredicted RBP12.1□□□□□ -0.47
VTA1-201ENST00000367621 GJD4Q96KN9 370 aaPredicted RBP12.1□□□□□ -0.47
VTA1-201ENST00000367621 API5Q9BZZ5 524 aaKnown RBP12.1□□□□□ -0.47
VTA1-201ENST00000367621 PTPRCP08575 1304 aa12.1□□□□□ -0.47
VTA1-201ENST00000367621 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 PROSER3Q2NL68 480 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
VTA1-201ENST00000367621 FMNL2Q96PY5 1086 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 TMOD3Q9NYL9 352 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 ASAP1Q9ULH1 1129 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 USP16Q9Y5T5 823 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 KCPQ6ZWJ8 1503 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 BCL9O00512 1426 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
VTA1-201ENST00000367621 SNRPA1P09661 255 aaKnown RBP12.08□□□□□ -0.48
VTA1-201ENST00000367621 PRIM1P49642 420 aaKnown RBP12.08□□□□□ -0.48
VTA1-201ENST00000367621 FLIIQ13045 1269 aa12.08□□□□□ -0.48
VTA1-201ENST00000367621 INTS3Q68E01 1043 aaKnown RBP12.08□□□□□ -0.48
VTA1-201ENST00000367621 LRP10Q7Z4F1 713 aa12.08□□□□□ -0.48
VTA1-201ENST00000367621 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.48
VTA1-201ENST00000367621 TTC5Q8N0Z6 440 aa12.08□□□□□ -0.48
VTA1-201ENST00000367621 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
VTA1-201ENST00000367621 STK31Q9BXU1 1019 aa12.08□□□□□ -0.48
VTA1-201ENST00000367621 PHAXQ9H814 394 aaKnown RBP12.08□□□□□ -0.48
VTA1-201ENST00000367621 TRPC5Q9UL62 973 aaPredicted RBP12.08□□□□□ -0.48
VTA1-201ENST00000367621 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.08□□□□□ -0.48
VTA1-201ENST00000367621 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.07□□□□□ -0.48
VTA1-201ENST00000367621 ZBTB7BO15156 539 aaPredicted RBP12.07□□□□□ -0.48
VTA1-201ENST00000367621 ANXA1P04083 346 aa12.07□□□□□ -0.48
VTA1-201ENST00000367621 RNF166Q96A37 237 aaPredicted RBP12.07□□□□□ -0.48
VTA1-201ENST00000367621 ZFP91Q96JP5 570 aaPredicted RBP12.07□□□□□ -0.48
VTA1-201ENST00000367621 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
VTA1-201ENST00000367621 QTRT2Q9H974 415 aaKnown RBP12.07□□□□□ -0.48
VTA1-201ENST00000367621 ZBTB40Q9NUA8 1239 aa12.07□□□□□ -0.48
VTA1-201ENST00000367621 THSD7AQ9UPZ6 1657 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 F6X3S4 739 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 AAMPQ13685 434 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 CCDC136Q96JN2 1154 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 CHMP4AQ9BY43 222 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 DBF4Q9UBU7 674 aaPredicted RBP12.06□□□□□ -0.48
VTA1-201ENST00000367621 PCDHB15Q9Y5E8 787 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 PAPPAQ13219 1627 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 KDM2BQ8NHM5 1336 aa12.06□□□□□ -0.48
VTA1-201ENST00000367621 PTCD1O75127 700 aaKnown RBP12.05□□□□□ -0.48
VTA1-201ENST00000367621 FBXO41Q8TF61 875 aa12.05□□□□□ -0.48
VTA1-201ENST00000367621 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
VTA1-201ENST00000367621 DDX19BQ9UMR2 479 aa12.05□□□□□ -0.48
VTA1-201ENST00000367621 NBPF26B4DH59 902 aa12.04□□□□□ -0.48
VTA1-201ENST00000367621 KCNQ2O43526 872 aa12.04□□□□□ -0.48
VTA1-201ENST00000367621 NBPF14Q5TI25 921 aa12.04□□□□□ -0.48
VTA1-201ENST00000367621 NBPF10Q6P3W6 841 aaKnown RBP12.04□□□□□ -0.48
VTA1-201ENST00000367621 SEPT12Q8IYM1 358 aa12.04□□□□□ -0.48
VTA1-201ENST00000367621 NBPF15Q8N660 670 aa12.04□□□□□ -0.48
VTA1-201ENST00000367621 ACSBG1Q96GR2 724 aa12.04□□□□□ -0.48
VTA1-201ENST00000367621 VIRMAQ69YN4 1812 aaKnown RBP12.03□□□□□ -0.48
VTA1-201ENST00000367621 IGHDP01880 384 aa12.03□□□□□ -0.48
VTA1-201ENST00000367621 FKBP5Q13451 457 aaPredicted RBP12.03□□□□□ -0.48
VTA1-201ENST00000367621 PTF1AQ7RTS3 328 aa12.03□□□□□ -0.48
VTA1-201ENST00000367621 HYPKQ9NX55 129 aa12.03□□□□□ -0.48
VTA1-201ENST00000367621 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
VTA1-201ENST00000367621 ADCY9O60503 1353 aa12.03□□□□□ -0.48
VTA1-201ENST00000367621 PTGER2P43116 358 aa12.02□□□□□ -0.49
VTA1-201ENST00000367621 DNAJC10Q8IXB1 793 aa12.02□□□□□ -0.49
VTA1-201ENST00000367621 SYTL4Q96C24 671 aaPredicted RBP12.02□□□□□ -0.49
VTA1-201ENST00000367621 UBR2Q8IWV8 1755 aa12.02□□□□□ -0.49
VTA1-201ENST00000367621 C5P01031 1676 aa12.01□□□□□ -0.49
VTA1-201ENST00000367621 PI4KAP2A4QPH2 592 aa12.01□□□□□ -0.49
VTA1-201ENST00000367621 A1BGP04217 495 aa12.01□□□□□ -0.49
VTA1-201ENST00000367621 PIP4K2AP48426 406 aaPredicted RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms