RNA–Protein interactions for RNA: ENST00000367538.1

SMG7-203, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG7, Length 328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-203ENST00000367538 RSPH6AQ9H0K4 717 aa24.84■■□□□ 1.57
SMG7-203ENST00000367538 NUDCQ9Y266 331 aa24.84■■□□□ 1.57
SMG7-203ENST00000367538 SRGNP10124 158 aa24.83■■□□□ 1.57
SMG7-203ENST00000367538 ARFGEF2Q9Y6D5 1785 aa24.82■■□□□ 1.56
SMG7-203ENST00000367538 PHACTR3Q96KR7 559 aa24.82■■□□□ 1.56
SMG7-203ENST00000367538 ZNF652Q9Y2D9 606 aa24.82■■□□□ 1.56
SMG7-203ENST00000367538 COL13A1Q5TAT6 717 aaPredicted RBP24.81■■□□□ 1.56
SMG7-203ENST00000367538 PRPF40BQ6NWY9 871 aaKnown RBP24.81■■□□□ 1.56
SMG7-203ENST00000367538 SNRPA1P09661 255 aaKnown RBP24.8■■□□□ 1.56
SMG7-203ENST00000367538 CCDC24Q8N4L8 307 aa24.8■■□□□ 1.56
SMG7-203ENST00000367538 RTF1Q92541 710 aaKnown RBP24.8■■□□□ 1.56
SMG7-203ENST00000367538 ZNF219Q9P2Y4 722 aaPredicted RBP24.8■■□□□ 1.56
SMG7-203ENST00000367538 KCNQ3O43525 872 aa24.79■■□□□ 1.56
SMG7-203ENST00000367538 USP16Q9Y5T5 823 aa24.79■■□□□ 1.56
SMG7-203ENST00000367538 SLX4Q8IY92 1834 aa24.79■■□□□ 1.56
SMG7-203ENST00000367538 NBPF5PQ86XG9 351 aaPredicted RBP24.78■■□□□ 1.56
SMG7-203ENST00000367538 HTATSF1O43719 755 aaKnown RBP24.77■■□□□ 1.56
SMG7-203ENST00000367538 CNGB1Q14028 1251 aaPredicted RBP24.77■■□□□ 1.56
SMG7-203ENST00000367538 IQCA1LA6NCM1 817 aa24.76■■□□□ 1.55
SMG7-203ENST00000367538 CHADLQ6NUI6 762 aa24.76■■□□□ 1.55
SMG7-203ENST00000367538 KLRG2A4D1S0 409 aaPredicted RBP24.75■■□□□ 1.55
SMG7-203ENST00000367538 NPR1P16066 1061 aa24.75■■□□□ 1.55
SMG7-203ENST00000367538 CCDC93Q567U6 631 aa24.75■■□□□ 1.55
SMG7-203ENST00000367538 TNS4Q8IZW8 715 aa24.75■■□□□ 1.55
SMG7-203ENST00000367538 CREBZFQ9NS37 354 aa24.75■■□□□ 1.55
SMG7-203ENST00000367538 HSPA1AP0DMV8 641 aaKnown RBP24.74■■□□□ 1.55
SMG7-203ENST00000367538 HSPA1BP0DMV9 641 aaKnown RBP24.74■■□□□ 1.55
SMG7-203ENST00000367538 U2AF1L5P0DN76 240 aaPredicted RBP24.74■■□□□ 1.55
SMG7-203ENST00000367538 U2AF1Q01081 240 aaKnown RBP eCLIP24.74■■□□□ 1.552e-8■■□□□ 12.3
SMG7-203ENST00000367538 TPTE2Q6XPS3 522 aa24.74■■□□□ 1.55
SMG7-203ENST00000367538 C7orf43Q8WVR3 580 aa24.74■■□□□ 1.55
SMG7-203ENST00000367538 L3MBTL3Q96JM7 780 aaPredicted RBP24.74■■□□□ 1.55
SMG7-203ENST00000367538 CACNA1SQ13698 1873 aa24.74■■□□□ 1.55
SMG7-203ENST00000367538 DDNO94850 711 aaPredicted RBP24.73■■□□□ 1.55
SMG7-203ENST00000367538 MCM10Q7L590 875 aa24.72■■□□□ 1.55
SMG7-203ENST00000367538 SCN4AP35499 1836 aa24.71■■□□□ 1.55
SMG7-203ENST00000367538 PRAMEF22A3QJZ6 481 aa24.71■■□□□ 1.55
SMG7-203ENST00000367538 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
SMG7-203ENST00000367538 NIP7Q9Y221 180 aaKnown RBP eCLIP24.71■■□□□ 1.55
SMG7-203ENST00000367538 FKBP4Q02790 459 aaKnown RBP eCLIP24.7■■□□□ 1.54
SMG7-203ENST00000367538 LDHDQ86WU2 507 aa24.7■■□□□ 1.54
SMG7-203ENST00000367538 RTKN2Q8IZC4 609 aa24.7■■□□□ 1.54
SMG7-203ENST00000367538 PPP2R1AP30153 589 aa24.69■■□□□ 1.54
SMG7-203ENST00000367538 NBPF26B4DH59 902 aa24.68■■□□□ 1.54
SMG7-203ENST00000367538 NBPF10Q6P3W6 841 aaKnown RBP24.68■■□□□ 1.54
SMG7-203ENST00000367538 NBPF15Q8N660 670 aa24.68■■□□□ 1.54
SMG7-203ENST00000367538 ALDH1B1P30837 517 aa24.67■■□□□ 1.54
SMG7-203ENST00000367538 TAF7Q15545 349 aaPredicted RBP24.67■■□□□ 1.54
SMG7-203ENST00000367538 TAF1DQ9H5J8 278 aaPredicted RBP24.67■■□□□ 1.54
SMG7-203ENST00000367538 PASKQ96RG2 1323 aa24.65■■□□□ 1.54
SMG7-203ENST00000367538 LAMB4A4D0S4 1761 aa24.65■■□□□ 1.54
SMG7-203ENST00000367538 POTEIP0CG38 1075 aa24.65■■□□□ 1.54
SMG7-203ENST00000367538 POTEJP0CG39 1038 aa24.65■■□□□ 1.54
SMG7-203ENST00000367538 PNISRQ8TF01 805 aaKnown RBP24.65■■□□□ 1.54
SMG7-203ENST00000367538 DCTN1Q14203 1278 aa24.64■■□□□ 1.54
SMG7-203ENST00000367538 NYXQ9GZU5 481 aa24.64■■□□□ 1.54
SMG7-203ENST00000367538 CNTNAP1P78357 1384 aa24.64■■□□□ 1.53
SMG7-203ENST00000367538 NEFMP07197 916 aa24.63■■□□□ 1.53
SMG7-203ENST00000367538 GTF2E1P29083 439 aaPredicted RBP24.63■■□□□ 1.53
SMG7-203ENST00000367538 ZNF277Q9NRM2 450 aaPredicted RBP24.63■■□□□ 1.53
SMG7-203ENST00000367538 ERVV-1B6SEH8 477 aa24.62■■□□□ 1.53
SMG7-203ENST00000367538 MKRN1Q9UHC7 482 aaKnown RBP24.62■■□□□ 1.53
SMG7-203ENST00000367538 HACL1Q9UJ83 578 aa24.62■■□□□ 1.53
SMG7-203ENST00000367538 CRY2Q49AN0 593 aa24.61■■□□□ 1.53
SMG7-203ENST00000367538 CC2D2BQ6DHV5 1058 aa24.61■■□□□ 1.53
SMG7-203ENST00000367538 PNMA8AQ86V59 439 aaPredicted RBP24.61■■□□□ 1.53
SMG7-203ENST00000367538 PSMD1Q99460 953 aa24.61■■□□□ 1.53
SMG7-203ENST00000367538 RIC1Q4ADV7 1423 aa24.61■■□□□ 1.53
SMG7-203ENST00000367538 ZNF541Q9H0D2 1346 aa24.61■■□□□ 1.53
SMG7-203ENST00000367538 IBTKQ9P2D0 1353 aaPredicted RBP24.6■■□□□ 1.53
SMG7-203ENST00000367538 FZD9O00144 591 aa24.6■■□□□ 1.53
SMG7-203ENST00000367538 IARSP41252 1262 aaKnown RBP24.6■■□□□ 1.53
SMG7-203ENST00000367538 HLFQ16534 295 aa24.6■■□□□ 1.53
SMG7-203ENST00000367538 GRIPAP1Q4V328 841 aa24.6■■□□□ 1.53
SMG7-203ENST00000367538 FAM177BA6PVY3 158 aa24.59■■□□□ 1.53
SMG7-203ENST00000367538 CAPN15O75808 1086 aa24.59■■□□□ 1.53
SMG7-203ENST00000367538 KDM3BQ7LBC6 1761 aa24.58■■□□□ 1.53
SMG7-203ENST00000367538 ADAMTSL1Q8N6G6 1762 aa24.58■■□□□ 1.53
SMG7-203ENST00000367538 TMEM88BA6NKF7 163 aa24.58■■□□□ 1.53
SMG7-203ENST00000367538 GPC2Q8N158 579 aa24.58■■□□□ 1.53
SMG7-203ENST00000367538 SYNE4Q8N205 404 aa24.58■■□□□ 1.53
SMG7-203ENST00000367538 SNED1Q8TER0 1413 aa24.58■■□□□ 1.53
SMG7-203ENST00000367538 MAP3K15Q6ZN16 1313 aa24.58■■□□□ 1.52
SMG7-203ENST00000367538 ITGBL1O95965 494 aaPredicted RBP24.57■■□□□ 1.52
SMG7-203ENST00000367538 EPHX2P34913 555 aa24.57■■□□□ 1.52
SMG7-203ENST00000367538 EAPPQ56P03 285 aaPredicted RBP24.57■■□□□ 1.52
SMG7-203ENST00000367538 KIF6Q6ZMV9 814 aa24.57■■□□□ 1.52
SMG7-203ENST00000367538 JDP2Q8WYK2 163 aa24.57■■□□□ 1.52
SMG7-203ENST00000367538 OLFM4Q6UX06 510 aa24.56■■□□□ 1.52
SMG7-203ENST00000367538 ABCC12Q96J65 1359 aa24.55■■□□□ 1.52
SMG7-203ENST00000367538 HOXA10P31260 410 aaPredicted RBP24.55■■□□□ 1.52
SMG7-203ENST00000367538 MIS18AQ9NYP9 233 aa24.55■■□□□ 1.52
SMG7-203ENST00000367538 ERBB4Q15303 1308 aa24.55■■□□□ 1.52
SMG7-203ENST00000367538 NUP98P52948 1817 aa24.54■■□□□ 1.52
SMG7-203ENST00000367538 EIF4A1P60842 406 aaKnown RBP24.54■■□□□ 1.52
SMG7-203ENST00000367538 PRDM10Q9NQV6 1147 aa24.54■■□□□ 1.52
SMG7-203ENST00000367538 CLEC11AQ9Y240 323 aa24.54■■□□□ 1.52
SMG7-203ENST00000367538 DLG5Q8TDM6 1919 aa24.53■■□□□ 1.52
SMG7-203ENST00000367538 RPGRQ92834 1020 aaKnown RBP24.53■■□□□ 1.52
SMG7-203ENST00000367538 PNNQ9H307 717 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms