RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 SUDS3Q9H7L9 328 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-209ENST00000367257 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 LRPPRCP42704 1394 aaKnown RBP10.32□□□□□ -0.76
SYNE1-209ENST00000367257 BRPF1P55201 1214 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-209ENST00000367257 AMOTQ4VCS5 1084 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 HS1BP3Q53T59 392 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 ALS2CR12Q96Q35 445 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 FOSBP53539 338 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 AACSQ86V21 672 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 LUZP1Q86V48 1076 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 ABTB2Q8N961 1025 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 CCDC12Q8WUD4 166 aaPredicted RBP10.32□□□□□ -0.76
SYNE1-209ENST00000367257 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.32□□□□□ -0.76
SYNE1-209ENST00000367257 PTPRKQ15262 1439 aa10.32□□□□□ -0.76
SYNE1-209ENST00000367257 MX1P20591 662 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 CFAP100Q494V2 611 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 MPNDQ8N594 471 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 LMAN1P49257 510 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 AMPD3Q01432 767 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 STX1AQ16623 288 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 CCDC178Q5BJE1 867 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 LARP1Q6PKG0 1096 aaKnown RBP10.31□□□□□ -0.76
SYNE1-209ENST00000367257 UNC13BO14795 1591 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 IGSF3O75054 1194 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 TOP1P11387 765 aaKnown RBP10.31□□□□□ -0.76
SYNE1-209ENST00000367257 CABP4P57796 275 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 TRAF1Q13077 416 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 TEX2Q8IWB9 1127 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 ANKRD18BA2A2Z9 1011 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 CFAP70Q5T0N1 1121 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 STXBP4Q6ZWJ1 553 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 SLF2Q8IX21 1173 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 CDCA7LQ96GN5 454 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 MPHOSPH8Q99549 860 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 LIMCH1Q9UPQ0 1083 aa10.31□□□□□ -0.76
SYNE1-209ENST00000367257 RNF17Q9BXT8 1623 aaKnown RBP10.31□□□□□ -0.76
SYNE1-209ENST00000367257 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 CKAP4Q07065 602 aaKnown RBP10.3□□□□□ -0.76
SYNE1-209ENST00000367257 TMEM266Q2M3C6 531 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 SPECC1LQ69YQ0 1117 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 ZSCAN16Q9H4T2 348 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-209ENST00000367257 SRGAP3O43295 1099 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 GBP6Q6ZN66 633 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 KDM5DQ9BY66 1539 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-209ENST00000367257 BMP2KLQ5H9B9 411 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 ZNF530Q6P9A1 599 aaPredicted RBP10.3□□□□□ -0.76
SYNE1-209ENST00000367257 PPM1EQ8WY54 764 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 CETN1Q12798 172 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 DRC1Q96MC2 740 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 CDK19Q9BWU1 502 aa10.3□□□□□ -0.76
SYNE1-209ENST00000367257 SYTL4Q96C24 671 aaPredicted RBP10.29□□□□□ -0.76
SYNE1-209ENST00000367257 RALGAPBQ86X10 1494 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.29□□□□□ -0.76
SYNE1-209ENST00000367257 IGHMBP2P38935 993 aaKnown RBP10.29□□□□□ -0.76
SYNE1-209ENST00000367257 ANAPC15P60006 121 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 SPAG1Q07617 926 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 KLHL40Q2TBA0 621 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 ARHGAP45Q92619 1136 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 A0A087WZG4 1122 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 GNAT3A8MTJ3 354 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 TMPOP42166 694 aaKnown RBP10.29□□□□□ -0.76
SYNE1-209ENST00000367257 SULT6B1Q6IMI4 303 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 PRAM1Q96QH2 718 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 ZNF652Q9Y2D9 606 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 TTC21BQ7Z4L5 1316 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 CFAP74Q9C0B2 1584 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 TTC21AQ8NDW8 1320 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 FYB1O15117 783 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 RMND1Q9NWS8 449 aa10.29□□□□□ -0.76
SYNE1-209ENST00000367257 LRRFIP2Q9Y608 721 aaKnown RBP10.29□□□□□ -0.76
SYNE1-209ENST00000367257 SHANK2Q9UPX8 1470 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 TTF1Q15361 905 aaPredicted RBP10.28□□□□□ -0.76
SYNE1-209ENST00000367257 CERS3Q8IU89 383 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 FMNL3Q8IVF7 1028 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 CTAGE1Q96RT6 745 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 SEC63Q9UGP8 760 aaKnown RBP10.28□□□□□ -0.76
SYNE1-209ENST00000367257 EIF2AK4Q9P2K8 1649 aaKnown RBP10.28□□□□□ -0.76
SYNE1-209ENST00000367257 WDR7Q9Y4E6 1490 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 PLVAPQ9BX97 442 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 PANK2Q9BZ23 570 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 BCAR3O75815 825 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 PRPHP41219 470 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 AIDAQ96BJ3 306 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 FAM135AQ9P2D6 1515 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 A0A1B0GUA9 196 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 ATP2B1P20020 1258 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 PPP4R3AQ6IN85 833 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 SPATA24Q86W54 205 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 EVI5LQ96CN4 794 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 STMN4Q9H169 189 aaPredicted RBP10.28□□□□□ -0.76
SYNE1-209ENST00000367257 NCOA1Q15788 1441 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 NSD3Q9BZ95 1437 aa10.28□□□□□ -0.76
SYNE1-209ENST00000367257 MAP2K2P36507 400 aa10.27□□□□□ -0.76
SYNE1-209ENST00000367257 CLIP2Q9UDT6 1046 aa10.27□□□□□ -0.76
SYNE1-209ENST00000367257 ZBTB12Q9Y330 459 aaPredicted RBP10.27□□□□□ -0.76
SYNE1-209ENST00000367257 CASTP20810 708 aaKnown RBP10.27□□□□□ -0.77
SYNE1-209ENST00000367257 UBE2HP62256 183 aa10.27□□□□□ -0.77
SYNE1-209ENST00000367257 C6orf163Q5TEZ5 329 aa10.27□□□□□ -0.77
SYNE1-209ENST00000367257 ZKSCAN5Q9Y2L8 839 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms