RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 SPATA31E1Q6ZUB1 1445 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 A0A1W2PP64 1363 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 MINDY4BA8MYZ0 360 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 CT47A1Q5JQC4 288 aaPredicted RBP13.38□□□□□ -0.27
RD3-201ENST00000367002 USP26Q9BXU7 913 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
RD3-201ENST00000367002 A2MP01023 1474 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 POGZQ7Z3K3 1410 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 PATL2C9JE40 543 aaKnown RBP13.38□□□□□ -0.27
RD3-201ENST00000367002 URI1O94763 535 aaPredicted RBP13.38□□□□□ -0.27
RD3-201ENST00000367002 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
RD3-201ENST00000367002 LEKR1Q6ZMV7 388 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 DDX46Q7L014 1031 aaKnown RBP13.38□□□□□ -0.27
RD3-201ENST00000367002 DEF6Q9H4E7 631 aa13.38□□□□□ -0.27
RD3-201ENST00000367002 EPB41L2O43491 1005 aaKnown RBP13.37□□□□□ -0.27
RD3-201ENST00000367002 ERLIN1O75477 346 aa13.37□□□□□ -0.27
RD3-201ENST00000367002 HAND2P61296 217 aa13.37□□□□□ -0.27
RD3-201ENST00000367002 PRDM10Q9NQV6 1147 aa13.37□□□□□ -0.27
RD3-201ENST00000367002 USP16Q9Y5T5 823 aa13.37□□□□□ -0.27
RD3-201ENST00000367002 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
RD3-201ENST00000367002 KRT18P05783 430 aaKnown RBP13.37□□□□□ -0.27
RD3-201ENST00000367002 ATP2B2Q01814 1243 aa13.37□□□□□ -0.27
RD3-201ENST00000367002 HMG20BQ9P0W2 317 aa13.37□□□□□ -0.27
RD3-201ENST00000367002 ORC3Q9UBD5 711 aaPredicted RBP13.37□□□□□ -0.27
RD3-201ENST00000367002 ZKSCAN5Q9Y2L8 839 aa13.37□□□□□ -0.27
RD3-201ENST00000367002 ANKRD13DQ6ZTN6 518 aa13.37□□□□□ -0.27
RD3-201ENST00000367002 TOP1P11387 765 aaKnown RBP13.36□□□□□ -0.27
RD3-201ENST00000367002 IGHMBP2P38935 993 aaKnown RBP13.36□□□□□ -0.27
RD3-201ENST00000367002 DNM1Q05193 864 aaKnown RBP13.36□□□□□ -0.27
RD3-201ENST00000367002 OTUD7AQ8TE49 926 aaPredicted RBP13.36□□□□□ -0.27
RD3-201ENST00000367002 LRRC2Q9BYS8 371 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 TTC12Q9H892 705 aaPredicted RBP13.36□□□□□ -0.27
RD3-201ENST00000367002 TRIM35Q9UPQ4 493 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 H0YHG0 523 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 CCDC196A0A1B0GTZ2 297 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 TMCO3Q6UWJ1 677 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 ZHX3Q9H4I2 956 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 ITSN2Q9NZM3 1697 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 SOGA3Q5TF21 947 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 DACT1Q9NYF0 836 aa13.36□□□□□ -0.27
RD3-201ENST00000367002 CAVIN2O95810 425 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 PA2G4Q9UQ80 394 aaKnown RBP13.35□□□□□ -0.27
RD3-201ENST00000367002 NCKAP5LQ9HCH0 1330 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 NEMFO60524 1076 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 RAB11FIP4Q86YS3 637 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 CEP131Q9UPN4 1083 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 PPIP5K1Q6PFW1 1433 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 GRM8O00222 908 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 DYNC1I1O14576 645 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 ZSCAN12O43309 604 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 CHMLP26374 656 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 NOLC1Q14978 699 aaKnown RBP eCLIP13.35□□□□□ -0.27
RD3-201ENST00000367002 CNNM3Q8NE01 707 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 TANGO6Q9C0B7 1094 aa13.35□□□□□ -0.27
RD3-201ENST00000367002 SHANK2Q9UPX8 1470 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
RD3-201ENST00000367002 F13A1P00488 732 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 MAP3K12Q12852 859 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 STX1AQ16623 288 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 LDHAL6AQ6ZMR3 332 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 COPS6Q7L5N1 327 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 TMOD3Q9NYL9 352 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 EIF3JO75822 258 aaKnown RBP13.34□□□□□ -0.27
RD3-201ENST00000367002 SSBP05455 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
RD3-201ENST00000367002 EIF5P55010 431 aaKnown RBP13.34□□□□□ -0.27
RD3-201ENST00000367002 FAM200AQ8TCP9 573 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 ZSCAN16Q9H4T2 348 aaPredicted RBP13.34□□□□□ -0.27
RD3-201ENST00000367002 SLC12A7Q9Y666 1083 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 GPTP24298 496 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 ISM2Q6H9L7 571 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 CCDC186Q7Z3E2 898 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 PRIMPOLQ96LW4 560 aa13.34□□□□□ -0.27
RD3-201ENST00000367002 TRMT112Q9UI30 125 aaKnown RBP13.34□□□□□ -0.27
RD3-201ENST00000367002 ERICH4A6NGS2 130 aa13.33□□□□□ -0.27
RD3-201ENST00000367002 PRKCSHP14314 528 aaPredicted RBP13.33□□□□□ -0.27
RD3-201ENST00000367002 CCDC181Q5TID7 509 aa13.33□□□□□ -0.27
RD3-201ENST00000367002 TTC21AQ8NDW8 1320 aa13.33□□□□□ -0.27
RD3-201ENST00000367002 ALDH1L1O75891 902 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 AK2P54819 239 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 KSR2Q6VAB6 950 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 G2E3Q7L622 706 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 MICU3Q86XE3 530 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 ANKRD24Q8TF21 1146 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 XAGE3Q8WTP9 111 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 INTS4Q96HW7 963 aaKnown RBP13.33□□□□□ -0.28
RD3-201ENST00000367002 LUC7LQ9NQ29 371 aaKnown RBP13.33□□□□□ -0.28
RD3-201ENST00000367002 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.28
RD3-201ENST00000367002 GSDMDP57764 484 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 SLC39A6Q13433 755 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 TMC6Q7Z403 805 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 EYA1Q99502 592 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 IARSP41252 1262 aaKnown RBP13.33□□□□□ -0.28
RD3-201ENST00000367002 BICDL1Q6ZP65 573 aa13.33□□□□□ -0.28
RD3-201ENST00000367002 CTTNBP2Q8WZ74 1663 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 GOLGA8AA7E2F4 631 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 ZFYVE27Q5T4F4 411 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 KIAA0556O60303 1618 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 KRT28Q7Z3Y7 464 aa13.32□□□□□ -0.28
RD3-201ENST00000367002 LINS1Q8NG48 757 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms