RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 SOX11P35716 441 aa12.38□□□□□ -0.43
H3F3A-201ENST00000366813 HRH3Q9Y5N1 445 aa12.38□□□□□ -0.43
H3F3A-201ENST00000366813 A0A1B0GTH6 734 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 TOM1O60784 492 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 CELA2BP08218 269 aaPredicted RBP12.37□□□□□ -0.43
H3F3A-201ENST00000366813 WWC1Q8IX03 1113 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 TMEM151AQ8N4L1 468 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 POM121Q96HA1 1249 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 NSFL1CQ9UNZ2 370 aaKnown RBP12.37□□□□□ -0.43
H3F3A-201ENST00000366813 CSB-PGBD3P0DP91 1061 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 PGBD3Q8N328 593 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 FHDC1Q9C0D6 1143 aaPredicted RBP12.37□□□□□ -0.43
H3F3A-201ENST00000366813 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 COG6Q9Y2V7 657 aa12.37□□□□□ -0.43
H3F3A-201ENST00000366813 C9orf84Q5VXU9 1444 aa12.36□□□□□ -0.43
H3F3A-201ENST00000366813 GDF11O95390 407 aa12.36□□□□□ -0.43
H3F3A-201ENST00000366813 STAU1O95793 577 aaKnown RBP12.36□□□□□ -0.43
H3F3A-201ENST00000366813 MX2P20592 715 aa12.36□□□□□ -0.43
H3F3A-201ENST00000366813 RASSF7Q02833 373 aa12.36□□□□□ -0.43
H3F3A-201ENST00000366813 TLR1Q15399 786 aa12.36□□□□□ -0.43
H3F3A-201ENST00000366813 FAM9AQ8IZU1 332 aaPredicted RBP12.36□□□□□ -0.43
H3F3A-201ENST00000366813 PLPP7Q8NBV4 271 aa12.36□□□□□ -0.43
H3F3A-201ENST00000366813 CHIC2Q9UKJ5 165 aa12.36□□□□□ -0.43
H3F3A-201ENST00000366813 TRAPPC8Q9Y2L5 1435 aa12.36□□□□□ -0.43
H3F3A-201ENST00000366813 CAMSAP1Q5T5Y3 1602 aa12.35□□□□□ -0.43
H3F3A-201ENST00000366813 RAD21O60216 631 aa12.35□□□□□ -0.43
H3F3A-201ENST00000366813 C4orf17Q53FE4 359 aa12.35□□□□□ -0.43
H3F3A-201ENST00000366813 SCARF2Q96GP6 870 aaPredicted RBP12.35□□□□□ -0.43
H3F3A-201ENST00000366813 SCAPERQ9BY12 1400 aa12.34□□□□□ -0.43
H3F3A-201ENST00000366813 RHBDD1Q8TEB9 315 aa12.34□□□□□ -0.43
H3F3A-201ENST00000366813 GDF10P55107 478 aa12.33□□□□□ -0.44
H3F3A-201ENST00000366813 PHF24Q9UPV7 400 aa12.33□□□□□ -0.44
H3F3A-201ENST00000366813 C3P01024 1663 aa12.32□□□□□ -0.44
H3F3A-201ENST00000366813 MSX1P28360 303 aa12.32□□□□□ -0.44
H3F3A-201ENST00000366813 IRS1P35568 1242 aa12.32□□□□□ -0.44
H3F3A-201ENST00000366813 PPARGC1BQ86YN6 1023 aaKnown RBP12.32□□□□□ -0.44
H3F3A-201ENST00000366813 KCTD17Q8N5Z5 321 aa12.32□□□□□ -0.44
H3F3A-201ENST00000366813 PLEKHD1A6NEE1 506 aa12.31□□□□□ -0.44
H3F3A-201ENST00000366813 INHAP05111 366 aa12.31□□□□□ -0.44
H3F3A-201ENST00000366813 EFHC2Q5JST6 749 aa12.31□□□□□ -0.44
H3F3A-201ENST00000366813 POTEAQ6S8J7 498 aa12.31□□□□□ -0.44
H3F3A-201ENST00000366813 NEDD1Q8NHV4 660 aa12.31□□□□□ -0.44
H3F3A-201ENST00000366813 CFHR5Q9BXR6 569 aa12.31□□□□□ -0.44
H3F3A-201ENST00000366813 RUBCNLQ9H714 662 aa12.31□□□□□ -0.44
H3F3A-201ENST00000366813 BCRP11274 1271 aa12.3□□□□□ -0.44
H3F3A-201ENST00000366813 GSK3AP49840 483 aa12.3□□□□□ -0.44
H3F3A-201ENST00000366813 PROSER2Q86WR7 435 aaPredicted RBP12.3□□□□□ -0.44
H3F3A-201ENST00000366813 FNBP4Q8N3X1 1017 aaPredicted RBP12.3□□□□□ -0.44
H3F3A-201ENST00000366813 CFAP74Q9C0B2 1584 aa12.29□□□□□ -0.44
H3F3A-201ENST00000366813 SCNN1DP51172 638 aa12.28□□□□□ -0.44
H3F3A-201ENST00000366813 LBRQ14739 615 aaKnown RBP12.28□□□□□ -0.44
H3F3A-201ENST00000366813 ACDQ96AP0 544 aa12.28□□□□□ -0.44
H3F3A-201ENST00000366813 AIDAQ96BJ3 306 aa12.28□□□□□ -0.44
H3F3A-201ENST00000366813 SERTAD1Q9UHV2 236 aa12.28□□□□□ -0.44
H3F3A-201ENST00000366813 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
H3F3A-201ENST00000366813 CTTNBP2Q8WZ74 1663 aa12.28□□□□□ -0.44
H3F3A-201ENST00000366813 SKIP12755 728 aa12.27□□□□□ -0.45
H3F3A-201ENST00000366813 MAP2K3P46734 347 aa12.27□□□□□ -0.45
H3F3A-201ENST00000366813 PLA2G4AP47712 749 aa12.27□□□□□ -0.45
H3F3A-201ENST00000366813 SMTNP53814 917 aa12.27□□□□□ -0.45
H3F3A-201ENST00000366813 EML3Q32P44 896 aa12.27□□□□□ -0.45
H3F3A-201ENST00000366813 SRCAPQ6ZRS2 3230 aa12.27□□□□□ -0.45
H3F3A-201ENST00000366813 TBC1D9Q6ZT07 1266 aa12.27□□□□□ -0.45
H3F3A-201ENST00000366813 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.45
H3F3A-201ENST00000366813 KANK3Q6NY19 840 aa12.26□□□□□ -0.45
H3F3A-201ENST00000366813 PIK3CDO00329 1044 aa12.25□□□□□ -0.45
H3F3A-201ENST00000366813 AFAP1Q8N556 730 aa12.25□□□□□ -0.45
H3F3A-201ENST00000366813 NUP153P49790 1475 aaKnown RBP12.24□□□□□ -0.45
H3F3A-201ENST00000366813 THBS1P07996 1170 aa12.24□□□□□ -0.45
H3F3A-201ENST00000366813 BEND7Q8N7W2 519 aaPredicted RBP12.24□□□□□ -0.45
H3F3A-201ENST00000366813 NOD1Q9Y239 953 aa12.24□□□□□ -0.45
H3F3A-201ENST00000366813 RAPGEF6Q8TEU7 1601 aa12.23□□□□□ -0.45
H3F3A-201ENST00000366813 ALKQ9UM73 1620 aa12.23□□□□□ -0.45
H3F3A-201ENST00000366813 LZTS3O60299 673 aaPredicted RBP12.23□□□□□ -0.45
H3F3A-201ENST00000366813 PODNQ7Z5L7 613 aa12.23□□□□□ -0.45
H3F3A-201ENST00000366813 OXCT2Q9BYC2 517 aaPredicted RBP12.23□□□□□ -0.45
H3F3A-201ENST00000366813 ALG2Q9H553 416 aa12.23□□□□□ -0.45
H3F3A-201ENST00000366813 TCOF1Q13428 1488 aaKnown RBP12.23□□□□□ -0.45
H3F3A-201ENST00000366813 PHF20L1A8MW92 1017 aa12.22□□□□□ -0.45
H3F3A-201ENST00000366813 PSME1Q06323 249 aa12.21□□□□□ -0.45
H3F3A-201ENST00000366813 KLRG1Q96E93 195 aa12.21□□□□□ -0.45
H3F3A-201ENST00000366813 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
H3F3A-201ENST00000366813 ATXN7L1Q9ULK2 861 aaPredicted RBP12.21□□□□□ -0.45
H3F3A-201ENST00000366813 PLA2R1Q13018 1463 aa12.21□□□□□ -0.45
H3F3A-201ENST00000366813 PTPRKQ15262 1439 aa12.21□□□□□ -0.46
H3F3A-201ENST00000366813 CNTNAP5Q8WYK1 1306 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 A6NJY4 79 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 BACH1O14867 736 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 BMP4P12644 408 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 FIGNL1Q6PIW4 674 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 C1orf216Q8TAB5 229 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 SLC4A9Q96Q91 983 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 CRISPLD1Q9H336 500 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 CABP1Q9NZU7 370 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 PCDHGA11Q9Y5H2 935 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 PLCH2O75038 1416 aa12.2□□□□□ -0.46
H3F3A-201ENST00000366813 SHANK2Q9UPX8 1470 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 TMEM229AB2RXF0 380 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 CDK2AP1O14519 115 aa12.19□□□□□ -0.46
H3F3A-201ENST00000366813 OIP5O43482 229 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms