RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 SURF6O75683 361 aaKnown RBP12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 WHAMMP3Q1A5X7 153 aa12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 USP48Q86UV5 1035 aa12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 SMARCA5O60264 1052 aaPredicted RBP12.71□□□□□ -0.37
CDC42BPA-205ENST00000366769 SYT10Q6XYQ8 523 aa12.71□□□□□ -0.38
CDC42BPA-205ENST00000366769 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.38
CDC42BPA-205ENST00000366769 MICAL1Q8TDZ2 1067 aa12.71□□□□□ -0.38
CDC42BPA-205ENST00000366769 NAP1L3Q99457 506 aaPredicted RBP12.71□□□□□ -0.38
CDC42BPA-205ENST00000366769 SMARCA2P51531 1590 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 TBC1D9Q6ZT07 1266 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 ZNF165P49910 485 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 APBB1IPQ7Z5R6 666 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 DIAPH1O60610 1272 aaKnown RBP12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 UBA5Q9GZZ9 404 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 DACH1Q9UI36 760 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 CCDC172P0C7W6 258 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 JPH2Q9BR39 696 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 ERO1AQ96HE7 468 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 FBF1Q8TES7 1133 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 N4BP2L2Q92802 583 aaPredicted RBP12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 SIL1Q9H173 461 aa12.7□□□□□ -0.38
CDC42BPA-205ENST00000366769 GOLGA6L9A6NEM1 432 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 PUF60Q9UHX1 559 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 SEC24BO95487 1268 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 TACO1Q9BSH4 297 aaKnown RBP12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 CCDC83Q8IWF9 413 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 ATF3P18847 181 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 MXRA7P84157 204 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 DIXDC1Q155Q3 683 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 B4GALNT4Q76KP1 1039 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 HNRNPMP52272 730 aaKnown RBP eCLIP12.69□□□□□ -0.385e-11■■■■■ 37.4
CDC42BPA-205ENST00000366769 EFCC1Q9HA90 598 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 SUFUQ9UMX1 484 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 SYT1P21579 422 aa12.69□□□□□ -0.38
CDC42BPA-205ENST00000366769 KARSQ15046 597 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 DAAM2Q86T65 1068 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 ARL1P40616 181 aaPredicted RBP12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 TBC1D31Q96DN5 1066 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 CA8P35219 290 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 TYRO3Q06418 890 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 PPP1R12CQ9BZL4 782 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 HSP90AA4PQ58FG1 418 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 STRN4Q9NRL3 753 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 MRPS9P82933 396 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 SF3B2Q13435 895 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 ANO10Q9NW15 660 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 CTAGE9A4FU28 777 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 EVCP57679 992 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 FSIP1Q8NA03 581 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 LARP1Q6PKG0 1096 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 DNAI2Q9GZS0 605 aa12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 MKRN1Q9UHC7 482 aaKnown RBP12.68□□□□□ -0.38
CDC42BPA-205ENST00000366769 CCDC144AA2RUR9 1427 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 EFCAB2Q5VUJ9 269 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 RPUSD2Q8IZ73 545 aaKnown RBP12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 CTNNA2P26232 953 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 FAM212AQ96EL1 285 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 UBE2HP62256 183 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 MORC4Q8TE76 937 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 ZNF365Q70YC5 407 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 FAM200AQ8TCP9 573 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 PABPN1LA6NDY0 278 aaKnown RBP12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 GOLGA5Q8TBA6 731 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 SF3A3Q12874 501 aaKnown RBP eCLIP12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 SPA17Q15506 151 aa12.67□□□□□ -0.38
CDC42BPA-205ENST00000366769 FAM114A1Q8IWE2 563 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 VGFO15240 615 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.66□□□□□ -0.381e-6■■■□□ 17.5
CDC42BPA-205ENST00000366769 IGHDP01880 384 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 NSRP1Q9H0G5 558 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 GBP5Q96PP8 586 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 DNAJC25Q9H1X3 360 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 VEZTQ9HBM0 779 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 ANKRD18BA2A2Z9 1011 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 PPP2R1AP30153 589 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 CCDC96Q2M329 555 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 SELENOSQ9BQE4 189 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 LRPPRCP42704 1394 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 FERP16591 822 aa12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 LACTBP83111 547 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-205ENST00000366769 SMIM23A6NLE4 172 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 CTAGE15A4D2H0 777 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 CTAGE8P0CG41 777 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 CTAGE6Q86UF2 777 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 CTAGE4Q8IX94 777 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 CUX2O14529 1486 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 FKBP4Q02790 459 aaKnown RBP eCLIP12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 SPTY2D1Q68D10 685 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 SPECC1Q5M775 1068 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 TMCO4Q5TGY1 634 aa12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 PNMA8AQ86V59 439 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-205ENST00000366769 OPA1O60313 960 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms