RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 SIPA1L3O60292 1781 aaPredicted RBP10.88□□□□□ -0.67
MRPL55-211ENST00000366738 LTBP3Q9NS15 1303 aa10.87□□□□□ -0.67
MRPL55-211ENST00000366738 SCN4AP35499 1836 aa10.87□□□□□ -0.67
MRPL55-211ENST00000366738 CCER2I3L3R5 266 aa10.87□□□□□ -0.67
MRPL55-211ENST00000366738 EAPPQ56P03 285 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-211ENST00000366738 TBC1D9BQ66K14 1250 aa10.87□□□□□ -0.67
MRPL55-211ENST00000366738 PRR5LQ6MZQ0 368 aa10.87□□□□□ -0.67
MRPL55-211ENST00000366738 TAF1DQ9H5J8 278 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-211ENST00000366738 ADAMTSL1Q8N6G6 1762 aa10.86□□□□□ -0.67
MRPL55-211ENST00000366738 IQCA1LA6NCM1 817 aa10.86□□□□□ -0.67
MRPL55-211ENST00000366738 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-211ENST00000366738 PDE6BP35913 854 aa10.86□□□□□ -0.67
MRPL55-211ENST00000366738 PHACTR3Q96KR7 559 aa10.86□□□□□ -0.67
MRPL55-211ENST00000366738 CFAP53Q96M91 514 aa10.86□□□□□ -0.67
MRPL55-211ENST00000366738 ZNF541Q9H0D2 1346 aa10.85□□□□□ -0.67
MRPL55-211ENST00000366738 ARFGEF2Q9Y6D5 1785 aa10.85□□□□□ -0.67
MRPL55-211ENST00000366738 PDE4DIPQ5VU43 2346 aa10.85□□□□□ -0.67
MRPL55-211ENST00000366738 U2SURPO15042 1029 aaKnown RBP10.85□□□□□ -0.67
MRPL55-211ENST00000366738 PRPF40BQ6NWY9 871 aaKnown RBP10.85□□□□□ -0.67
MRPL55-211ENST00000366738 VSIG10Q8N0Z9 540 aa10.85□□□□□ -0.67
MRPL55-211ENST00000366738 ZNF496Q96IT1 587 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-211ENST00000366738 L3MBTL3Q96JM7 780 aaPredicted RBP10.85□□□□□ -0.67
MRPL55-211ENST00000366738 BRIP1Q9BX63 1249 aa10.85□□□□□ -0.67
MRPL55-211ENST00000366738 CLEC11AQ9Y240 323 aa10.85□□□□□ -0.67
MRPL55-211ENST00000366738 RASSF10A6NK89 507 aa10.84□□□□□ -0.67
MRPL55-211ENST00000366738 CCDC85CA6NKD9 419 aa10.84□□□□□ -0.67
MRPL55-211ENST00000366738 KCNQ3O43525 872 aa10.84□□□□□ -0.67
MRPL55-211ENST00000366738 EIF5P55010 431 aaKnown RBP10.84□□□□□ -0.67
MRPL55-211ENST00000366738 MLLT1Q03111 559 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-211ENST00000366738 RSPH6AQ9H0K4 717 aa10.84□□□□□ -0.67
MRPL55-211ENST00000366738 ZNF330Q9Y3S2 320 aaPredicted RBP10.84□□□□□ -0.67
MRPL55-211ENST00000366738 WDR33Q9C0J8 1336 aaKnown RBP10.84□□□□□ -0.67
MRPL55-211ENST00000366738 TNRC18O15417 2968 aaPredicted RBP10.83□□□□□ -0.68
MRPL55-211ENST00000366738 CEMIPQ8WUJ3 1361 aa10.83□□□□□ -0.68
MRPL55-211ENST00000366738 GNAT3A8MTJ3 354 aa10.83□□□□□ -0.68
MRPL55-211ENST00000366738 MAP1SQ66K74 1059 aaPredicted RBP10.83□□□□□ -0.68
MRPL55-211ENST00000366738 ZNF790Q6PG37 636 aa10.83□□□□□ -0.68
MRPL55-211ENST00000366738 PNISRQ8TF01 805 aaKnown RBP10.83□□□□□ -0.68
MRPL55-211ENST00000366738 CNKSR1Q969H4 720 aa10.83□□□□□ -0.68
MRPL55-211ENST00000366738 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
MRPL55-211ENST00000366738 TBC1D2BQ9UPU7 963 aa10.83□□□□□ -0.68
MRPL55-211ENST00000366738 THSD7BQ9C0I4 1608 aa10.83□□□□□ -0.68
MRPL55-211ENST00000366738 RNF123Q5XPI4 1314 aa10.83□□□□□ -0.68
MRPL55-211ENST00000366738 HEG1Q9ULI3 1381 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 A0A087WZG4 1122 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 SRGNP10124 158 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 PRKAR2BP31323 418 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 EPHX2P34913 555 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 DEFB115Q30KQ5 88 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 STYK1Q6J9G0 422 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 CNBD1Q8NA66 436 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 ZNF277Q9NRM2 450 aaPredicted RBP10.82□□□□□ -0.68
MRPL55-211ENST00000366738 HACL1Q9UJ83 578 aa10.82□□□□□ -0.68
MRPL55-211ENST00000366738 ABT1Q9ULW3 272 aaKnown RBP10.82□□□□□ -0.68
MRPL55-211ENST00000366738 PRAMEF22A3QJZ6 481 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 NPHP1O15259 732 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 U2AF1L5P0DN76 240 aaPredicted RBP10.81□□□□□ -0.68
MRPL55-211ENST00000366738 U2AF1Q01081 240 aaKnown RBP eCLIP10.81□□□□□ -0.68
MRPL55-211ENST00000366738 MAP2K1Q02750 393 aaPredicted RBP10.81□□□□□ -0.68
MRPL55-211ENST00000366738 GRM1Q13255 1194 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 WDR43Q15061 677 aaKnown RBP eCLIP10.81□□□□□ -0.68
MRPL55-211ENST00000366738 SOGA3Q5TF21 947 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 OLFM4Q6UX06 510 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 FAM9BQ8IZU0 186 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 CNTROBQ8N137 903 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 GAS2L2Q8NHY3 880 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 TSKSQ9UJT2 592 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 ADAMTS8Q9UP79 889 aa10.81□□□□□ -0.68
MRPL55-211ENST00000366738 BCORQ6W2J9 1755 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 STARD3NLO95772 234 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 A1BGP04217 495 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 ST5P78524 1137 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 FMR1Q06787 632 aaKnown RBP eCLIP10.8□□□□□ -0.68
MRPL55-211ENST00000366738 TEFQ10587 303 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 CCDC93Q567U6 631 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 PAXIP1Q6ZW49 1069 aaPredicted RBP10.8□□□□□ -0.68
MRPL55-211ENST00000366738 TTC5Q8N0Z6 440 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 C7orf43Q8WVR3 580 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 MASTLQ96GX5 879 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 PCDH10Q9P2E7 1040 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 LTBP1Q14766 1721 aa10.8□□□□□ -0.68
MRPL55-211ENST00000366738 PIP4K2AP48426 406 aaPredicted RBP10.79□□□□□ -0.68
MRPL55-211ENST00000366738 RGS19P49795 217 aa10.79□□□□□ -0.68
MRPL55-211ENST00000366738 FKBP4Q02790 459 aaKnown RBP eCLIP10.79□□□□□ -0.68
MRPL55-211ENST00000366738 CCDC146Q8IYE0 955 aa10.79□□□□□ -0.68
MRPL55-211ENST00000366738 SETDB2Q96T68 719 aa10.79□□□□□ -0.68
MRPL55-211ENST00000366738 NUDCQ9Y266 331 aa10.79□□□□□ -0.68
MRPL55-211ENST00000366738 USP16Q9Y5T5 823 aa10.79□□□□□ -0.68
MRPL55-211ENST00000366738 BTBD11A6QL63 1104 aa10.78□□□□□ -0.68
MRPL55-211ENST00000366738 CAMTA2O94983 1202 aa10.78□□□□□ -0.68
MRPL55-211ENST00000366738 DCTN1Q14203 1278 aa10.78□□□□□ -0.68
MRPL55-211ENST00000366738 CYP4F22Q6NT55 531 aa10.78□□□□□ -0.68
MRPL55-211ENST00000366738 MCM10Q7L590 875 aa10.78□□□□□ -0.68
MRPL55-211ENST00000366738 CAPNS2Q96L46 248 aa10.78□□□□□ -0.68
MRPL55-211ENST00000366738 CFAP44Q96MT7 982 aa10.78□□□□□ -0.68
MRPL55-211ENST00000366738 DDX21Q9NR30 783 aaKnown RBP eCLIP10.78□□□□□ -0.68
MRPL55-211ENST00000366738 COL4A5P29400 1685 aa10.77□□□□□ -0.69
MRPL55-211ENST00000366738 IL6STP40189 918 aaPredicted RBP10.77□□□□□ -0.69
MRPL55-211ENST00000366738 PNMA8AQ86V59 439 aaPredicted RBP10.77□□□□□ -0.69
MRPL55-211ENST00000366738 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms