RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 FAM13BQ9NYF5 915 aa4.94□□□□□ -1.62
RNU6-428P-201ENST00000362942 EPB42P16452 691 aa4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 KCNA1Q09470 495 aa4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 SH3PXD2AQ5TCZ1 1133 aa4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 SAMD5Q5TGI4 173 aa4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 IER5Q5VY09 327 aa4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 ZNF837Q96EG3 531 aaPredicted RBP4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 CFHR5Q9BXR6 569 aa4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 NSFL1CQ9UNZ2 370 aaKnown RBP4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 PCDHGC4Q9Y5F7 938 aa4.93□□□□□ -1.62
RNU6-428P-201ENST00000362942 TGFBR3LH3BV60 316 aa4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 ATXN7O15265 892 aaPredicted RBP4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 VSIG8P0DPA2 414 aa4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 SF3B2Q13435 895 aaKnown RBP4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 DGKZQ13574 1117 aa4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 LAMC2Q13753 1193 aa4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 DBN1Q16643 649 aa4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 LRRC69Q6ZNQ3 347 aa4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 VWA5B2Q8N398 1253 aa4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 SUSD3Q96L08 255 aa4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 QTRT2Q9H974 415 aaKnown RBP4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 ATXN7L1Q9ULK2 861 aaPredicted RBP4.92□□□□□ -1.62
RNU6-428P-201ENST00000362942 CARNS1A5YM72 827 aa4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 WFS1O76024 890 aa4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 FAM157BP0CG42 384 aa4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 NAA30Q147X3 362 aaPredicted RBP4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 ALKBH2Q6NS38 261 aa4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 HELQQ8TDG4 1101 aa4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 GTPBP3Q969Y2 492 aaKnown RBP4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 ZCCHC2Q9C0B9 1178 aaKnown RBP4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 STIM2Q9P246 746 aa4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 SLAIN2Q9P270 581 aa4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 EGFL7Q9UHF1 273 aa4.91□□□□□ -1.62
RNU6-428P-201ENST00000362942 KHNYNO15037 678 aaKnown RBP4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 FAM13AO94988 1023 aa4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 ABL1P00519 1130 aa4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 VEGFBP49765 207 aa4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 NFX1Q12986 1120 aaKnown RBP4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 NEUROD1Q13562 356 aa4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 COX20Q5RI15 118 aa4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 ZNF775Q96BV0 537 aaPredicted RBP4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 IFT43Q96FT9 208 aa4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 CEP63Q96MT8 703 aa4.9□□□□□ -1.63
RNU6-428P-201ENST00000362942 RPLP1P05386 114 aaKnown RBP4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 PCSK2P16519 638 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 MX2P20592 715 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 ARSDP51689 593 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 FKBP4Q02790 459 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 PHLDB3Q6NSJ2 640 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 TREML4Q6UXN2 200 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 BTLAQ7Z6A9 289 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 TTC16Q8NEE8 873 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 GTF3C2Q8WUA4 911 aaPredicted RBP4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 HSH2DQ96JZ2 352 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 EFCC1Q9HA90 598 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 BRD7Q9NPI1 651 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 C11orf16Q9NQ32 467 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 MBIPQ9NS73 344 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 CUEDC1Q9NWM3 386 aaPredicted RBP4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 KLK14Q9P0G3 267 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 MARK1Q9P0L2 795 aa4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 GNEQ9Y223 722 aaKnown RBP4.89□□□□□ -1.63
RNU6-428P-201ENST00000362942 MICAL2O94851 1124 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 MAPTP10636 758 aaKnown RBP4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 FGFR3P22607 806 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 MAP2K3P46734 347 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 IDH3AP50213 366 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 NOM1Q5C9Z4 860 aaKnown RBP4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 FAM182BQ5T319 152 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 TXNDC2Q86VQ3 553 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 TREML1Q86YW5 311 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 AEBP1Q8IUX7 1158 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 GLYCTKQ8IVS8 523 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 C7orf43Q8WVR3 580 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 SEPT3Q9UH03 358 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 LRFN2Q9ULH4 789 aa4.88□□□□□ -1.63
RNU6-428P-201ENST00000362942 DCDC2BA2VCK2 349 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 BNIP3LO60238 219 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 BMP4P12644 408 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 KCNQ4P56696 695 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 TNP2Q05952 138 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 TYRO3Q06418 890 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 AAMPQ13685 434 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 UBAP2LQ14157 1087 aaKnown RBP4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 ZNF280CQ8ND82 737 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 PIK3R5Q8WYR1 880 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 ABHD17AQ96GS6 310 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 SAP130Q9H0E3 1048 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 NDFIP2Q9NV92 336 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 KCNH4Q9UQ05 1017 aa4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 FNDC3AQ9Y2H6 1198 aaKnown RBP4.87□□□□□ -1.63
RNU6-428P-201ENST00000362942 ZBTB7CA1YPR0 619 aa4.86□□□□□ -1.63
RNU6-428P-201ENST00000362942 H3BRB1 525 aa4.86□□□□□ -1.63
RNU6-428P-201ENST00000362942 GPR25O00155 361 aa4.86□□□□□ -1.63
RNU6-428P-201ENST00000362942 EFSO43281 561 aa4.86□□□□□ -1.63
RNU6-428P-201ENST00000362942 ICMTO60725 284 aa4.86□□□□□ -1.63
RNU6-428P-201ENST00000362942 NPR3P17342 541 aa4.86□□□□□ -1.63
RNU6-428P-201ENST00000362942 ZAP70P43403 619 aa4.86□□□□□ -1.63
RNU6-428P-201ENST00000362942 SRSF11Q05519 484 aaKnown RBP4.86□□□□□ -1.63
RNU6-428P-201ENST00000362942 CAPN12Q6ZSI9 719 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms