RNA–Protein interactions for RNA: ENST00000361587.3

HIPK1-202, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best)

Gene HIPK1, Length 5,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-202ENST00000361587 TNPO1Q92973 898 aaKnown RBP12.23□□□□□ -0.45
HIPK1-202ENST00000361587 FERMT1Q9BQL6 677 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 BOLA2Q9H3K6 86 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 NSD2O96028 1365 aa12.23□□□□□ -0.45
HIPK1-202ENST00000361587 CBX1P83916 185 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 DYNC1I1O14576 645 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 TUBB4AP04350 444 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 UBA5Q9GZZ9 404 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 RMND1Q9NWS8 449 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 UBE2HP62256 183 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 CTNNBL1Q8WYA6 563 aaPredicted RBP12.22□□□□□ -0.45
HIPK1-202ENST00000361587 NUDT16Q96DE0 195 aaKnown RBP12.22□□□□□ -0.45
HIPK1-202ENST00000361587 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.22□□□□□ -0.45
HIPK1-202ENST00000361587 USP25Q9UHP3 1055 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 FSD2A1L4K1 749 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 CTNNA2P26232 953 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 TMC6Q7Z403 805 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 CEP112Q8N8E3 955 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 ZSCAN16Q9H4T2 348 aaPredicted RBP12.22□□□□□ -0.45
HIPK1-202ENST00000361587 PRXQ9BXM0 1461 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 SPATA24Q86W54 205 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 DNAAF4Q8WXU2 420 aa12.22□□□□□ -0.45
HIPK1-202ENST00000361587 IFIT3O14879 490 aaKnown RBP12.21□□□□□ -0.45
HIPK1-202ENST00000361587 STX6O43752 255 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 SSFA2P28290 1259 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 HLTFQ14527 1009 aaKnown RBP eCLIP12.21□□□□□ -0.45
HIPK1-202ENST00000361587 MYD88Q99836 296 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 BMP15O95972 392 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
HIPK1-202ENST00000361587 BMP2KLQ5H9B9 411 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 SSH1Q8WYL5 1049 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 SCLT1Q96NL6 688 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 CCDC40Q4G0X9 1142 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 TMOD3Q9NYL9 352 aa12.21□□□□□ -0.45
HIPK1-202ENST00000361587 BCCIPQ9P287 314 aaKnown RBP eCLIP12.21□□□□□ -0.45
HIPK1-202ENST00000361587 FERMT2Q96AC1 680 aa12.21□□□□□ -0.46
HIPK1-202ENST00000361587 CCDC96Q2M329 555 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 SPINK5Q9NQ38 1064 aaPredicted RBP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 CTAGE1Q96RT6 745 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 PLVAPQ9BX97 442 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 SMARCA5O60264 1052 aaPredicted RBP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 RANBP6O60518 1105 aaKnown RBP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 WDHD1O75717 1129 aaPredicted RBP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 ADCY5O95622 1261 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 GJB2P29033 226 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 C16orf45Q96MC5 204 aaPredicted RBP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 TBC1D2Q9BYX2 928 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 KLHL40Q2TBA0 621 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 ECHDC1Q9NTX5 307 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 IARSP41252 1262 aaKnown RBP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 CCDC102BQ68D86 513 aa12.2□□□□□ -0.46
HIPK1-202ENST00000361587 DBF4Q9UBU7 674 aaPredicted RBP12.2□□□□□ -0.46
HIPK1-202ENST00000361587 TMCO5BA8MYB1 307 aa12.19□□□□□ -0.46
HIPK1-202ENST00000361587 HSF2BPO75031 334 aa12.19□□□□□ -0.46
HIPK1-202ENST00000361587 CEP135Q66GS9 1140 aa12.19□□□□□ -0.46
HIPK1-202ENST00000361587 TSNARE1Q96NA8 513 aa12.19□□□□□ -0.46
HIPK1-202ENST00000361587 UBE4AQ14139 1066 aa12.19□□□□□ -0.46
HIPK1-202ENST00000361587 CKAP2LQ8IYA6 745 aa12.19□□□□□ -0.46
HIPK1-202ENST00000361587 NSRP1Q9H0G5 558 aaKnown RBP12.19□□□□□ -0.46
HIPK1-202ENST00000361587 ZPR1O75312 459 aa12.19□□□□□ -0.46
HIPK1-202ENST00000361587 DHX37Q8IY37 1157 aaKnown RBP12.19□□□□□ -0.46
HIPK1-202ENST00000361587 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
HIPK1-202ENST00000361587 LDHCP07864 332 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 FERP16591 822 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 TUBB4BP68371 445 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 SREK1Q8WXA9 508 aaKnown RBP12.18□□□□□ -0.46
HIPK1-202ENST00000361587 ZNF165P49910 485 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 MAATS1Q7Z4T9 603 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 HOMER2Q9NSB8 354 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 TRMT1Q9NXH9 659 aaKnown RBP12.18□□□□□ -0.46
HIPK1-202ENST00000361587 SPAG1Q07617 926 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 CCDC155Q8N6L0 562 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 CPLX3Q8WVH0 158 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 MCM10Q7L590 875 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 PRPHP41219 470 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 IL16Q14005 1332 aa12.18□□□□□ -0.46
HIPK1-202ENST00000361587 EPRSP07814 1512 aaKnown RBP12.18□□□□□ -0.46
HIPK1-202ENST00000361587 PDE4BQ07343 736 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 NCOA7Q8NI08 942 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 IVLP07476 585 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 GUCY1B3Q02153 619 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 PPP4R3BQ5MIZ7 849 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 BICDL1Q6ZP65 573 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 TEX13AQ9BXU3 409 aaPredicted RBP12.17□□□□□ -0.46
HIPK1-202ENST00000361587 PPP1R1BQ9UD71 204 aaPredicted RBP12.17□□□□□ -0.46
HIPK1-202ENST00000361587 USP16Q9Y5T5 823 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 MACROD2A1Z1Q3 448 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 GTF2F1P35269 517 aaKnown RBP eCLIP12.17□□□□□ -0.46
HIPK1-202ENST00000361587 ACTN2P35609 894 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 CYLC1P35663 651 aaPredicted RBP12.17□□□□□ -0.46
HIPK1-202ENST00000361587 STMN4Q9H169 189 aaPredicted RBP12.17□□□□□ -0.46
HIPK1-202ENST00000361587 UBA7P41226 1012 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 TRAF1Q13077 416 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 USP37Q86T82 979 aa12.17□□□□□ -0.46
HIPK1-202ENST00000361587 SRRTQ9BXP5 876 aaKnown RBP12.17□□□□□ -0.46
HIPK1-202ENST00000361587 TTC12Q9H892 705 aaPredicted RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms