RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 BABAM1Q9NWV8 329 aa15.76■□□□□ 0.11
LDB3-202ENST00000361373 ZGPATQ8N5A5 531 aaKnown RBP15.75■□□□□ 0.11
LDB3-202ENST00000361373 RANBP6O60518 1105 aaKnown RBP15.75■□□□□ 0.11
LDB3-202ENST00000361373 LINS1Q8NG48 757 aa15.75■□□□□ 0.11
LDB3-202ENST00000361373 MCM4P33991 863 aa15.75■□□□□ 0.11
LDB3-202ENST00000361373 COPS6Q7L5N1 327 aa15.75■□□□□ 0.11
LDB3-202ENST00000361373 CATIPQ7Z7H3 387 aa15.75■□□□□ 0.11
LDB3-202ENST00000361373 C8orf76Q96K31 380 aa15.75■□□□□ 0.11
LDB3-202ENST00000361373 SETDB2Q96T68 719 aa15.75■□□□□ 0.11
LDB3-202ENST00000361373 UPF3BQ9BZI7 483 aaKnown RBP15.75■□□□□ 0.11
LDB3-202ENST00000361373 CHPF2Q9P2E5 772 aa15.75■□□□□ 0.11
LDB3-202ENST00000361373 PDE4BQ07343 736 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 PPP4R3BQ5MIZ7 849 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 CAGE1Q8TC20 777 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 RHPN1Q8TCX5 695 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 NPC1L1Q9UHC9 1359 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 GRM8O00222 908 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 BRPF1P55201 1214 aaPredicted RBP15.74■□□□□ 0.11
LDB3-202ENST00000361373 CCDC12Q8WUD4 166 aaPredicted RBP15.74■□□□□ 0.11
LDB3-202ENST00000361373 NLRP3Q96P20 1036 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 KIF5BP33176 963 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 IL15P40933 162 aaPredicted RBP15.74■□□□□ 0.11
LDB3-202ENST00000361373 TNNT3P45378 269 aaPredicted RBP15.74■□□□□ 0.11
LDB3-202ENST00000361373 ANKRD18AQ8IVF6 992 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 NYXQ9GZU5 481 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 MAP3K5Q99683 1374 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 IFIT3O14879 490 aaKnown RBP15.74■□□□□ 0.11
LDB3-202ENST00000361373 ATP6V1AP38606 617 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 HSP90B2PQ58FF3 399 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 CCDC83Q8IWF9 413 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 DDX11Q96FC9 970 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 EHMT1Q9H9B1 1298 aa15.74■□□□□ 0.11
LDB3-202ENST00000361373 SSBP05455 408 aaKnown RBP eCLIP15.74■□□□□ 0.11
LDB3-202ENST00000361373 GOLIM4O00461 696 aa15.73■□□□□ 0.11
LDB3-202ENST00000361373 PDCL3Q9H2J4 239 aa15.73■□□□□ 0.11
LDB3-202ENST00000361373 CCDC178Q5BJE1 867 aa15.73■□□□□ 0.11
LDB3-202ENST00000361373 ANKRD44Q8N8A2 993 aa15.73■□□□□ 0.11
LDB3-202ENST00000361373 HSP90AA2PQ14568 343 aaPredicted RBP15.73■□□□□ 0.11
LDB3-202ENST00000361373 HLA-DOAP06340 250 aa15.73■□□□□ 0.11
LDB3-202ENST00000361373 MTHFSDQ2M296 383 aaKnown RBP15.73■□□□□ 0.11
LDB3-202ENST00000361373 CUL5Q93034 780 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 NCKAP5LQ9HCH0 1330 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 CEP170Q5SW79 1584 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 ABCA5Q8WWZ7 1642 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 PCDH11XQ9BZA7 1347 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 PCDH11YQ9BZA8 1340 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 A0A1W2PP64 1363 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 MAP3K11Q16584 847 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 TTC22Q5TAA0 569 aa15.72■□□□□ 0.11
LDB3-202ENST00000361373 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
LDB3-202ENST00000361373 MAST1Q9Y2H9 1570 aa15.71■□□□□ 0.11
LDB3-202ENST00000361373 ATP8B2P98198 1209 aa15.71■□□□□ 0.11
LDB3-202ENST00000361373 TRAF1Q13077 416 aa15.71■□□□□ 0.11
LDB3-202ENST00000361373 CRNKL1Q9BZJ0 848 aaKnown RBP15.71■□□□□ 0.11
LDB3-202ENST00000361373 TANGO6Q9C0B7 1094 aa15.71■□□□□ 0.11
LDB3-202ENST00000361373 GOLGA8AA7E2F4 631 aa15.71■□□□□ 0.11
LDB3-202ENST00000361373 GOLGA8BA8MQT2 603 aa15.71■□□□□ 0.11
LDB3-202ENST00000361373 PPP1R12BO60237 982 aaPredicted RBP15.71■□□□□ 0.11
LDB3-202ENST00000361373 SSRP1Q08945 709 aaKnown RBP15.71■□□□□ 0.11
LDB3-202ENST00000361373 EDC4Q6P2E9 1401 aaKnown RBP15.71■□□□□ 0.11
LDB3-202ENST00000361373 FBLN1P23142 703 aa15.71■□□□□ 0.1
LDB3-202ENST00000361373 EYA1Q99502 592 aa15.71■□□□□ 0.1
LDB3-202ENST00000361373 DEF6Q9H4E7 631 aa15.71■□□□□ 0.1
LDB3-202ENST00000361373 CABP5Q9NP86 173 aa15.71■□□□□ 0.1
LDB3-202ENST00000361373 HOXC9P31274 260 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 ATP2B3Q16720 1220 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 SIRT1Q96EB6 747 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 PBRM1Q86U86 1689 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 CCDC96Q2M329 555 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 TMEM266Q2M3C6 531 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 KIF20AO95235 890 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 NCOA7Q8NI08 942 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 C8orf37Q96NL8 207 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 UTP14AQ9BVJ6 771 aaKnown RBP15.7■□□□□ 0.1
LDB3-202ENST00000361373 PZPP20742 1482 aa15.7■□□□□ 0.1
LDB3-202ENST00000361373 CCDC194A0A1B0GVG4 234 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 NUCB1Q02818 461 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 TPTE2Q6XPS3 522 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 MAP3K19Q56UN5 1328 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 MFSD6Q6ZSS7 791 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 TMTC2Q8N394 836 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.69■□□□□ 0.1
LDB3-202ENST00000361373 CTAGE5O15320 804 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 ANXA1P04083 346 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 MEIS3Q99687 375 aa15.69■□□□□ 0.1
LDB3-202ENST00000361373 PYM1Q9BRP8 204 aaKnown RBP15.69■□□□□ 0.1
LDB3-202ENST00000361373 MYO1BO43795 1136 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 HOXB7P09629 217 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 SLC39A6Q13433 755 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 C8orf58Q8NAV2 365 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 SBNO1A3KN83 1393 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 HSPA2P54652 639 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 TBC1D9Q6ZT07 1266 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 MTERF4Q7Z6M4 381 aaKnown RBP15.68■□□□□ 0.1
LDB3-202ENST00000361373 LMBR1LQ6UX01 489 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.1
LDB3-202ENST00000361373 NEK1Q96PY6 1258 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 DNAI2Q9GZS0 605 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 LMTK3Q96Q04 1460 aa15.68■□□□□ 0.1
LDB3-202ENST00000361373 SETQ01105 290 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms