RNA–Protein interactions for RNA: ENST00000359644.7

ATP2C1-202, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP2C1, Length 3,401 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-202ENST00000359644 SPDYE2Q495Y8 402 aa4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 CCDC87Q9NVE4 849 aa4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 COL4A5P29400 1685 aa4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 RPS6KA4O75676 772 aa4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 ITGBL1O95965 494 aaPredicted RBP4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 MS4A1P11836 297 aa4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 C8orf34Q49A92 452 aa4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 DALRD3Q5D0E6 543 aaKnown RBP4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 PAXIP1Q6ZW49 1069 aaPredicted RBP4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 C16orf71Q8IYS4 520 aaPredicted RBP4.44□□□□□ -1.7
ATP2C1-202ENST00000359644 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.44□□□□□ -1.71e-6■■■□□ 15.2
ATP2C1-202ENST00000359644 FYB1O15117 783 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 VEGFAP15692 232 aaPredicted RBP4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 PHKG2P15735 406 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 CHRNA5P30532 468 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 RRS1Q15050 365 aaKnown RBP4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 HSP90AB2PQ58FF8 381 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 SPDYE4A6NLX3 237 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 TATP17735 454 aaPredicted RBP4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 VEGFBP49765 207 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 LAMB1P07942 1786 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 LTBP3Q9NS15 1303 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 ST20-MTHFSA0A0A6YYL1 179 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 RASSF10A6NK89 507 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 LMNB1P20700 586 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 ATP6V1AP38606 617 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 CTCFP49711 727 aaPredicted RBP4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 TRAPPC3LQ5T215 181 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 INTS5Q6P9B9 1019 aaKnown RBP4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 BCL2L12Q9HB09 334 aa4.43□□□□□ -1.7
ATP2C1-202ENST00000359644 RBBP6Q7Z6E9 1792 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 L3MBTL3Q96JM7 780 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 SEC24BO95487 1268 aa4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 LBX1P52954 281 aa4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 CHADLQ6NUI6 762 aa4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 HDGFL2Q7Z4V5 671 aaPredicted RBP4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 SRP68Q9UHB9 627 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 MKRN1Q9UHC7 482 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 RGS3P49796 1198 aa4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 RTCBQ9Y3I0 505 aaKnown RBP4.42□□□□□ -1.7
ATP2C1-202ENST00000359644 MYBBP1AQ9BQG0 1328 aaKnown RBP4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 RAPGEF4Q8WZA2 1011 aa4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 COG3Q96JB2 828 aa4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 TERF2IPQ9NYB0 399 aa4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 SSUH2Q9Y2M2 353 aa4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 PARP3Q9Y6F1 533 aa4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 SOS1Q07889 1333 aaPredicted RBP4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 AMPHP49418 695 aa4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 MLLT1Q03111 559 aaPredicted RBP4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 FAM43AQ8N2R8 423 aa4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 DDRGK1Q96HY6 314 aa4.41□□□□□ -1.7
ATP2C1-202ENST00000359644 ERVV-2B6SEH9 535 aa4.4□□□□□ -1.7
ATP2C1-202ENST00000359644 CC2D1BQ5T0F9 858 aaKnown RBP4.4□□□□□ -1.7
ATP2C1-202ENST00000359644 EYA1Q99502 592 aa4.4□□□□□ -1.7
ATP2C1-202ENST00000359644 CARD11Q9BXL7 1154 aa4.4□□□□□ -1.7
ATP2C1-202ENST00000359644 TMOD3Q9NYL9 352 aa4.4□□□□□ -1.7
ATP2C1-202ENST00000359644 PKNOX2Q96KN3 472 aa4.4□□□□□ -1.71
ATP2C1-202ENST00000359644 PER1O15534 1290 aaPredicted RBP4.4□□□□□ -1.71
ATP2C1-202ENST00000359644 CRKLP46109 303 aaKnown RBP4.4□□□□□ -1.71
ATP2C1-202ENST00000359644 C7orf43Q8WVR3 580 aa4.4□□□□□ -1.71
ATP2C1-202ENST00000359644 RSPH6AQ9H0K4 717 aa4.4□□□□□ -1.71
ATP2C1-202ENST00000359644 EMILIN1Q9Y6C2 1016 aa4.4□□□□□ -1.71
ATP2C1-202ENST00000359644 CASP8AP2Q9UKL3 1982 aa4.4□□□□□ -1.71
ATP2C1-202ENST00000359644 PLCB2Q00722 1185 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 CARD14Q9BXL6 1004 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 PANK2Q9BZ23 570 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 SLKQ9H2G2 1235 aaPredicted RBP4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 ZNF646O15015 1829 aaPredicted RBP4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 TMEM88BA6NKF7 163 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 TULP1O00294 542 aaPredicted RBP4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 NFIXQ14938 502 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 LDHDQ86WU2 507 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 IFNL2Q8IZJ0 200 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 TAF1DQ9H5J8 278 aaPredicted RBP4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 SPG7Q9UQ90 795 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 LAMB2P55268 1798 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 IGHDP01880 384 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 RFC4P35249 363 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 RBM42Q9BTD8 480 aaKnown RBP4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 ZMYND15Q9H091 742 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 GGNBP2Q9H3C7 697 aa4.39□□□□□ -1.71
ATP2C1-202ENST00000359644 HTTP42858 3142 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 WDR33Q9C0J8 1336 aaKnown RBP4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 BRCA2P51587 3418 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 RALBP1Q15311 655 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 ADAMTS8Q9UP79 889 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 DDNO94850 711 aaPredicted RBP4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 VSIG10Q8N0Z9 540 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 TTLL6Q8N841 843 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 ZNF541Q9H0D2 1346 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 KDM3BQ7LBC6 1761 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 COL15A1P39059 1388 aa4.38□□□□□ -1.71
ATP2C1-202ENST00000359644 LAMB4A4D0S4 1761 aa4.37□□□□□ -1.71
ATP2C1-202ENST00000359644 CYP19A1P11511 503 aaPredicted RBP4.37□□□□□ -1.71
ATP2C1-202ENST00000359644 DUSP27Q5VZP5 1158 aa4.37□□□□□ -1.71
ATP2C1-202ENST00000359644 USPL1Q5W0Q7 1092 aa4.37□□□□□ -1.71
ATP2C1-202ENST00000359644 SPRYD3Q8NCJ5 442 aa4.37□□□□□ -1.71
ATP2C1-202ENST00000359644 NARFQ9UHQ1 456 aa4.37□□□□□ -1.71
ATP2C1-202ENST00000359644 MKI67P46013 3256 aaKnown RBP4.37□□□□□ -1.71
ATP2C1-202ENST00000359644 SZT2Q5T011 3432 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms