RNA–Protein interactions for RNA: ENST00000358994.8

PTPA-206, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPA, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-206ENST00000358994 ATP7BP35670 1465 aa21.5■■□□□ 1.03
PTPA-206ENST00000358994 MIS18AQ9NYP9 233 aa21.5■■□□□ 1.03
PTPA-206ENST00000358994 AATKQ6ZMQ8 1374 aa21.49■■□□□ 1.03
PTPA-206ENST00000358994 FAM173BQ6P4H8 233 aa21.49■■□□□ 1.03
PTPA-206ENST00000358994 KRT85P78386 507 aa21.48■■□□□ 1.03
PTPA-206ENST00000358994 ELF2Q15723 593 aa21.48■■□□□ 1.03
PTPA-206ENST00000358994 MYO5BQ9ULV0 1848 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 ARID5BQ14865 1188 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 NYAP1Q6ZVC0 841 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 LRRC8AQ8IWT6 810 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 ELP1O95163 1332 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 ERBB3P21860 1342 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 TULP2O00295 520 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 CAPN2P17655 700 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 SULT6B1Q6IMI4 303 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 RBM43Q6ZSC3 357 aaKnown RBP21.47■■□□□ 1.03
PTPA-206ENST00000358994 FERMT3Q86UX7 667 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 CALCOCO1Q9P1Z2 691 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 SPG7Q9UQ90 795 aa21.47■■□□□ 1.03
PTPA-206ENST00000358994 ZNF165P49910 485 aa21.46■■□□□ 1.03
PTPA-206ENST00000358994 PI4K2BQ8TCG2 481 aa21.46■■□□□ 1.03
PTPA-206ENST00000358994 ZNF446Q9NWS9 450 aa21.46■■□□□ 1.03
PTPA-206ENST00000358994 CCDC171Q6TFL3 1326 aa21.46■■□□□ 1.03
PTPA-206ENST00000358994 GNAI3P08754 354 aa21.46■■□□□ 1.03
PTPA-206ENST00000358994 SLC20A2Q08357 652 aa21.46■■□□□ 1.03
PTPA-206ENST00000358994 DNAJC25Q9H1X3 360 aa21.46■■□□□ 1.03
PTPA-206ENST00000358994 PTPN14Q15678 1187 aa21.45■■□□□ 1.02
PTPA-206ENST00000358994 ADCK5Q3MIX3 580 aa21.45■■□□□ 1.02
PTPA-206ENST00000358994 CDC37L1Q7L3B6 337 aa21.45■■□□□ 1.02
PTPA-206ENST00000358994 ERO1AQ96HE7 468 aa21.45■■□□□ 1.02
PTPA-206ENST00000358994 LRRFIP2Q9Y608 721 aaKnown RBP21.45■■□□□ 1.02
PTPA-206ENST00000358994 NECAB1Q8N987 351 aa21.45■■□□□ 1.02
PTPA-206ENST00000358994 PDRG1Q9NUG6 133 aa21.45■■□□□ 1.02
PTPA-206ENST00000358994 CRB1P82279 1406 aa21.45■■□□□ 1.02
PTPA-206ENST00000358994 TTC21AQ8NDW8 1320 aa21.45■■□□□ 1.02
PTPA-206ENST00000358994 ME3Q16798 604 aa21.44■■□□□ 1.02
PTPA-206ENST00000358994 SLFNL1Q499Z3 407 aa21.44■■□□□ 1.02
PTPA-206ENST00000358994 CWC27Q6UX04 472 aaKnown RBP21.44■■□□□ 1.02
PTPA-206ENST00000358994 KIF1BPQ96EK5 621 aa21.44■■□□□ 1.02
PTPA-206ENST00000358994 CDC25BP30305 580 aa21.44■■□□□ 1.02
PTPA-206ENST00000358994 VPS53Q5VIR6 699 aa21.44■■□□□ 1.02
PTPA-206ENST00000358994 LARP1BQ659C4 914 aaKnown RBP21.44■■□□□ 1.02
PTPA-206ENST00000358994 ZSCAN31Q96LW9 406 aaPredicted RBP21.44■■□□□ 1.02
PTPA-206ENST00000358994 CLSTN2Q9H4D0 955 aa21.44■■□□□ 1.02
PTPA-206ENST00000358994 SH2B1Q9NRF2 756 aaPredicted RBP21.44■■□□□ 1.02
PTPA-206ENST00000358994 DNAJC2Q99543 621 aaKnown RBP21.43■■□□□ 1.02
PTPA-206ENST00000358994 EDC4Q6P2E9 1401 aaKnown RBP21.43■■□□□ 1.02
PTPA-206ENST00000358994 MAPK8IP2Q13387 824 aaPredicted RBP21.43■■□□□ 1.02
PTPA-206ENST00000358994 JAKMIP1Q96N16 626 aaKnown RBP21.43■■□□□ 1.02
PTPA-206ENST00000358994 DDX19AQ9NUU7 478 aaKnown RBP21.43■■□□□ 1.02
PTPA-206ENST00000358994 FAM193AP78312 1265 aa21.42■■□□□ 1.02
PTPA-206ENST00000358994 PLCD3Q8N3E9 789 aa21.42■■□□□ 1.02
PTPA-206ENST00000358994 COG3Q96JB2 828 aa21.42■■□□□ 1.02
PTPA-206ENST00000358994 TFIP11Q9UBB9 837 aaKnown RBP21.42■■□□□ 1.02
PTPA-206ENST00000358994 SOS1Q07889 1333 aaPredicted RBP21.41■■□□□ 1.02
PTPA-206ENST00000358994 SKILP12757 684 aa21.41■■□□□ 1.02
PTPA-206ENST00000358994 EIF4A2Q14240 407 aaKnown RBP21.41■■□□□ 1.02
PTPA-206ENST00000358994 WAPLQ7Z5K2 1190 aa21.41■■□□□ 1.02
PTPA-206ENST00000358994 GOLGA6L4A6NEF3 574 aa21.41■■□□□ 1.02
PTPA-206ENST00000358994 NR1I2O75469 434 aa21.41■■□□□ 1.02
PTPA-206ENST00000358994 CYP2C19P33261 490 aa21.41■■□□□ 1.02
PTPA-206ENST00000358994 DDX54Q8TDD1 881 aaKnown RBP21.41■■□□□ 1.02
PTPA-206ENST00000358994 ZSWIM6Q9HCJ5 1215 aa21.41■■□□□ 1.02
PTPA-206ENST00000358994 TRMT1Q9NXH9 659 aaKnown RBP21.41■■□□□ 1.02
PTPA-206ENST00000358994 NPHP1O15259 732 aa21.4■■□□□ 1.02
PTPA-206ENST00000358994 SLU7O95391 586 aaKnown RBP21.4■■□□□ 1.02
PTPA-206ENST00000358994 PTH1RQ03431 593 aa21.4■■□□□ 1.02
PTPA-206ENST00000358994 NOL10Q9BSC4 688 aaKnown RBP21.4■■□□□ 1.02
PTPA-206ENST00000358994 NPHP3Q7Z494 1330 aa21.4■■□□□ 1.02
PTPA-206ENST00000358994 CREBRFQ8IUR6 639 aa21.4■■□□□ 1.02
PTPA-206ENST00000358994 CNTROBQ8N137 903 aa21.4■■□□□ 1.02
PTPA-206ENST00000358994 SPATA32Q96LK8 384 aa21.4■■□□□ 1.02
PTPA-206ENST00000358994 CYP46A1Q9Y6A2 500 aa21.4■■□□□ 1.02
PTPA-206ENST00000358994 FLIIQ13045 1269 aa21.39■■□□□ 1.01
PTPA-206ENST00000358994 PRPF40BQ6NWY9 871 aaKnown RBP21.39■■□□□ 1.01
PTPA-206ENST00000358994 TPCN1Q9ULQ1 816 aa21.39■■□□□ 1.01
PTPA-206ENST00000358994 NEMFO60524 1076 aa21.39■■□□□ 1.01
PTPA-206ENST00000358994 CCZ1BP86790 482 aa21.39■■□□□ 1.01
PTPA-206ENST00000358994 CCZ1P86791 482 aaPredicted RBP21.39■■□□□ 1.01
PTPA-206ENST00000358994 LEO1Q8WVC0 666 aaPredicted RBP21.39■■□□□ 1.01
PTPA-206ENST00000358994 SCAND2PQ9GZW5 306 aaPredicted RBP21.39■■□□□ 1.01
PTPA-206ENST00000358994 TSPYL4Q9UJ04 414 aa21.39■■□□□ 1.01
PTPA-206ENST00000358994 ARHGEF10O15013 1369 aa21.38■■□□□ 1.01
PTPA-206ENST00000358994 HNRNPH2P55795 449 aaKnown RBP21.38■■□□□ 1.01
PTPA-206ENST00000358994 IQCB1Q15051 598 aa21.38■■□□□ 1.01
PTPA-206ENST00000358994 SARM1Q6SZW1 724 aa21.38■■□□□ 1.01
PTPA-206ENST00000358994 H2AFXP16104 143 aaPredicted RBP21.38■■□□□ 1.01
PTPA-206ENST00000358994 CCAR2Q8N163 923 aaKnown RBP21.38■■□□□ 1.01
PTPA-206ENST00000358994 SSH3Q8TE77 659 aa21.38■■□□□ 1.01
PTPA-206ENST00000358994 TRERF1Q96PN7 1200 aa21.38■■□□□ 1.01
PTPA-206ENST00000358994 TM6SF1Q9BZW5 370 aa21.38■■□□□ 1.01
PTPA-206ENST00000358994 ALKQ9UM73 1620 aa21.38■■□□□ 1.01
PTPA-206ENST00000358994 CPS1P31327 1500 aa21.38■■□□□ 1.01
PTPA-206ENST00000358994 XRN1Q8IZH2 1706 aaKnown RBP21.37■■□□□ 1.01
PTPA-206ENST00000358994 BMS1Q14692 1282 aaKnown RBP21.37■■□□□ 1.01
PTPA-206ENST00000358994 RHPN1Q8TCX5 695 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 MRFAP1L1Q96HT8 127 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 PGBD1Q96JS3 809 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 USP44Q9H0E7 712 aa21.37■■□□□ 1.01
PTPA-206ENST00000358994 TTC21BQ7Z4L5 1316 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms