RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 NAA16Q6N069 864 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 CEP128Q6ZU80 1094 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 ECHDC1Q9NTX5 307 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 ATP10AO60312 1499 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 ITSN2Q9NZM3 1697 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 ALDH1L1O75891 902 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 SRGAP3O43295 1099 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 TYRO3Q06418 890 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 A0A1B0GUA9 196 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 PSDA5PKW4 1024 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 NPHP1O15259 732 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 HOXB7P09629 217 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 TTC31Q49AM3 519 aaPredicted RBP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC51Q96ER9 411 aa4.76□□□□□ -1.65
SYNE2-204ENST00000358025 SAFB2Q14151 953 aaKnown RBP eCLIP4.76□□□□□ -1.65
SYNE2-204ENST00000358025 VPS37CA5D8V6 355 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-204ENST00000358025 RMND1Q9NWS8 449 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC158Q5M9N0 1113 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 CFAP58Q5T655 872 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 ANKRD7Q92527 254 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 MAGEC2Q9UBF1 373 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-204ENST00000358025 PDE6BP35913 854 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 DNMT1P26358 1616 aaKnown RBP4.75□□□□□ -1.65
SYNE2-204ENST00000358025 KIAA1524Q8TCG1 905 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 TRIM22Q8IYM9 498 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 DNAI1Q9UI46 699 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 URI1O94763 535 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-204ENST00000358025 NEFHP12036 1026 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC175P0C221 793 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 UBASH3AP57075 661 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 TMCO5BA8MYB1 307 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 ZNF75DP51815 510 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 PLEKHO1Q53GL0 409 aaPredicted RBP4.75□□□□□ -1.65
SYNE2-204ENST00000358025 HYPKQ9NX55 129 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 UHRF1BP1LA0JNW5 1464 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 ERCC3P19447 782 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 KRT83P78385 493 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 SPA17Q15506 151 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 CLASP1Q7Z460 1538 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 PPFIA1Q13136 1202 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 ERICH2A1L162 156 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 ARHGAP29Q52LW3 1261 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 ZSCAN25Q6NSZ9 544 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 GCC2Q8IWJ2 1684 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 TOP1P11387 765 aaKnown RBP4.75□□□□□ -1.65
SYNE2-204ENST00000358025 RRP12Q5JTH9 1297 aaKnown RBP4.75□□□□□ -1.65
SYNE2-204ENST00000358025 NESP48681 1621 aa4.75□□□□□ -1.65
SYNE2-204ENST00000358025 ARFGAP2Q8N6H7 521 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 ARHGEF11O15085 1522 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 CCDC151A5D8V7 595 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 APBB1O00213 710 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 ABCC2Q92887 1545 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 SLC8A1P32418 973 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 MUM1L1Q5H9M0 696 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 C10orf67Q8IYJ2 551 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 GOLGA1Q92805 767 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 KIF14Q15058 1648 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 CASTP20810 708 aaKnown RBP4.74□□□□□ -1.65
SYNE2-204ENST00000358025 NEK1Q96PY6 1258 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 AKAP2Q9Y2D5 859 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 IKBKBO14920 756 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 NBPF9Q3BBW0 867 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 SPECC1LQ69YQ0 1117 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 RETREG2Q8NC44 543 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 RNF14Q9UBS8 474 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 SETSIPP0DME0 302 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 PAFAH1B1P43034 410 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 TCP11Q8WWU5 503 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 SLC4A2P04920 1241 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 PRKAR2BP31323 418 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 C3orf20Q8ND61 904 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 C16orf45Q96MC5 204 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-204ENST00000358025 CACNA1FO60840 1977 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 CTIFO43310 598 aaKnown RBP4.74□□□□□ -1.65
SYNE2-204ENST00000358025 OTUD6BQ8N6M0 293 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 TRIML1Q8N9V2 468 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 JAKMIP1Q96N16 626 aaKnown RBP4.74□□□□□ -1.65
SYNE2-204ENST00000358025 ARHGAP6O43182 974 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 SARNPP82979 210 aaKnown RBP4.74□□□□□ -1.65
SYNE2-204ENST00000358025 GBP1P32455 592 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 ZNF330Q9Y3S2 320 aaPredicted RBP4.74□□□□□ -1.65
SYNE2-204ENST00000358025 ZSCAN26Q16670 478 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 BCCIPQ9P287 314 aaKnown RBP eCLIP4.74□□□□□ -1.65
SYNE2-204ENST00000358025 DDIT3P35638 169 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 WHAMMP3Q1A5X7 153 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 AMOTQ4VCS5 1084 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 TMTC1Q8IUR5 882 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 MRPL50Q8N5N7 158 aaKnown RBP4.74□□□□□ -1.65
SYNE2-204ENST00000358025 FAM135BQ49AJ0 1406 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 CTAGE15A4D2H0 777 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 CTAGE8P0CG41 777 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 MAGEA9P43362 315 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 CTAGE6Q86UF2 777 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 CTAGE4Q8IX94 777 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 GIMAP7Q8NHV1 300 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 TAOK3Q9H2K8 898 aa4.74□□□□□ -1.65
SYNE2-204ENST00000358025 APLFQ8IW19 511 aaPredicted RBP4.73□□□□□ -1.65
SYNE2-204ENST00000358025 TSKSQ9UJT2 592 aa4.73□□□□□ -1.65
SYNE2-204ENST00000358025 PZPP20742 1482 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms