RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 IGKV5-2P06315 115 aa21.4■■□□□ 1.02
TPM1-205ENST00000357980 CWF19L2Q2TBE0 894 aaKnown RBP21.4■■□□□ 1.02
TPM1-205ENST00000357980 TTLL7Q6ZT98 887 aa21.4■■□□□ 1.02
TPM1-205ENST00000357980 EP400Q96L91 3159 aa21.39■■□□□ 1.02
TPM1-205ENST00000357980 MYH14Q7Z406 1995 aaKnown RBP21.39■■□□□ 1.01
TPM1-205ENST00000357980 UBTFL1P0CB47 393 aaPredicted RBP21.39■■□□□ 1.01
TPM1-205ENST00000357980 LY75O60449 1722 aa21.38■■□□□ 1.01
TPM1-205ENST00000357980 NBPF7P0C2Y1 421 aaPredicted RBP21.38■■□□□ 1.01
TPM1-205ENST00000357980 ATP6V1AP38606 617 aa21.38■■□□□ 1.01
TPM1-205ENST00000357980 RBM6P78332 1123 aaKnown RBP21.38■■□□□ 1.01
TPM1-205ENST00000357980 NEXNQ0ZGT2 675 aa21.38■■□□□ 1.01
TPM1-205ENST00000357980 ITPK1Q13572 414 aa21.38■■□□□ 1.01
TPM1-205ENST00000357980 UTYO14607 1347 aa21.37■■□□□ 1.01
TPM1-205ENST00000357980 NEURL1BA8MQ27 555 aa21.37■■□□□ 1.01
TPM1-205ENST00000357980 ZBTB1Q9Y2K1 713 aa21.37■■□□□ 1.01
TPM1-205ENST00000357980 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
TPM1-205ENST00000357980 MYD88Q99836 296 aa21.36■■□□□ 1.01
TPM1-205ENST00000357980 PDZRN3Q9UPQ7 1066 aa21.36■■□□□ 1.01
TPM1-205ENST00000357980 GCC1Q96CN9 775 aa21.36■■□□□ 1.01
TPM1-205ENST00000357980 GRM8O00222 908 aa21.34■■□□□ 1.01
TPM1-205ENST00000357980 INTS5Q6P9B9 1019 aaKnown RBP21.34■■□□□ 1.01
TPM1-205ENST00000357980 KRT27Q7Z3Y8 459 aa21.34■■□□□ 1.01
TPM1-205ENST00000357980 IL6STP40189 918 aaPredicted RBP21.34■■□□□ 1.01
TPM1-205ENST00000357980 CRKLP46109 303 aaKnown RBP21.34■■□□□ 1.01
TPM1-205ENST00000357980 GCKRQ14397 625 aa21.34■■□□□ 1.01
TPM1-205ENST00000357980 CCDC87Q9NVE4 849 aa21.34■■□□□ 1.01
TPM1-205ENST00000357980 C9orf78Q9NZ63 289 aaPredicted RBP21.34■■□□□ 1.01
TPM1-205ENST00000357980 ZBTB3Q9H5J0 574 aa21.33■■□□□ 1.01
TPM1-205ENST00000357980 DCTPP1Q9H773 170 aa21.33■■□□□ 1.01
TPM1-205ENST00000357980 ANKRD36CQ5JPF3 1778 aa21.32■■□□□ 1
TPM1-205ENST00000357980 ATP8B2P98198 1209 aa21.32■■□□□ 1
TPM1-205ENST00000357980 NUCB1Q02818 461 aa21.32■■□□□ 1
TPM1-205ENST00000357980 ZNF330Q9Y3S2 320 aaPredicted RBP21.32■■□□□ 1
TPM1-205ENST00000357980 TAF1LQ8IZX4 1826 aa21.32■■□□□ 1
TPM1-205ENST00000357980 HMMRO75330 724 aa21.32■■□□□ 1
TPM1-205ENST00000357980 BCL11BQ9C0K0 894 aaPredicted RBP21.32■■□□□ 1
TPM1-205ENST00000357980 NUP98P52948 1817 aa21.31■■□□□ 1
TPM1-205ENST00000357980 PNMA6EA0A0J9YXQ4 647 aa21.31■■□□□ 1
TPM1-205ENST00000357980 EIF5P55010 431 aaKnown RBP21.31■■□□□ 1
TPM1-205ENST00000357980 KIF6Q6ZMV9 814 aa21.31■■□□□ 1
TPM1-205ENST00000357980 FAM196AQ6ZSG2 479 aa21.31■■□□□ 1
TPM1-205ENST00000357980 MAP3K15Q6ZN16 1313 aa21.3■■□□□ 1
TPM1-205ENST00000357980 ATP5J2-PTCD1G3V325 749 aa21.3■■□□□ 1
TPM1-205ENST00000357980 RGS3P49796 1198 aa21.3■■□□□ 1
TPM1-205ENST00000357980 LINC00116Q8NCU8 138 aa21.29■■□□□ 1
TPM1-205ENST00000357980 RGS17Q9UGC6 210 aaPredicted RBP21.29■■□□□ 1
TPM1-205ENST00000357980 HDAC5Q9UQL6 1122 aa21.29■■□□□ 1
TPM1-205ENST00000357980 MTX1Q13505 466 aa21.29■■□□□ 1
TPM1-205ENST00000357980 KAZALD1Q96I82 304 aa21.29■■□□□ 1
TPM1-205ENST00000357980 COL15A1P39059 1388 aa21.28■■□□□ 1
TPM1-205ENST00000357980 SSH3Q8TE77 659 aa21.28■■□□□ 1
TPM1-205ENST00000357980 TCIRG1Q13488 830 aa21.27■■□□□ 1
TPM1-205ENST00000357980 POLA2Q14181 598 aa21.27■■□□□ 1
TPM1-205ENST00000357980 CHD1LQ86WJ1 897 aa21.27■■□□□ 1
TPM1-205ENST00000357980 SUCLG2Q96I99 432 aa21.27■■□□□ 1
TPM1-205ENST00000357980 ISCA1Q9BUE6 129 aa21.27■■□□□ 1
TPM1-205ENST00000357980 CNTNAP4Q9C0A0 1308 aa21.27■■□□□ 1
TPM1-205ENST00000357980 PDE4AP27815 886 aa21.27■□□□□ 0.99
TPM1-205ENST00000357980 RXRBP28702 533 aa21.27■□□□□ 0.99
TPM1-205ENST00000357980 GIGYF2Q6Y7W6 1299 aaKnown RBP21.27■□□□□ 0.99
TPM1-205ENST00000357980 PPP1R42Q7Z4L9 355 aa21.27■□□□□ 0.99
TPM1-205ENST00000357980 CCDC191Q8NCU4 936 aa21.27■□□□□ 0.99
TPM1-205ENST00000357980 BCORQ6W2J9 1755 aa21.26■□□□□ 0.99
TPM1-205ENST00000357980 ERVV-1B6SEH8 477 aa21.26■□□□□ 0.99
TPM1-205ENST00000357980 CASP7P55210 303 aa21.26■□□□□ 0.99
TPM1-205ENST00000357980 KCNQ4P56696 695 aa21.26■□□□□ 0.99
TPM1-205ENST00000357980 TRIM28Q13263 835 aaKnown RBP21.26■□□□□ 0.99
TPM1-205ENST00000357980 TSHZ2Q9NRE2 1034 aa21.26■□□□□ 0.99
TPM1-205ENST00000357980 CWC25Q9NXE8 425 aaPredicted RBP21.26■□□□□ 0.99
TPM1-205ENST00000357980 ANKRD45Q5TZF3 282 aa21.25■□□□□ 0.99
TPM1-205ENST00000357980 DZIP3Q86Y13 1208 aaKnown RBP21.25■□□□□ 0.99
TPM1-205ENST00000357980 LNPKQ9C0E8 428 aa21.25■□□□□ 0.99
TPM1-205ENST00000357980 A0A087WZG4 1122 aa21.25■□□□□ 0.99
TPM1-205ENST00000357980 HLFQ16534 295 aa21.25■□□□□ 0.99
TPM1-205ENST00000357980 CCNL1Q9UK58 526 aaPredicted RBP21.25■□□□□ 0.99
TPM1-205ENST00000357980 H7C1W4 665 aa21.24■□□□□ 0.99
TPM1-205ENST00000357980 SRGAP3O43295 1099 aa21.24■□□□□ 0.99
TPM1-205ENST00000357980 UBE3BQ7Z3V4 1068 aa21.24■□□□□ 0.99
TPM1-205ENST00000357980 BICC1Q9H694 974 aaKnown RBP21.24■□□□□ 0.99
TPM1-205ENST00000357980 C4BP0C0L5 1744 aa21.23■□□□□ 0.99
TPM1-205ENST00000357980 RC3H1Q5TC82 1133 aaKnown RBP21.23■□□□□ 0.99
TPM1-205ENST00000357980 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
TPM1-205ENST00000357980 TBC1D2BQ9UPU7 963 aa21.23■□□□□ 0.99
TPM1-205ENST00000357980 ARXQ96QS3 562 aa21.22■□□□□ 0.99
TPM1-205ENST00000357980 HSP90AB3PQ58FF7 597 aa21.22■□□□□ 0.99
TPM1-205ENST00000357980 POTEAQ6S8J7 498 aa21.22■□□□□ 0.99
TPM1-205ENST00000357980 TRIM37O94972 964 aa21.21■□□□□ 0.99
TPM1-205ENST00000357980 EPHA10Q5JZY3 1008 aa21.21■□□□□ 0.99
TPM1-205ENST00000357980 JARID2Q92833 1246 aaPredicted RBP21.21■□□□□ 0.99
TPM1-205ENST00000357980 EXOC6BQ9Y2D4 811 aa21.21■□□□□ 0.99
TPM1-205ENST00000357980 SCN7AQ01118 1682 aa21.21■□□□□ 0.99
TPM1-205ENST00000357980 CAMTA2O94983 1202 aa21.2■□□□□ 0.98
TPM1-205ENST00000357980 RABL6Q3YEC7 729 aaPredicted RBP21.2■□□□□ 0.98
TPM1-205ENST00000357980 NLRP10Q86W26 655 aa21.18■□□□□ 0.98
TPM1-205ENST00000357980 ZNF34Q8IZ26 560 aa21.18■□□□□ 0.98
TPM1-205ENST00000357980 LRRC4BQ9NT99 713 aa21.18■□□□□ 0.98
TPM1-205ENST00000357980 NOP58Q9Y2X3 529 aaKnown RBP21.18■□□□□ 0.98
TPM1-205ENST00000357980 RPS6KA4O75676 772 aa21.17■□□□□ 0.98
TPM1-205ENST00000357980 C4AP0C0L4 1744 aa21.17■□□□□ 0.98
TPM1-205ENST00000357980 TNS1Q9HBL0 1735 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms