RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 TCHHQ07283 1943 aa21.24■□□□□ 0.99
RTN4-204ENST00000357732 LMO7Q8WWI1 1683 aa21.23■□□□□ 0.99
RTN4-204ENST00000357732 PIBF1Q8WXW3 757 aa21.23■□□□□ 0.99
RTN4-204ENST00000357732 GDPD2Q9HCC8 539 aa21.23■□□□□ 0.99
RTN4-204ENST00000357732 PRIMPOLQ96LW4 560 aa21.23■□□□□ 0.99
RTN4-204ENST00000357732 DIAPH3Q9NSV4 1193 aa21.23■□□□□ 0.99
RTN4-204ENST00000357732 HYPKQ9NX55 129 aa21.23■□□□□ 0.99
RTN4-204ENST00000357732 VSIG10Q8N0Z9 540 aa21.22■□□□□ 0.99
RTN4-204ENST00000357732 CLASRPQ8N2M8 674 aaKnown RBP21.22■□□□□ 0.99
RTN4-204ENST00000357732 CNPY2Q9Y2B0 182 aa21.22■□□□□ 0.99
RTN4-204ENST00000357732 OVOS2A0A0G2JMS6 1433 aa21.22■□□□□ 0.99
RTN4-204ENST00000357732 PHRF1Q9P1Y6 1649 aaKnown RBP21.22■□□□□ 0.99
RTN4-204ENST00000357732 ALDH1L1O75891 902 aa21.22■□□□□ 0.99
RTN4-204ENST00000357732 HMGN5P82970 282 aaKnown RBP21.22■□□□□ 0.99
RTN4-204ENST00000357732 RASEFQ8IZ41 740 aa21.22■□□□□ 0.99
RTN4-204ENST00000357732 HIP1O00291 1037 aa21.21■□□□□ 0.99
RTN4-204ENST00000357732 TPM3P06753 285 aa21.21■□□□□ 0.99
RTN4-204ENST00000357732 NBPF7P0C2Y1 421 aaPredicted RBP21.21■□□□□ 0.99
RTN4-204ENST00000357732 ZSWIM6Q9HCJ5 1215 aa21.21■□□□□ 0.99
RTN4-204ENST00000357732 LTN1O94822 1766 aa21.21■□□□□ 0.99
RTN4-204ENST00000357732 NCAPD2Q15021 1401 aa21.2■□□□□ 0.98
RTN4-204ENST00000357732 CASTP20810 708 aaKnown RBP21.2■□□□□ 0.98
RTN4-204ENST00000357732 CWC27Q6UX04 472 aaKnown RBP21.2■□□□□ 0.98
RTN4-204ENST00000357732 ECHDC1Q9NTX5 307 aa21.2■□□□□ 0.98
RTN4-204ENST00000357732 CYP46A1Q9Y6A2 500 aa21.19■□□□□ 0.98
RTN4-204ENST00000357732 PI4KAP2A4QPH2 592 aa21.19■□□□□ 0.98
RTN4-204ENST00000357732 EIF2S2P20042 333 aaKnown RBP21.19■□□□□ 0.98
RTN4-204ENST00000357732 PI4KAP1Q8N8J0 262 aa21.19■□□□□ 0.98
RTN4-204ENST00000357732 EVI5LQ96CN4 794 aa21.19■□□□□ 0.98
RTN4-204ENST00000357732 FUCA2Q9BTY2 467 aa21.19■□□□□ 0.98
RTN4-204ENST00000357732 KDM4AO75164 1064 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 MAP4K4O95819 1239 aaPredicted RBP21.18■□□□□ 0.98
RTN4-204ENST00000357732 IP6K1Q92551 441 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 PDRG1Q9NUG6 133 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 CHPF2Q9P2E5 772 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 CCDC171Q6TFL3 1326 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 ZKSCAN1P17029 563 aaPredicted RBP21.18■□□□□ 0.98
RTN4-204ENST00000357732 LGR6Q9HBX8 967 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 SNRKQ9NRH2 765 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 DBF4Q9UBU7 674 aaPredicted RBP21.18■□□□□ 0.98
RTN4-204ENST00000357732 USP25Q9UHP3 1055 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 ADCY9O60503 1353 aa21.18■□□□□ 0.98
RTN4-204ENST00000357732 ADCY5O95622 1261 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 NBPF6Q5VWK0 638 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 MYRIPQ8NFW9 859 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 NBPF4Q96M43 638 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 MTMR6Q9Y217 621 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 OS9Q13438 667 aaPredicted RBP21.17■□□□□ 0.98
RTN4-204ENST00000357732 FOXD4L6Q3SYB3 417 aaPredicted RBP21.17■□□□□ 0.98
RTN4-204ENST00000357732 FOXD4L3Q6VB84 417 aaPredicted RBP21.17■□□□□ 0.98
RTN4-204ENST00000357732 SPTLC3Q9NUV7 552 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 FAM13BQ9NYF5 915 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 PHF8Q9UPP1 1060 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 NFAT5O94916 1531 aa21.17■□□□□ 0.98
RTN4-204ENST00000357732 FER1L4A9Z1Z3 1794 aa21.16■□□□□ 0.98
RTN4-204ENST00000357732 GJB2P29033 226 aa21.16■□□□□ 0.98
RTN4-204ENST00000357732 GTF2F1P35269 517 aaKnown RBP eCLIP21.16■□□□□ 0.98
RTN4-204ENST00000357732 NECTIN1Q15223 517 aa21.16■□□□□ 0.98
RTN4-204ENST00000357732 AKAP4Q5JQC9 854 aa21.16■□□□□ 0.98
RTN4-204ENST00000357732 RBM33Q96EV2 1170 aaKnown RBP21.16■□□□□ 0.98
RTN4-204ENST00000357732 SPG7Q9UQ90 795 aa21.16■□□□□ 0.98
RTN4-204ENST00000357732 LMTK3Q96Q04 1460 aa21.16■□□□□ 0.98
RTN4-204ENST00000357732 ELP1O95163 1332 aa21.15■□□□□ 0.98
RTN4-204ENST00000357732 HCLS1P14317 486 aaPredicted RBP21.15■□□□□ 0.98
RTN4-204ENST00000357732 PDCP20941 246 aa21.15■□□□□ 0.98
RTN4-204ENST00000357732 ALDH8A1Q9H2A2 487 aaPredicted RBP21.15■□□□□ 0.98
RTN4-204ENST00000357732 ZBTB7CA1YPR0 619 aa21.15■□□□□ 0.98
RTN4-204ENST00000357732 KCNQ3O43525 872 aa21.15■□□□□ 0.98
RTN4-204ENST00000357732 PSMA5P28066 241 aa21.15■□□□□ 0.98
RTN4-204ENST00000357732 NOLC1Q14978 699 aaKnown RBP eCLIP21.15■□□□□ 0.988e-8■□□□□ 10
RTN4-204ENST00000357732 JAKMIP1Q96N16 626 aaKnown RBP21.15■□□□□ 0.98
RTN4-204ENST00000357732 ZMYND15Q9H091 742 aa21.15■□□□□ 0.98
RTN4-204ENST00000357732 FIBPO43427 364 aa21.14■□□□□ 0.97
RTN4-204ENST00000357732 IFIT2P09913 472 aaKnown RBP21.14■□□□□ 0.97
RTN4-204ENST00000357732 RBM10P98175 930 aaKnown RBP21.14■□□□□ 0.97
RTN4-204ENST00000357732 ANKRD1Q15327 319 aa21.14■□□□□ 0.97
RTN4-204ENST00000357732 TEFQ10587 303 aa21.13■□□□□ 0.97
RTN4-204ENST00000357732 ANXA1P04083 346 aa21.12■□□□□ 0.97
RTN4-204ENST00000357732 CCDC192P0DO97 292 aa21.12■□□□□ 0.97
RTN4-204ENST00000357732 AMOTQ4VCS5 1084 aa21.12■□□□□ 0.97
RTN4-204ENST00000357732 CCDC83Q8IWF9 413 aa21.12■□□□□ 0.97
RTN4-204ENST00000357732 GOLGA6L6A8MZA4 724 aa21.12■□□□□ 0.97
RTN4-204ENST00000357732 PRPF40BQ6NWY9 871 aaKnown RBP21.12■□□□□ 0.97
RTN4-204ENST00000357732 MAP4K1Q92918 833 aa21.12■□□□□ 0.97
RTN4-204ENST00000357732 UTYO14607 1347 aa21.12■□□□□ 0.97
RTN4-204ENST00000357732 HEG1Q9ULI3 1381 aa21.12■□□□□ 0.97
RTN4-204ENST00000357732 BTBD11A6QL63 1104 aa21.11■□□□□ 0.97
RTN4-204ENST00000357732 LARGE1O95461 756 aa21.11■□□□□ 0.97
RTN4-204ENST00000357732 PTH1RQ03431 593 aa21.11■□□□□ 0.97
RTN4-204ENST00000357732 DNTTIP2Q5QJE6 756 aaKnown RBP21.11■□□□□ 0.97
RTN4-204ENST00000357732 KSR2Q6VAB6 950 aa21.11■□□□□ 0.97
RTN4-204ENST00000357732 KCNH5Q8NCM2 988 aa21.11■□□□□ 0.97
RTN4-204ENST00000357732 KRT85P78386 507 aa21.11■□□□□ 0.97
RTN4-204ENST00000357732 DNM1Q05193 864 aaKnown RBP21.11■□□□□ 0.97
RTN4-204ENST00000357732 PLEKHO1Q53GL0 409 aaPredicted RBP21.11■□□□□ 0.97
RTN4-204ENST00000357732 RNF20Q5VTR2 975 aa21.11■□□□□ 0.97
RTN4-204ENST00000357732 LRRC59Q96AG4 307 aaKnown RBP21.11■□□□□ 0.97
RTN4-204ENST00000357732 C9orf78Q9NZ63 289 aaPredicted RBP21.11■□□□□ 0.97
RTN4-204ENST00000357732 ADCK5Q3MIX3 580 aa21.09■□□□□ 0.97
RTN4-204ENST00000357732 ME3Q16798 604 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms