RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 PPP2R1AP30153 589 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 FERMT1Q9BQL6 677 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 EHMT1Q9H9B1 1298 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 CALML4Q96GE6 196 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 ACTN2P35609 894 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 KRT13P13646 458 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 ZNF213O14771 459 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 KRT32Q14532 448 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 RAB34Q9BZG1 259 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 ANO10Q9NW15 660 aa12.13□□□□□ -0.47
FXR1-202ENST00000357559 IQCGQ9H095 443 aaKnown RBP12.12□□□□□ -0.47
FXR1-202ENST00000357559 ZNF652Q9Y2D9 606 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 ZNF622Q969S3 477 aaKnown RBP eCLIP12.12□□□□□ -0.477e-7■□□□□ 9.9
FXR1-202ENST00000357559 MRVI1Q9Y6F6 885 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 CETN1Q12798 172 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 SPECC1LQ69YQ0 1117 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 CATIPQ7Z7H3 387 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 ZNF644Q9H582 1327 aaPredicted RBP12.12□□□□□ -0.47
FXR1-202ENST00000357559 HSF2BPO75031 334 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 HAND2P61296 217 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 MCM10Q7L590 875 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 ZSCAN31Q96LW9 406 aaPredicted RBP12.12□□□□□ -0.47
FXR1-202ENST00000357559 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 F8W031 263 aaPredicted RBP12.12□□□□□ -0.47
FXR1-202ENST00000357559 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 FLIIQ13045 1269 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 GOLGA8AA7E2F4 631 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 PHACTR2O75167 634 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 CEP112Q8N8E3 955 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 CCDC7Q96M83 1385 aa12.12□□□□□ -0.47
FXR1-202ENST00000357559 A0A087WZG4 1122 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 PTGS1P23219 599 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 MAP7D1Q3KQU3 841 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 CCDC50Q8IVM0 306 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 FSIP1Q8NA03 581 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 SREK1Q8WXA9 508 aaKnown RBP12.11□□□□□ -0.47
FXR1-202ENST00000357559 RAPGEF2Q9Y4G8 1499 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 CCDC174Q6PII3 467 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 ATF7IPQ6VMQ6 1270 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 NAA15Q9BXJ9 866 aaKnown RBP12.11□□□□□ -0.47
FXR1-202ENST00000357559 HYPKQ9NX55 129 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 CCDC183Q5T5S1 534 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 SLC12A5Q9H2X9 1139 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
FXR1-202ENST00000357559 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
FXR1-202ENST00000357559 NAA25Q14CX7 972 aa12.11□□□□□ -0.47
FXR1-202ENST00000357559 ESPNB1AK53 854 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 PPARDQ03181 441 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 SELENOSQ9BQE4 189 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 UTP14AQ9BVJ6 771 aaKnown RBP12.1□□□□□ -0.47
FXR1-202ENST00000357559 NACADO15069 1562 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 MNAT1P51948 309 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 KIAA0753Q2KHM9 967 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 SMC1BQ8NDV3 1235 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
FXR1-202ENST00000357559 USP25Q9UHP3 1055 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 MVPQ14764 893 aaKnown RBP12.1□□□□□ -0.47
FXR1-202ENST00000357559 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 THUMPD2Q9BTF0 503 aaKnown RBP12.1□□□□□ -0.47
FXR1-202ENST00000357559 FAM160A1Q05DH4 1040 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 KIF4AO95239 1232 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 AFMP43652 599 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 TBC1D5Q92609 795 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 ZBTB21Q9ULJ3 1066 aa12.1□□□□□ -0.47
FXR1-202ENST00000357559 SKAP1Q86WV1 359 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 AKAP2Q9Y2D5 859 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 PTPRGP23470 1445 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 SLC5A1P13866 664 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 MAP3K12Q12852 859 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 CCDC65Q8IXS2 484 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 TMEM57Q8N5G2 664 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 MICU3Q86XE3 530 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 CCDC12Q8WUD4 166 aaPredicted RBP12.09□□□□□ -0.47
FXR1-202ENST00000357559 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
FXR1-202ENST00000357559 TRMT112Q9UI30 125 aaKnown RBP12.09□□□□□ -0.47
FXR1-202ENST00000357559 IFIT5Q13325 482 aaKnown RBP12.09□□□□□ -0.47
FXR1-202ENST00000357559 EXOC1Q9NV70 894 aa12.09□□□□□ -0.47
FXR1-202ENST00000357559 ZBTB16Q05516 673 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 SLC26A6Q9BXS9 759 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 TSPY2A6NKD2 308 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 PFDN4Q9NQP4 134 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 TCP11L1Q9NUJ3 509 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 ERCC5P28715 1186 aaPredicted RBP12.08□□□□□ -0.48
FXR1-202ENST00000357559 SATB1Q01826 763 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 DNAJC21Q5F1R6 531 aaKnown RBP12.08□□□□□ -0.48
FXR1-202ENST00000357559 TMEM67Q5HYA8 995 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 CCDC155Q8N6L0 562 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 EPSTI1Q96J88 318 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 KAT14Q9H8E8 782 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
FXR1-202ENST00000357559 MSL1Q68DK7 614 aa12.08□□□□□ -0.48
FXR1-202ENST00000357559 ERCC3P19447 782 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 SNW1Q13573 536 aaKnown RBP12.07□□□□□ -0.48
FXR1-202ENST00000357559 GEN1Q17RS7 908 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 TSHZ3Q63HK5 1081 aa12.07□□□□□ -0.48
FXR1-202ENST00000357559 PNISRQ8TF01 805 aaKnown RBP12.07□□□□□ -0.48
FXR1-202ENST00000357559 CLGNO14967 610 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms