RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 DACT1Q9NYF0 836 aa18.14■□□□□ 0.49
TRAPPC11-202ENST00000357207 ANO6Q4KMQ2 910 aa18.13■□□□□ 0.49
TRAPPC11-202ENST00000357207 HYPKQ9NX55 129 aa18.13■□□□□ 0.49
TRAPPC11-202ENST00000357207 SKILP12757 684 aa18.13■□□□□ 0.49
TRAPPC11-202ENST00000357207 DNM1Q05193 864 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-202ENST00000357207 AMOTQ4VCS5 1084 aa18.13■□□□□ 0.49
TRAPPC11-202ENST00000357207 INTS4Q96HW7 963 aaKnown RBP18.13■□□□□ 0.49
TRAPPC11-202ENST00000357207 PIK3R4Q99570 1358 aa18.13■□□□□ 0.49
TRAPPC11-202ENST00000357207 GTF2F1P35269 517 aaKnown RBP eCLIP18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 CCDC196A0A1B0GTZ2 297 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 GOLGA8BA8MQT2 603 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 SAMD1Q6SPF0 538 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 KRT222Q8N1A0 295 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 TRERF1Q96PN7 1200 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 USP26Q9BXU7 913 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 MAP9Q49MG5 647 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 SOGA3Q5TF21 947 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 MPRIPQ6WCQ1 1025 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 TSPYL6Q8N831 410 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 ZNF213O14771 459 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 METTL24Q5JXM2 366 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 TOM1L2Q6ZVM7 507 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 LRP2BPQ9P2M1 347 aa18.12■□□□□ 0.49
TRAPPC11-202ENST00000357207 IKQ13123 557 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 TCEANC2Q96MN5 208 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 ORC3Q9UBD5 711 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 ADGRL1O94910 1474 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 GOLGA6L9A6NEM1 432 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 CCDC150Q8NCX0 1101 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 CPLX3Q8WVH0 158 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 BRF1Q92994 677 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 ZHX3Q9H4I2 956 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 STRN4Q9NRL3 753 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 USP16Q9Y5T5 823 aa18.11■□□□□ 0.49
TRAPPC11-202ENST00000357207 ZC3H6P61129 1189 aaKnown RBP18.1■□□□□ 0.49
TRAPPC11-202ENST00000357207 CEP85Q6P2H3 762 aa18.1■□□□□ 0.49
TRAPPC11-202ENST00000357207 LAMC3Q9Y6N6 1575 aa18.1■□□□□ 0.49
TRAPPC11-202ENST00000357207 BMP2KQ9NSY1 1161 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC11-202ENST00000357207 A0A087WZG4 1122 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 CCDC82Q8N4S0 544 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 NAPBQ9H115 298 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 RBSNQ9H1K0 784 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 MAP3K2Q9Y2U5 619 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 RBM8AQ9Y5S9 174 aaKnown RBP18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 ARHGEF12Q9NZN5 1544 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 POLR3DP05423 398 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 RAI14Q9P0K7 980 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 GNG11P61952 73 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 SYCP1Q15431 976 aa18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.09■□□□□ 0.49
TRAPPC11-202ENST00000357207 ZBTB7BO15156 539 aaPredicted RBP18.08■□□□□ 0.49
TRAPPC11-202ENST00000357207 HSP90AB3PQ58FF7 597 aa18.08■□□□□ 0.49
TRAPPC11-202ENST00000357207 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.49
TRAPPC11-202ENST00000357207 ZNF397Q8NF99 534 aaPredicted RBP18.08■□□□□ 0.49
TRAPPC11-202ENST00000357207 DNAJC25Q9H1X3 360 aa18.08■□□□□ 0.48
TRAPPC11-202ENST00000357207 NPHP3Q7Z494 1330 aa18.08■□□□□ 0.48
TRAPPC11-202ENST00000357207 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
TRAPPC11-202ENST00000357207 PPFIA3O75145 1194 aa18.08■□□□□ 0.48
TRAPPC11-202ENST00000357207 SSBP05455 408 aaKnown RBP eCLIP18.08■□□□□ 0.48
TRAPPC11-202ENST00000357207 TYRO3Q06418 890 aa18.08■□□□□ 0.48
TRAPPC11-202ENST00000357207 SPA17Q15506 151 aa18.08■□□□□ 0.48
TRAPPC11-202ENST00000357207 PIBF1Q8WXW3 757 aa18.08■□□□□ 0.48
TRAPPC11-202ENST00000357207 GOLIM4O00461 696 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 MCM3P25205 808 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 ISM2Q6H9L7 571 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 POLKQ9UBT6 870 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 CCDC102BQ68D86 513 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 PUS7Q96PZ0 661 aaKnown RBP18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 PRM3Q9NNZ6 103 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 ABCF2Q9UG63 623 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 ANXA1P04083 346 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 TAF4BQ92750 862 aa18.07■□□□□ 0.48
TRAPPC11-202ENST00000357207 GOLGA6L7A0A1B0GV03 622 aa18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 SHTN1A0MZ66 631 aa18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 CCDC94Q9BW85 323 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 TMX1Q9H3N1 280 aa18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 DMRT2Q9Y5R5 561 aa18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 SLC12A7Q9Y666 1083 aa18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 POTEB2H3BUK9 544 aa18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 COL17A1Q9UMD9 1497 aaPredicted RBP18.06■□□□□ 0.48
TRAPPC11-202ENST00000357207 IARSP41252 1262 aaKnown RBP18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 AK2P54819 239 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 NPC1L1Q9UHC9 1359 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 GOLGA8AA7E2F4 631 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 INSRP06213 1382 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 ZMYM4Q5VZL5 1548 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 MINDY4BA8MYZ0 360 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 IFIT3O14879 490 aaKnown RBP18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 PHAXQ9H814 394 aaKnown RBP18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 UHRF1BP1Q6BDS2 1440 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 CHMLP26374 656 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 ZNF445P59923 1031 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 NUP88Q99567 741 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 DNAI1Q9UI46 699 aa18.05■□□□□ 0.48
TRAPPC11-202ENST00000357207 SLU7O95391 586 aaKnown RBP18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 UBASH3AP57075 661 aa18.04■□□□□ 0.48
TRAPPC11-202ENST00000357207 PHACTR3Q96KR7 559 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms