RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 STX6O43752 255 aa10.19□□□□□ -0.78
GM2A-201ENST00000357164 DIAPH1O60610 1272 aaKnown RBP10.19□□□□□ -0.78
GM2A-201ENST00000357164 TNNT1P13805 278 aa10.19□□□□□ -0.78
GM2A-201ENST00000357164 GNAI1P63096 354 aa10.19□□□□□ -0.78
GM2A-201ENST00000357164 TWISTNBQ3B726 338 aaPredicted RBP10.19□□□□□ -0.78
GM2A-201ENST00000357164 CCDC186Q7Z3E2 898 aa10.19□□□□□ -0.78
GM2A-201ENST00000357164 SIRT1Q96EB6 747 aa10.19□□□□□ -0.78
GM2A-201ENST00000357164 SNX14Q9Y5W7 946 aa10.19□□□□□ -0.78
GM2A-201ENST00000357164 SOS1Q07889 1333 aaPredicted RBP10.19□□□□□ -0.78
GM2A-201ENST00000357164 NOL8Q76FK4 1167 aaKnown RBP10.19□□□□□ -0.78
GM2A-201ENST00000357164 MRFAP1L1Q96HT8 127 aa10.19□□□□□ -0.78
GM2A-201ENST00000357164 NPHP4O75161 1426 aaPredicted RBP10.19□□□□□ -0.78
GM2A-201ENST00000357164 PARP4Q9UKK3 1724 aaKnown RBP10.19□□□□□ -0.78
GM2A-201ENST00000357164 PLEKHG2Q9H7P9 1386 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 TTC6Q86TZ1 520 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 PI4K2BQ8TCG2 481 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 POGZQ7Z3K3 1410 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 DIP2CQ9Y2E4 1556 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 SIPA1L3O60292 1781 aaPredicted RBP10.18□□□□□ -0.78
GM2A-201ENST00000357164 GIGYF1O75420 1035 aaPredicted RBP10.18□□□□□ -0.78
GM2A-201ENST00000357164 MEIS3Q99687 375 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 TAOK2Q9UL54 1235 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 TRAK1Q9UPV9 953 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 CHL1O00533 1208 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 PNMA6AP0CW24 399 aaPredicted RBP10.18□□□□□ -0.78
GM2A-201ENST00000357164 TYRO3Q06418 890 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 ALDH8A1Q9H2A2 487 aaPredicted RBP10.18□□□□□ -0.78
GM2A-201ENST00000357164 PSD3Q9NYI0 1048 aa10.18□□□□□ -0.78
GM2A-201ENST00000357164 RPS6KA5O75582 802 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 CEP135Q66GS9 1140 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 LUZP1Q86V48 1076 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 RASEFQ8IZ41 740 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 C16orf45Q96MC5 204 aaPredicted RBP10.17□□□□□ -0.78
GM2A-201ENST00000357164 THUMPD2Q9BTF0 503 aaKnown RBP10.17□□□□□ -0.78
GM2A-201ENST00000357164 RNF216Q9NWF9 866 aaPredicted RBP10.17□□□□□ -0.78
GM2A-201ENST00000357164 LCMT1Q9UIC8 334 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 EXOC6BQ9Y2D4 811 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 C4AP0C0L4 1744 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 C4BP0C0L5 1744 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 LIG1P18858 919 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 PRKAR2BP31323 418 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 EFCAB2Q5VUJ9 269 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 AFAP1Q8N556 730 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 AGLP35573 1532 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 SASH3O75995 380 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 CLCN6P51797 869 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 SAFB2Q14151 953 aaKnown RBP eCLIP10.17□□□□□ -0.78
GM2A-201ENST00000357164 CCAR2Q8N163 923 aaKnown RBP10.17□□□□□ -0.78
GM2A-201ENST00000357164 PLCD3Q8N3E9 789 aa10.17□□□□□ -0.78
GM2A-201ENST00000357164 ELF2Q15723 593 aa10.16□□□□□ -0.78
GM2A-201ENST00000357164 OSBPL5Q9H0X9 879 aaPredicted RBP10.16□□□□□ -0.78
GM2A-201ENST00000357164 AK2P54819 239 aa10.16□□□□□ -0.78
GM2A-201ENST00000357164 E4F1Q66K89 784 aaPredicted RBP10.16□□□□□ -0.78
GM2A-201ENST00000357164 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
GM2A-201ENST00000357164 ARID5BQ14865 1188 aa10.16□□□□□ -0.78
GM2A-201ENST00000357164 DHX40Q8IX18 779 aaKnown RBP10.16□□□□□ -0.78
GM2A-201ENST00000357164 GGNBP2Q9H3C7 697 aa10.16□□□□□ -0.78
GM2A-201ENST00000357164 ATP8B1O43520 1251 aa10.15□□□□□ -0.78
GM2A-201ENST00000357164 CHAF1AQ13111 956 aaPredicted RBP10.15□□□□□ -0.78
GM2A-201ENST00000357164 COL9A3Q14050 684 aaPredicted RBP10.15□□□□□ -0.78
GM2A-201ENST00000357164 MSL3Q8N5Y2 521 aaKnown RBP10.15□□□□□ -0.78
GM2A-201ENST00000357164 SGSM2O43147 1006 aa10.15□□□□□ -0.78
GM2A-201ENST00000357164 GNAI3P08754 354 aa10.15□□□□□ -0.78
GM2A-201ENST00000357164 TMEM132EQ6IEE7 984 aa10.15□□□□□ -0.78
GM2A-201ENST00000357164 TRIM65Q6PJ69 517 aa10.15□□□□□ -0.78
GM2A-201ENST00000357164 CCDC112Q8NEF3 446 aa10.15□□□□□ -0.78
GM2A-201ENST00000357164 CLSTN2Q9H4D0 955 aa10.15□□□□□ -0.78
GM2A-201ENST00000357164 CABP2Q9NPB3 220 aa10.15□□□□□ -0.78
GM2A-201ENST00000357164 EDC4Q6P2E9 1401 aaKnown RBP10.15□□□□□ -0.78
GM2A-201ENST00000357164 TBC1D8O95759 1140 aa10.15□□□□□ -0.79
GM2A-201ENST00000357164 CCDC192P0DO97 292 aa10.15□□□□□ -0.79
GM2A-201ENST00000357164 ADD1P35611 737 aaKnown RBP10.14□□□□□ -0.79
GM2A-201ENST00000357164 SPC24Q8NBT2 197 aa10.14□□□□□ -0.79
GM2A-201ENST00000357164 TMX1Q9H3N1 280 aa10.14□□□□□ -0.79
GM2A-201ENST00000357164 DHX16O60231 1041 aaKnown RBP10.14□□□□□ -0.79
GM2A-201ENST00000357164 PGBD1Q96JS3 809 aa10.14□□□□□ -0.79
GM2A-201ENST00000357164 ZSWIM6Q9HCJ5 1215 aa10.14□□□□□ -0.79
GM2A-201ENST00000357164 NWD2Q9ULI1 1742 aa10.14□□□□□ -0.79
GM2A-201ENST00000357164 GOLGA6L6A8MZA4 724 aa10.14□□□□□ -0.79
GM2A-201ENST00000357164 CASC1Q6TDU7 716 aa10.14□□□□□ -0.79
GM2A-201ENST00000357164 TM6SF1Q9BZW5 370 aa10.14□□□□□ -0.79
GM2A-201ENST00000357164 TRIM6-TRIM34B2RNG4 842 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 U2SURPO15042 1029 aaKnown RBP10.13□□□□□ -0.79
GM2A-201ENST00000357164 ST5P78524 1137 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 RNF20Q5VTR2 975 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 TRIM34Q9BYJ4 488 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 ADAMTS7Q9UKP4 1686 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 SLC52A1Q9NWF4 448 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 NEMFO60524 1076 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 SMARCE1Q969G3 411 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 LIMCH1Q9UPQ0 1083 aa10.13□□□□□ -0.79
GM2A-201ENST00000357164 COL22A1Q8NFW1 1626 aaPredicted RBP10.13□□□□□ -0.79
GM2A-201ENST00000357164 ELL2O00472 640 aaPredicted RBP10.12□□□□□ -0.79
GM2A-201ENST00000357164 SLU7O95391 586 aaKnown RBP10.12□□□□□ -0.79
GM2A-201ENST00000357164 CPP00450 1065 aa10.12□□□□□ -0.79
GM2A-201ENST00000357164 SNW1Q13573 536 aaKnown RBP10.12□□□□□ -0.79
GM2A-201ENST00000357164 POLA2Q14181 598 aa10.12□□□□□ -0.79
GM2A-201ENST00000357164 ANO6Q4KMQ2 910 aa10.12□□□□□ -0.79
GM2A-201ENST00000357164 NOL10Q9BSC4 688 aaKnown RBP10.12□□□□□ -0.79
GM2A-201ENST00000357164 HSD3B7Q9H2F3 369 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms