RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 KIAA1524Q8TCG1 905 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 DNAJC2Q99543 621 aaKnown RBP14.76□□□□□ -0.05
BDNF-202ENST00000356660 STRN4Q9NRL3 753 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 PLXNC1O60486 1568 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 THEMISQ8N1K5 641 aaPredicted RBP14.76□□□□□ -0.05
BDNF-202ENST00000356660 RASSF8Q8NHQ8 419 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 RIMS2Q9UQ26 1411 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 WASHC4Q2M389 1173 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 LIG1P18858 919 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 GTF2F1P35269 517 aaKnown RBP eCLIP14.76□□□□□ -0.05
BDNF-202ENST00000356660 ZFP91Q96JP5 570 aaPredicted RBP14.76□□□□□ -0.05
BDNF-202ENST00000356660 FEZ1Q99689 392 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 MYO5CQ9NQX4 1742 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 PAXBP1Q9Y5B6 917 aa14.76□□□□□ -0.05
BDNF-202ENST00000356660 TRPM2O94759 1503 aa14.75□□□□□ -0.05
BDNF-202ENST00000356660 IQGAP3Q86VI3 1631 aa14.75□□□□□ -0.05
BDNF-202ENST00000356660 SMTNL1A8MU46 457 aa14.75□□□□□ -0.05
BDNF-202ENST00000356660 CPLX1O14810 134 aa14.75□□□□□ -0.05
BDNF-202ENST00000356660 ZSCAN20P17040 1043 aaPredicted RBP14.75□□□□□ -0.05
BDNF-202ENST00000356660 BRPF1P55201 1214 aaPredicted RBP14.75□□□□□ -0.05
BDNF-202ENST00000356660 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
BDNF-202ENST00000356660 CBX8Q9HC52 389 aa14.75□□□□□ -0.05
BDNF-202ENST00000356660 DDX19AQ9NUU7 478 aaKnown RBP14.75□□□□□ -0.05
BDNF-202ENST00000356660 LAMC1P11047 1609 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 PLEKHO1Q53GL0 409 aaPredicted RBP14.74□□□□□ -0.05
BDNF-202ENST00000356660 NAT10Q9H0A0 1025 aaKnown RBP14.74□□□□□ -0.05
BDNF-202ENST00000356660 WASLO00401 505 aaPredicted RBP14.74□□□□□ -0.05
BDNF-202ENST00000356660 ZNF710Q8N1W2 664 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 PDILTQ8N807 584 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 LRRC2Q9BYS8 371 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 IQSEC2Q5JU85 1478 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 CHL1O00533 1208 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 HSPA4P34932 840 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 UBXN4Q92575 508 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 CCDC85AQ96PX6 553 aaPredicted RBP14.74□□□□□ -0.05
BDNF-202ENST00000356660 TMX1Q9H3N1 280 aa14.74□□□□□ -0.05
BDNF-202ENST00000356660 BIN1O00499 593 aa14.73□□□□□ -0.05
BDNF-202ENST00000356660 CLTCL1P53675 1640 aa14.73□□□□□ -0.05
BDNF-202ENST00000356660 RUFY3Q7L099 469 aa14.73□□□□□ -0.05
BDNF-202ENST00000356660 CEP57L1Q8IYX8 460 aa14.73□□□□□ -0.05
BDNF-202ENST00000356660 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
BDNF-202ENST00000356660 USP16Q9Y5T5 823 aa14.73□□□□□ -0.05
BDNF-202ENST00000356660 SKIDA1Q1XH10 827 aa14.73□□□□□ -0.05
BDNF-202ENST00000356660 ISM2Q6H9L7 571 aa14.73□□□□□ -0.05
BDNF-202ENST00000356660 GPS2Q13227 327 aa14.72□□□□□ -0.05
BDNF-202ENST00000356660 ANKRD1Q15327 319 aa14.72□□□□□ -0.05
BDNF-202ENST00000356660 GTF3C6Q969F1 213 aa14.72□□□□□ -0.05
BDNF-202ENST00000356660 SGSM2O43147 1006 aa14.72□□□□□ -0.05
BDNF-202ENST00000356660 CFAP45Q9UL16 551 aa14.72□□□□□ -0.05
BDNF-202ENST00000356660 UNC13BO14795 1591 aa14.72□□□□□ -0.05
BDNF-202ENST00000356660 MTHFSDQ2M296 383 aaKnown RBP14.72□□□□□ -0.05
BDNF-202ENST00000356660 CDC37L1Q7L3B6 337 aa14.72□□□□□ -0.05
BDNF-202ENST00000356660 PI4KAP2A4QPH2 592 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 URI1O94763 535 aaPredicted RBP14.71□□□□□ -0.05
BDNF-202ENST00000356660 ZNF853P0CG23 659 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 ELF2Q15723 593 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 TTC6Q86TZ1 520 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 PI4KAP1Q8N8J0 262 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 PA2G4Q9UQ80 394 aaKnown RBP14.71□□□□□ -0.05
BDNF-202ENST00000356660 PREX2Q70Z35 1606 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 ERCC4Q92889 916 aaPredicted RBP14.71□□□□□ -0.05
BDNF-202ENST00000356660 STK38Q15208 465 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 STK11IPQ8N1F8 1099 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 ZNF526Q8TF50 670 aaPredicted RBP14.71□□□□□ -0.05
BDNF-202ENST00000356660 TIGD1Q96MW7 591 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 NOL10Q9BSC4 688 aaKnown RBP14.71□□□□□ -0.05
BDNF-202ENST00000356660 PHAXQ9H814 394 aaKnown RBP14.71□□□□□ -0.05
BDNF-202ENST00000356660 ECHDC1Q9NTX5 307 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 MTMR6Q9Y217 621 aa14.71□□□□□ -0.05
BDNF-202ENST00000356660 CCDC69A6NI79 296 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 PES1O00541 588 aaKnown RBP14.7□□□□□ -0.06
BDNF-202ENST00000356660 LARGE1O95461 756 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 SFPQP23246 707 aaKnown RBP eCLIP14.7□□□□□ -0.06
BDNF-202ENST00000356660 ZNF75DP51815 510 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 CCT2P78371 535 aaKnown RBP14.7□□□□□ -0.06
BDNF-202ENST00000356660 SNW1Q13573 536 aaKnown RBP14.7□□□□□ -0.06
BDNF-202ENST00000356660 RAD50Q92878 1312 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 AMOTL2Q9Y2J4 779 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 PTCH1Q13635 1447 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 ZSCAN25Q6NSZ9 544 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 LARP1Q6PKG0 1096 aaKnown RBP14.7□□□□□ -0.06
BDNF-202ENST00000356660 TMCO3Q6UWJ1 677 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 TMC6Q7Z403 805 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 ZNF215Q9UL58 517 aaPredicted RBP14.7□□□□□ -0.06
BDNF-202ENST00000356660 GNAT3A8MTJ3 354 aa14.7□□□□□ -0.06
BDNF-202ENST00000356660 SOS1Q07889 1333 aaPredicted RBP14.69□□□□□ -0.06
BDNF-202ENST00000356660 A0A087WWV3 80 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 SERPINC1P01008 464 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 ATP2B1P20020 1258 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 SYNE3Q6ZMZ3 975 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 CCAR1Q8IX12 1150 aaKnown RBP14.69□□□□□ -0.06
BDNF-202ENST00000356660 CDC42BPBQ9Y5S2 1711 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 NPHP3Q7Z494 1330 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 ADCK5Q3MIX3 580 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 TTLL5Q6EMB2 1281 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 ZNF397Q8NF99 534 aaPredicted RBP14.69□□□□□ -0.06
BDNF-202ENST00000356660 CALCOCO1Q9P1Z2 691 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 BTBD11A6QL63 1104 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 ME3Q16798 604 aa14.69□□□□□ -0.06
BDNF-202ENST00000356660 MPRIPQ6WCQ1 1025 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms