RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 FOXD4L4Q8WXT5 416 aaPredicted RBP17.13■□□□□ 0.33
LSS-201ENST00000356396 ZBTB1Q9Y2K1 713 aa17.13■□□□□ 0.33
LSS-201ENST00000356396 HYPKQ9NX55 129 aa17.13■□□□□ 0.33
LSS-201ENST00000356396 MX1P20591 662 aa17.12■□□□□ 0.33
LSS-201ENST00000356396 LRP10Q7Z4F1 713 aa17.12■□□□□ 0.33
LSS-201ENST00000356396 ROBO1Q9Y6N7 1651 aa17.12■□□□□ 0.33
LSS-201ENST00000356396 CPDO75976 1380 aa17.12■□□□□ 0.33
LSS-201ENST00000356396 FAM208AQ9UK61 1670 aaKnown RBP17.12■□□□□ 0.33
LSS-201ENST00000356396 VIRMAQ69YN4 1812 aaKnown RBP17.11■□□□□ 0.33
LSS-201ENST00000356396 COL9A3Q14050 684 aaPredicted RBP17.11■□□□□ 0.33
LSS-201ENST00000356396 GCKRQ14397 625 aa17.11■□□□□ 0.33
LSS-201ENST00000356396 BMP2KLQ5H9B9 411 aa17.11■□□□□ 0.33
LSS-201ENST00000356396 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
LSS-201ENST00000356396 BOLA2Q9H3K6 86 aa17.11■□□□□ 0.33
LSS-201ENST00000356396 OVOS2A0A0G2JMS6 1433 aa17.11■□□□□ 0.33
LSS-201ENST00000356396 AAMPQ13685 434 aa17.11■□□□□ 0.33
LSS-201ENST00000356396 MARCH10Q8NA82 808 aaPredicted RBP17.11■□□□□ 0.33
LSS-201ENST00000356396 LRRC37A3O60309 1634 aa17.11■□□□□ 0.33
LSS-201ENST00000356396 BICDL1Q6ZP65 573 aa17.1■□□□□ 0.33
LSS-201ENST00000356396 AACSQ86V21 672 aa17.1■□□□□ 0.33
LSS-201ENST00000356396 CPA1P15085 419 aa17.1■□□□□ 0.33
LSS-201ENST00000356396 NEXNQ0ZGT2 675 aa17.1■□□□□ 0.33
LSS-201ENST00000356396 DDB1Q16531 1140 aa17.1■□□□□ 0.33
LSS-201ENST00000356396 PUS3Q9BZE2 481 aaKnown RBP17.1■□□□□ 0.33
LSS-201ENST00000356396 CWC27Q6UX04 472 aaKnown RBP17.1■□□□□ 0.33
LSS-201ENST00000356396 SASH1O94885 1247 aa17.09■□□□□ 0.33
LSS-201ENST00000356396 SLC51AQ86UW1 340 aa17.09■□□□□ 0.33
LSS-201ENST00000356396 ANO2Q9NQ90 1003 aa17.09■□□□□ 0.33
LSS-201ENST00000356396 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
LSS-201ENST00000356396 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
LSS-201ENST00000356396 LINS1Q8NG48 757 aa17.09■□□□□ 0.33
LSS-201ENST00000356396 EAF2Q96CJ1 260 aaPredicted RBP17.09■□□□□ 0.33
LSS-201ENST00000356396 UPF3BQ9BZI7 483 aaKnown RBP17.09■□□□□ 0.33
LSS-201ENST00000356396 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.33
LSS-201ENST00000356396 AEBP2Q6ZN18 517 aaPredicted RBP17.08■□□□□ 0.33
LSS-201ENST00000356396 SSH3Q8TE77 659 aa17.08■□□□□ 0.33
LSS-201ENST00000356396 CHMP4BQ9H444 224 aaKnown RBP17.08■□□□□ 0.33
LSS-201ENST00000356396 PALD1Q9ULE6 856 aa17.08■□□□□ 0.33
LSS-201ENST00000356396 C5P01031 1676 aa17.08■□□□□ 0.32
LSS-201ENST00000356396 TIMM10P62072 90 aa17.08■□□□□ 0.32
LSS-201ENST00000356396 KIF2CQ99661 725 aa17.07■□□□□ 0.32
LSS-201ENST00000356396 METTL22Q9BUU2 404 aaPredicted RBP17.07■□□□□ 0.32
LSS-201ENST00000356396 HEG1Q9ULI3 1381 aa17.07■□□□□ 0.32
LSS-201ENST00000356396 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
LSS-201ENST00000356396 NEUROD6Q96NK8 337 aa17.07■□□□□ 0.32
LSS-201ENST00000356396 CDC45O75419 566 aa17.07■□□□□ 0.32
LSS-201ENST00000356396 HSP90AB3PQ58FF7 597 aa17.07■□□□□ 0.32
LSS-201ENST00000356396 TOM1O60784 492 aa17.06■□□□□ 0.32
LSS-201ENST00000356396 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
LSS-201ENST00000356396 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
LSS-201ENST00000356396 IBTKQ9P2D0 1353 aaPredicted RBP17.06■□□□□ 0.32
LSS-201ENST00000356396 LMO7Q8WWI1 1683 aa17.06■□□□□ 0.32
LSS-201ENST00000356396 TFCP2Q12800 502 aa17.05■□□□□ 0.32
LSS-201ENST00000356396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.326e-12■□□□□ 8.5
LSS-201ENST00000356396 USP54Q70EL1 1684 aa17.05■□□□□ 0.32
LSS-201ENST00000356396 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
LSS-201ENST00000356396 SNRKQ9NRH2 765 aa17.05■□□□□ 0.32
LSS-201ENST00000356396 TAOK2Q9UL54 1235 aa17.05■□□□□ 0.32
LSS-201ENST00000356396 NCOA3Q9Y6Q9 1424 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 NFKBIBQ15653 356 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 DNAJC2Q99543 621 aaKnown RBP17.04■□□□□ 0.32
LSS-201ENST00000356396 HSP90AB1P08238 724 aaKnown RBP17.04■□□□□ 0.32
LSS-201ENST00000356396 HSPA1LP34931 641 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 ATP6V1AP38606 617 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 TCEANC2Q96MN5 208 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 BABAM1Q9NWV8 329 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 KDM3BQ7LBC6 1761 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 PPFIA3O75145 1194 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 HCLS1P14317 486 aaPredicted RBP17.04■□□□□ 0.32
LSS-201ENST00000356396 DDRGK1Q96HY6 314 aa17.04■□□□□ 0.32
LSS-201ENST00000356396 HSP90AA1P07900 732 aaKnown RBP17.03■□□□□ 0.32
LSS-201ENST00000356396 HOXB7P09629 217 aa17.03■□□□□ 0.32
LSS-201ENST00000356396 G3BP1Q13283 466 aaKnown RBP eCLIP17.03■□□□□ 0.32
LSS-201ENST00000356396 IFIT2P09913 472 aaKnown RBP17.02■□□□□ 0.32
LSS-201ENST00000356396 PI16Q6UXB8 463 aa17.02■□□□□ 0.32
LSS-201ENST00000356396 AMIGO3Q86WK7 504 aa17.02■□□□□ 0.32
LSS-201ENST00000356396 ITPK1Q13572 414 aa17.02■□□□□ 0.31
LSS-201ENST00000356396 POLA2Q14181 598 aa17.02■□□□□ 0.31
LSS-201ENST00000356396 FAM227BQ96M60 508 aa17.02■□□□□ 0.31
LSS-201ENST00000356396 GZF1Q9H116 711 aaPredicted RBP17.02■□□□□ 0.31
LSS-201ENST00000356396 MEX3CQ5U5Q3 659 aaKnown RBP17.01■□□□□ 0.31
LSS-201ENST00000356396 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
LSS-201ENST00000356396 DBNDD2Q9BQY9 259 aa17.01■□□□□ 0.31
LSS-201ENST00000356396 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
LSS-201ENST00000356396 PHF14O94880 888 aa17.01■□□□□ 0.31
LSS-201ENST00000356396 PI4K2BQ8TCG2 481 aa17.01■□□□□ 0.31
LSS-201ENST00000356396 CRYBG1Q9Y4K1 1723 aa17■□□□□ 0.31
LSS-201ENST00000356396 PKP1Q13835 747 aa17■□□□□ 0.31
LSS-201ENST00000356396 CCDC129Q6ZRS4 1044 aa17■□□□□ 0.31
LSS-201ENST00000356396 DDX46Q7L014 1031 aaKnown RBP17■□□□□ 0.31
LSS-201ENST00000356396 TAF6LQ9Y6J9 622 aa17■□□□□ 0.31
LSS-201ENST00000356396 SPATA31A1Q5TZJ5 1347 aa17■□□□□ 0.31
LSS-201ENST00000356396 PTPN12Q05209 780 aaKnown RBP17■□□□□ 0.31
LSS-201ENST00000356396 CLASRPQ8N2M8 674 aaKnown RBP17■□□□□ 0.31
LSS-201ENST00000356396 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
LSS-201ENST00000356396 KIF1BPQ96EK5 621 aa16.99■□□□□ 0.31
LSS-201ENST00000356396 SCN11AQ9UI33 1791 aa16.99■□□□□ 0.31
LSS-201ENST00000356396 USP26Q9BXU7 913 aa16.99■□□□□ 0.31
LSS-201ENST00000356396 PCNTO95613 3336 aa16.99■□□□□ 0.31
LSS-201ENST00000356396 CHMLP26374 656 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms