RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CHMP4AQ9BY43 222 aa22.96■■□□□ 1.27
PDLIM7-202ENST00000355841 HLFQ16534 295 aa22.95■■□□□ 1.26
PDLIM7-202ENST00000355841 KIF6Q6ZMV9 814 aa22.95■■□□□ 1.26
PDLIM7-202ENST00000355841 BICDL1Q6ZP65 573 aa22.93■■□□□ 1.26
PDLIM7-202ENST00000355841 SSH1Q8WYL5 1049 aa22.93■■□□□ 1.26
PDLIM7-202ENST00000355841 MAP3K15Q6ZN16 1313 aa22.93■■□□□ 1.26
PDLIM7-202ENST00000355841 SPON1Q9HCB6 807 aa22.93■■□□□ 1.26
PDLIM7-202ENST00000355841 NLGN1Q8N2Q7 840 aa22.92■■□□□ 1.26
PDLIM7-202ENST00000355841 MMP10P09238 476 aa22.91■■□□□ 1.26
PDLIM7-202ENST00000355841 PTGER2P43116 358 aa22.91■■□□□ 1.26
PDLIM7-202ENST00000355841 TBC1D9BQ66K14 1250 aa22.91■■□□□ 1.26
PDLIM7-202ENST00000355841 CT47B1P0C2W7 299 aaPredicted RBP22.9■■□□□ 1.26
PDLIM7-202ENST00000355841 FLIIQ13045 1269 aa22.9■■□□□ 1.26
PDLIM7-202ENST00000355841 NFIXQ14938 502 aa22.9■■□□□ 1.26
PDLIM7-202ENST00000355841 ANKRD13DQ6ZTN6 518 aa22.9■■□□□ 1.26
PDLIM7-202ENST00000355841 MRPL50Q8N5N7 158 aaKnown RBP22.9■■□□□ 1.26
PDLIM7-202ENST00000355841 SGIP1Q9BQI5 828 aa22.9■■□□□ 1.26
PDLIM7-202ENST00000355841 SMC4Q9NTJ3 1288 aa22.9■■□□□ 1.26
PDLIM7-202ENST00000355841 SCN7AQ01118 1682 aa22.89■■□□□ 1.26
PDLIM7-202ENST00000355841 ERVV-1B6SEH8 477 aa22.89■■□□□ 1.25
PDLIM7-202ENST00000355841 RARSP54136 660 aaKnown RBP22.88■■□□□ 1.25
PDLIM7-202ENST00000355841 DDR1Q08345 913 aa22.88■■□□□ 1.25
PDLIM7-202ENST00000355841 PLBD2Q8NHP8 589 aa22.88■■□□□ 1.25
PDLIM7-202ENST00000355841 ZNF428Q96B54 188 aa22.88■■□□□ 1.25
PDLIM7-202ENST00000355841 ZNF652Q9Y2D9 606 aa22.88■■□□□ 1.25
PDLIM7-202ENST00000355841 BCORQ6W2J9 1755 aa22.88■■□□□ 1.25
PDLIM7-202ENST00000355841 TM4SF1P30408 202 aa22.87■■□□□ 1.25
PDLIM7-202ENST00000355841 GPTP24298 496 aa22.87■■□□□ 1.25
PDLIM7-202ENST00000355841 POLD1P28340 1107 aa22.87■■□□□ 1.25
PDLIM7-202ENST00000355841 FKBP5Q13451 457 aaPredicted RBP22.87■■□□□ 1.25
PDLIM7-202ENST00000355841 ALDH1L2Q3SY69 923 aa22.87■■□□□ 1.25
PDLIM7-202ENST00000355841 CLEC4GQ6UXB4 293 aa22.87■■□□□ 1.25
PDLIM7-202ENST00000355841 GIGYF2Q6Y7W6 1299 aaKnown RBP22.87■■□□□ 1.25
PDLIM7-202ENST00000355841 RIC3Q7Z5B4 369 aa22.87■■□□□ 1.25
PDLIM7-202ENST00000355841 PI4KAP2A4QPH2 592 aa22.86■■□□□ 1.25
PDLIM7-202ENST00000355841 PI4KAP1Q8N8J0 262 aa22.86■■□□□ 1.25
PDLIM7-202ENST00000355841 NIP7Q9Y221 180 aaKnown RBP eCLIP22.86■■□□□ 1.25
PDLIM7-202ENST00000355841 BCAR3O75815 825 aa22.85■■□□□ 1.25
PDLIM7-202ENST00000355841 MAP3K2Q9Y2U5 619 aa22.85■■□□□ 1.25
PDLIM7-202ENST00000355841 FAM177BA6PVY3 158 aa22.84■■□□□ 1.25
PDLIM7-202ENST00000355841 POLRMTO00411 1230 aaKnown RBP22.84■■□□□ 1.25
PDLIM7-202ENST00000355841 DDX58O95786 925 aaKnown RBP22.84■■□□□ 1.25
PDLIM7-202ENST00000355841 SETDB2Q96T68 719 aa22.84■■□□□ 1.25
PDLIM7-202ENST00000355841 ADCY9O60503 1353 aa22.84■■□□□ 1.25
PDLIM7-202ENST00000355841 PARP3Q9Y6F1 533 aa22.84■■□□□ 1.25
PDLIM7-202ENST00000355841 F6X3S4 739 aa22.83■■□□□ 1.24
PDLIM7-202ENST00000355841 ATP5J2-PTCD1G3V325 749 aa22.83■■□□□ 1.24
PDLIM7-202ENST00000355841 KSR2Q6VAB6 950 aa22.83■■□□□ 1.24
PDLIM7-202ENST00000355841 UBN2Q6ZU65 1347 aa22.82■■□□□ 1.24
PDLIM7-202ENST00000355841 TCIRG1Q13488 830 aa22.82■■□□□ 1.24
PDLIM7-202ENST00000355841 NUP98P52948 1817 aa22.82■■□□□ 1.24
PDLIM7-202ENST00000355841 ZNF34Q8IZ26 560 aa22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 MYD88Q99836 296 aa22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 COL24A1Q17RW2 1714 aa22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 RGL2O15211 777 aa22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 SERPINB2P05120 415 aa22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 KLHL34Q8N239 644 aa22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 CCDC24Q8N4L8 307 aa22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 PPP1R1BQ9UD71 204 aaPredicted RBP22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 NOB1Q9ULX3 412 aaKnown RBP22.81■■□□□ 1.24
PDLIM7-202ENST00000355841 ATP10DQ9P241 1426 aa22.8■■□□□ 1.24
PDLIM7-202ENST00000355841 CARMIL3Q8ND23 1372 aa22.79■■□□□ 1.24
PDLIM7-202ENST00000355841 METTL22Q9BUU2 404 aaPredicted RBP22.79■■□□□ 1.24
PDLIM7-202ENST00000355841 ARFGEF2Q9Y6D5 1785 aa22.79■■□□□ 1.24
PDLIM7-202ENST00000355841 CACNA1FO60840 1977 aa22.79■■□□□ 1.24
PDLIM7-202ENST00000355841 HSP90AB3PQ58FF7 597 aa22.78■■□□□ 1.24
PDLIM7-202ENST00000355841 SUSD4Q5VX71 490 aa22.78■■□□□ 1.24
PDLIM7-202ENST00000355841 NBPF5PQ86XG9 351 aaPredicted RBP22.78■■□□□ 1.24
PDLIM7-202ENST00000355841 DNAAF4Q8WXU2 420 aa22.78■■□□□ 1.24
PDLIM7-202ENST00000355841 FRAT1Q92837 279 aaPredicted RBP22.77■■□□□ 1.24
PDLIM7-202ENST00000355841 NPHP1O15259 732 aa22.77■■□□□ 1.24
PDLIM7-202ENST00000355841 SLC4A10Q6U841 1118 aa22.77■■□□□ 1.24
PDLIM7-202ENST00000355841 NLRP10Q86W26 655 aa22.77■■□□□ 1.24
PDLIM7-202ENST00000355841 ISCA1Q9BUE6 129 aa22.77■■□□□ 1.24
PDLIM7-202ENST00000355841 RCAN3Q9UKA8 241 aa22.77■■□□□ 1.24
PDLIM7-202ENST00000355841 IGKV5-2P06315 115 aa22.76■■□□□ 1.23
PDLIM7-202ENST00000355841 BRPF1P55201 1214 aaPredicted RBP22.76■■□□□ 1.23
PDLIM7-202ENST00000355841 CWF19L2Q2TBE0 894 aaKnown RBP22.76■■□□□ 1.23
PDLIM7-202ENST00000355841 NUTM1Q86Y26 1132 aa22.76■■□□□ 1.23
PDLIM7-202ENST00000355841 PTPRCP08575 1304 aa22.76■■□□□ 1.23
PDLIM7-202ENST00000355841 PRR5LQ6MZQ0 368 aa22.75■■□□□ 1.23
PDLIM7-202ENST00000355841 LRP5O75197 1615 aa22.75■■□□□ 1.23
PDLIM7-202ENST00000355841 CNBD1Q8NA66 436 aa22.74■■□□□ 1.23
PDLIM7-202ENST00000355841 FHDC1Q9C0D6 1143 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-202ENST00000355841 NEXNQ0ZGT2 675 aa22.74■■□□□ 1.23
PDLIM7-202ENST00000355841 PARP10Q53GL7 1025 aa22.74■■□□□ 1.23
PDLIM7-202ENST00000355841 RTL5Q5HYW3 569 aaPredicted RBP22.74■■□□□ 1.23
PDLIM7-202ENST00000355841 SYNE4Q8N205 404 aa22.74■■□□□ 1.23
PDLIM7-202ENST00000355841 TNNQ9UQP3 1299 aa22.74■■□□□ 1.23
PDLIM7-202ENST00000355841 KIF16BQ96L93 1317 aa22.74■■□□□ 1.23
PDLIM7-202ENST00000355841 NTSR2O95665 410 aa22.73■■□□□ 1.23
PDLIM7-202ENST00000355841 TPTE2Q6XPS3 522 aa22.73■■□□□ 1.23
PDLIM7-202ENST00000355841 JARID2Q92833 1246 aaPredicted RBP22.73■■□□□ 1.23
PDLIM7-202ENST00000355841 ANKRD36CQ5JPF3 1778 aa22.72■■□□□ 1.23
PDLIM7-202ENST00000355841 AFDNP55196 1824 aaKnown RBP22.72■■□□□ 1.23
PDLIM7-202ENST00000355841 GTF2E1P29083 439 aaPredicted RBP22.72■■□□□ 1.23
PDLIM7-202ENST00000355841 ERFEQ4G0M1 354 aa22.72■■□□□ 1.23
PDLIM7-202ENST00000355841 PPP1R42Q7Z4L9 355 aa22.72■■□□□ 1.23
PDLIM7-202ENST00000355841 UTP14AQ9BVJ6 771 aaKnown RBP22.72■■□□□ 1.23
PDLIM7-202ENST00000355841 TRMT112Q9UI30 125 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms