RNA–Protein interactions for RNA: ENST00000355260.7

NUP98-202, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 5,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-202ENST00000355260 NLRP2Q9NX02 1062 aa9.49□□□□□ -0.89
NUP98-202ENST00000355260 ADGRL3Q9HAR2 1447 aa9.49□□□□□ -0.89
NUP98-202ENST00000355260 NEUROD6Q96NK8 337 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 UPF3BQ9BZI7 483 aaKnown RBP9.48□□□□□ -0.89
NUP98-202ENST00000355260 FILIP1Q7Z7B0 1213 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 SRRTQ9BXP5 876 aaKnown RBP9.48□□□□□ -0.89
NUP98-202ENST00000355260 MAGEC2Q9UBF1 373 aaPredicted RBP9.48□□□□□ -0.89
NUP98-202ENST00000355260 CAMSAP1Q5T5Y3 1602 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 OFD1O75665 1012 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 APPP05067 770 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 ESCO1Q5FWF5 840 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 CCDC83Q8IWF9 413 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 ZNF592Q92610 1267 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 ZNHIT6Q9NWK9 470 aaKnown RBP9.48□□□□□ -0.89
NUP98-202ENST00000355260 CEP126Q9P2H0 1117 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 NLRP1Q9C000 1473 aa9.48□□□□□ -0.89
NUP98-202ENST00000355260 CCDC69A6NI79 296 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 XRCC6P12956 609 aaKnown RBP eCLIP9.47□□□□□ -0.89
NUP98-202ENST00000355260 RNF214Q8ND24 703 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 LRRFIP2Q9Y608 721 aaKnown RBP9.47□□□□□ -0.89
NUP98-202ENST00000355260 NUTM2FA1L443 756 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 RHPN1Q8TCX5 695 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 RNF41Q9H4P4 317 aaPredicted RBP9.47□□□□□ -0.89
NUP98-202ENST00000355260 TBX22Q9Y458 520 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 CWC27Q6UX04 472 aaKnown RBP9.47□□□□□ -0.89
NUP98-202ENST00000355260 TRIM35Q9UPQ4 493 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 PPFIBP1Q86W92 1011 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 RUFY1Q96T51 708 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 DNAJC2Q99543 621 aaKnown RBP9.47□□□□□ -0.89
NUP98-202ENST00000355260 PLEKHG1Q9ULL1 1385 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 CHL1O00533 1208 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 JAKMIP3Q5VZ66 844 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 KIF18AQ8NI77 898 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 NECTIN2Q92692 538 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 FMNL2Q96PY5 1086 aa9.47□□□□□ -0.89
NUP98-202ENST00000355260 LLPHQ9BRT6 129 aaKnown RBP9.47□□□□□ -0.89
NUP98-202ENST00000355260 ME1P48163 572 aa9.46□□□□□ -0.89
NUP98-202ENST00000355260 EIF4A2Q14240 407 aaKnown RBP9.46□□□□□ -0.89
NUP98-202ENST00000355260 CCDC178Q5BJE1 867 aa9.46□□□□□ -0.89
NUP98-202ENST00000355260 MCM10Q7L590 875 aa9.46□□□□□ -0.89
NUP98-202ENST00000355260 FAM200AQ8TCP9 573 aa9.46□□□□□ -0.89
NUP98-202ENST00000355260 TM6SF1Q9BZW5 370 aa9.46□□□□□ -0.89
NUP98-202ENST00000355260 WAPLQ7Z5K2 1190 aa9.46□□□□□ -0.89
NUP98-202ENST00000355260 AMOTL2Q9Y2J4 779 aa9.46□□□□□ -0.89
NUP98-202ENST00000355260 TUBBP07437 444 aa9.46□□□□□ -0.9
NUP98-202ENST00000355260 MARCH6O60337 910 aa9.46□□□□□ -0.9
NUP98-202ENST00000355260 F13A1P00488 732 aa9.46□□□□□ -0.9
NUP98-202ENST00000355260 FAM193AP78312 1265 aa9.46□□□□□ -0.9
NUP98-202ENST00000355260 EXOC6BQ9Y2D4 811 aa9.46□□□□□ -0.9
NUP98-202ENST00000355260 KCNG4Q8TDN1 519 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 CEP89Q96ST8 783 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 PLEKHF1Q96S99 279 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 FAM107BQ9H098 131 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 RLBP1P12271 317 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 KSR2Q6VAB6 950 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 VPS37DQ86XT2 251 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 ZNF287Q9HBT7 754 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 ANKARQ7Z5J8 1434 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 SERPINC1P01008 464 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 GJB2P29033 226 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 TUBB2AQ13885 445 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 PRPF40BQ6NWY9 871 aaKnown RBP9.45□□□□□ -0.9
NUP98-202ENST00000355260 TUBB2BQ9BVA1 445 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 GTF2E1P29083 439 aaPredicted RBP9.45□□□□□ -0.9
NUP98-202ENST00000355260 PTPN14Q15678 1187 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 MAP9Q49MG5 647 aa9.45□□□□□ -0.9
NUP98-202ENST00000355260 LEKR1Q6ZMV7 388 aa9.44□□□□□ -0.9
NUP98-202ENST00000355260 STARD3NLO95772 234 aa9.44□□□□□ -0.9
NUP98-202ENST00000355260 UQCRFS1P1P0C7P4 283 aa9.44□□□□□ -0.9
NUP98-202ENST00000355260 SFPQP23246 707 aaKnown RBP eCLIP9.44□□□□□ -0.9
NUP98-202ENST00000355260 AIMP1Q12904 312 aaKnown RBP9.44□□□□□ -0.9
NUP98-202ENST00000355260 PROSER2Q86WR7 435 aaPredicted RBP9.44□□□□□ -0.9
NUP98-202ENST00000355260 VWDEQ8N2E2 1590 aa9.44□□□□□ -0.9
NUP98-202ENST00000355260 ZNF330Q9Y3S2 320 aaPredicted RBP9.44□□□□□ -0.9
NUP98-202ENST00000355260 NPHP3Q7Z494 1330 aa9.44□□□□□ -0.9
NUP98-202ENST00000355260 PLEKHG5O94827 1062 aa9.44□□□□□ -0.9
NUP98-202ENST00000355260 IFNL2Q8IZJ0 200 aa9.44□□□□□ -0.9
NUP98-202ENST00000355260 PPP1R9BQ96SB3 815 aa9.44□□□□□ -0.9
NUP98-202ENST00000355260 NCAPD2Q15021 1401 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 FGFR1OPO95684 399 aaKnown RBP9.43□□□□□ -0.9
NUP98-202ENST00000355260 TMTC2Q8N394 836 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 LINS1Q8NG48 757 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 UBE2Q2Q8WVN8 375 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 PHF23Q9BUL5 403 aaPredicted RBP9.43□□□□□ -0.9
NUP98-202ENST00000355260 RGS12O14924 1447 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 IQSEC2Q5JU85 1478 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 PPP1R42Q7Z4L9 355 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 NUTM1Q86Y26 1132 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 NEK1Q96PY6 1258 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 CHMLP26374 656 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 DCTN1Q14203 1278 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 BRAPQ7Z569 592 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 RBM27Q9P2N5 1060 aaKnown RBP9.43□□□□□ -0.9
NUP98-202ENST00000355260 HELLSQ9NRZ9 838 aa9.43□□□□□ -0.9
NUP98-202ENST00000355260 SNRPA1P09661 255 aaKnown RBP9.42□□□□□ -0.9
NUP98-202ENST00000355260 FOXD4L6Q3SYB3 417 aaPredicted RBP9.42□□□□□ -0.9
NUP98-202ENST00000355260 FOXD4L3Q6VB84 417 aaPredicted RBP9.42□□□□□ -0.9
NUP98-202ENST00000355260 CNNM2Q9H8M5 875 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms