RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CDC5LQ99459 802 aaKnown RBP15.32■□□□□ 0.04
SCN8A-202ENST00000355133 IQGAP2Q13576 1575 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 WDHD1O75717 1129 aaPredicted RBP15.32■□□□□ 0.04
SCN8A-202ENST00000355133 TMEM67Q5HYA8 995 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 FEZ1Q99689 392 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 TOP1P11387 765 aaKnown RBP15.32■□□□□ 0.04
SCN8A-202ENST00000355133 UBXN4Q92575 508 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 TTC21BQ7Z4L5 1316 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 FBLN1P23142 703 aa15.32■□□□□ 0.04
SCN8A-202ENST00000355133 CALRP27797 417 aaKnown RBP15.32■□□□□ 0.04
SCN8A-202ENST00000355133 FSIP1Q8NA03 581 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 LRPPRCP42704 1394 aaKnown RBP15.31■□□□□ 0.04
SCN8A-202ENST00000355133 GOLGA6L7A0A1B0GV03 622 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
SCN8A-202ENST00000355133 PPP1R42Q7Z4L9 355 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 USP16Q9Y5T5 823 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 ESPNB1AK53 854 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 GJB2P29033 226 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 TEX13AQ9BXU3 409 aaPredicted RBP15.31■□□□□ 0.04
SCN8A-202ENST00000355133 PANK2Q9BZ23 570 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 TFIP11Q9UBB9 837 aaKnown RBP15.31■□□□□ 0.04
SCN8A-202ENST00000355133 ACEP12821 1306 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 TSPY2A6NKD2 308 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 TMX1Q9H3N1 280 aa15.31■□□□□ 0.04
SCN8A-202ENST00000355133 NUP88Q99567 741 aaPredicted RBP15.3■□□□□ 0.04
SCN8A-202ENST00000355133 EHMT1Q9H9B1 1298 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 GDPD2Q9HCC8 539 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 RFC4P35249 363 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 CCDC97Q96F63 343 aaPredicted RBP15.3■□□□□ 0.04
SCN8A-202ENST00000355133 PCF11O94913 1555 aaKnown RBP15.3■□□□□ 0.04
SCN8A-202ENST00000355133 BIN1O00499 593 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 CCDC178Q5BJE1 867 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 MICU3Q86XE3 530 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCN8A-202ENST00000355133 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.3■□□□□ 0.04
SCN8A-202ENST00000355133 KIF14Q15058 1648 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 BAG4O95429 457 aaKnown RBP15.3■□□□□ 0.04
SCN8A-202ENST00000355133 ZSCAN12O43309 604 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 PTPN14Q15678 1187 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 KAT14Q9H8E8 782 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 CLIP2Q9UDT6 1046 aa15.3■□□□□ 0.04
SCN8A-202ENST00000355133 CASQ1P31415 396 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 IARSP41252 1262 aaKnown RBP15.29■□□□□ 0.04
SCN8A-202ENST00000355133 TDRD12Q587J7 1177 aaKnown RBP15.29■□□□□ 0.04
SCN8A-202ENST00000355133 VPS36Q86VN1 386 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 PTPN23Q9H3S7 1636 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 KIF5CO60282 957 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 DNAI2Q9GZS0 605 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 CCDC113Q9H0I3 377 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 TNNT1P13805 278 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 MFSD6Q6ZSS7 791 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 FGFR1OPO95684 399 aaKnown RBP15.29■□□□□ 0.04
SCN8A-202ENST00000355133 LDHCP07864 332 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 ANAPC15P60006 121 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 SPTY2D1Q68D10 685 aaPredicted RBP15.29■□□□□ 0.04
SCN8A-202ENST00000355133 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
SCN8A-202ENST00000355133 BAG3O95817 575 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 PDE4BQ07343 736 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 TBC1D9Q6ZT07 1266 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 CTNNBL1Q8WYA6 563 aaPredicted RBP15.28■□□□□ 0.04
SCN8A-202ENST00000355133 SNRPA1P09661 255 aaKnown RBP15.28■□□□□ 0.04
SCN8A-202ENST00000355133 PRKCSHP14314 528 aaPredicted RBP15.28■□□□□ 0.04
SCN8A-202ENST00000355133 IDEP14735 1019 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 KIF4BQ2VIQ3 1234 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 MACROD2A1Z1Q3 448 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 PIK3R4Q99570 1358 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 CABP5Q9NP86 173 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 CCDC150Q8NCX0 1101 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 SLC26A6Q9BXS9 759 aa15.28■□□□□ 0.04
SCN8A-202ENST00000355133 URI1O94763 535 aaPredicted RBP15.27■□□□□ 0.04
SCN8A-202ENST00000355133 KIF5BP33176 963 aa15.27■□□□□ 0.04
SCN8A-202ENST00000355133 MTIF2P46199 727 aaKnown RBP15.27■□□□□ 0.04
SCN8A-202ENST00000355133 CALML4Q96GE6 196 aa15.27■□□□□ 0.04
SCN8A-202ENST00000355133 METAP2P50579 478 aaKnown RBP eCLIP15.27■□□□□ 0.04
SCN8A-202ENST00000355133 NBPF6Q5VWK0 638 aa15.27■□□□□ 0.04
SCN8A-202ENST00000355133 NBPF5PQ86XG9 351 aaPredicted RBP15.27■□□□□ 0.04
SCN8A-202ENST00000355133 NBPF4Q96M43 638 aa15.27■□□□□ 0.04
SCN8A-202ENST00000355133 CRACR2AQ9BSW2 395 aa15.27■□□□□ 0.04
SCN8A-202ENST00000355133 ISM2Q6H9L7 571 aa15.27■□□□□ 0.03
SCN8A-202ENST00000355133 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.03
SCN8A-202ENST00000355133 ACSBG1Q96GR2 724 aa15.27■□□□□ 0.03
SCN8A-202ENST00000355133 TCERG1LQ5VWI1 586 aa15.27■□□□□ 0.03
SCN8A-202ENST00000355133 NEK1Q96PY6 1258 aa15.27■□□□□ 0.03
SCN8A-202ENST00000355133 TBC1D2Q9BYX2 928 aa15.27■□□□□ 0.03
SCN8A-202ENST00000355133 ORC3Q9UBD5 711 aaPredicted RBP15.27■□□□□ 0.03
SCN8A-202ENST00000355133 CCDC12Q8WUD4 166 aaPredicted RBP15.27■□□□□ 0.03
SCN8A-202ENST00000355133 TCP11L1Q9NUJ3 509 aa15.27■□□□□ 0.03
SCN8A-202ENST00000355133 KIF20AO95235 890 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 HLA-DOAP06340 250 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 LUZP1Q86V48 1076 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 SAMM50Q9Y512 469 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 USP8P40818 1118 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 ANKRD13DQ6ZTN6 518 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 C14orf93Q9H972 538 aaKnown RBP15.26■□□□□ 0.03
SCN8A-202ENST00000355133 GOPCQ9HD26 462 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 SCAF11Q99590 1463 aaKnown RBP15.26■□□□□ 0.03
SCN8A-202ENST00000355133 CTAGE5O15320 804 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 NCOA7Q8NI08 942 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 CCDC40Q4G0X9 1142 aa15.26■□□□□ 0.03
SCN8A-202ENST00000355133 ZSCAN30Q86W11 494 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms