RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 TDO2P48775 406 aa14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 EIF4A1P60842 406 aaKnown RBP14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 PIBF1Q8WXW3 757 aa14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 PNMA6EA0A0J9YXQ4 647 aa14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 RFC4P35249 363 aa14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 TTC22Q5TAA0 569 aa14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 AXIN2Q9Y2T1 843 aa14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 HSP90AB3PQ58FF7 597 aa14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 FERMT3Q86UX7 667 aa14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 BICC1Q9H694 974 aaKnown RBP14.75□□□□□ -0.05
PCDHB11-201ENST00000354757 KCNQ4P56696 695 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 RNF214Q8ND24 703 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 TBC1D2Q9BYX2 928 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 INSRP06213 1382 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 RBM5P52756 815 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 HAND2P61296 217 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 CSPP1Q1MSJ5 1256 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 NCBP3Q53F19 620 aaKnown RBP14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 PPRC1Q5VV67 1664 aaKnown RBP14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 TRPM1Q7Z4N2 1603 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 MINDY4BA8MYZ0 360 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 NBPF5PQ86XG9 351 aaPredicted RBP14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 NUP133Q8WUM0 1156 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 AIDAQ96BJ3 306 aa14.74□□□□□ -0.05
PCDHB11-201ENST00000354757 CCDC82Q8N4S0 544 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 KIDINS220Q9ULH0 1771 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 PTMSP20962 102 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 DCTPP1Q9H773 170 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 ALKQ9UM73 1620 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 PROSER3Q2NL68 480 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 C8orf34Q49A92 452 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 SMC5Q8IY18 1101 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 PDRG1Q9NUG6 133 aa14.73□□□□□ -0.05
PCDHB11-201ENST00000354757 PHKG2P15735 406 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 CAVIN1Q6NZI2 390 aaKnown RBP14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 BRINP3Q76B58 766 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 AKAP2Q9Y2D5 859 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 FAM135BQ49AJ0 1406 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 ABCA6Q8N139 1617 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 ALDH1L1O75891 902 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 RAB11FIP4Q86YS3 637 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 ARHGEF10O15013 1369 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 HCLS1P14317 486 aaPredicted RBP14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 CCDC83Q8IWF9 413 aa14.72□□□□□ -0.05
PCDHB11-201ENST00000354757 TIMM10P62072 90 aa14.71□□□□□ -0.05
PCDHB11-201ENST00000354757 ZNF594Q96JF6 807 aaPredicted RBP14.71□□□□□ -0.05
PCDHB11-201ENST00000354757 C6orf229H3BNL8 230 aa14.71□□□□□ -0.05
PCDHB11-201ENST00000354757 GIGYF1O75420 1035 aaPredicted RBP14.71□□□□□ -0.05
PCDHB11-201ENST00000354757 IGSF1Q8N6C5 1336 aa14.71□□□□□ -0.05
PCDHB11-201ENST00000354757 TRAK2O60296 914 aa14.71□□□□□ -0.06
PCDHB11-201ENST00000354757 JAG2Q9Y219 1238 aa14.71□□□□□ -0.06
PCDHB11-201ENST00000354757 ERBB3P21860 1342 aa14.71□□□□□ -0.06
PCDHB11-201ENST00000354757 ZNF521Q96K83 1311 aa14.71□□□□□ -0.06
PCDHB11-201ENST00000354757 SYNMO15061 1565 aa14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 DTNBO60941 627 aa14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 IKQ13123 557 aaPredicted RBP14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 GLI2P10070 1586 aa14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 MADDQ8WXG6 1647 aa14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 INO80Q9ULG1 1556 aaPredicted RBP14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 SART3Q15020 963 aaKnown RBP14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 NACAP1Q9BZK3 213 aa14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 ATP7BP35670 1465 aa14.7□□□□□ -0.06
PCDHB11-201ENST00000354757 GNPATO15228 680 aa14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 CAVIN4Q5BKX8 364 aa14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 PLEKHM2Q8IWE5 1019 aa14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 ASAP1Q9ULH1 1129 aa14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 PES1O00541 588 aaKnown RBP14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 LARP1BQ659C4 914 aaKnown RBP14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 TTLL7Q6ZT98 887 aa14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 ZSCAN29Q8IWY8 852 aaPredicted RBP14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 LRRC2Q9BYS8 371 aa14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 ADGRB3O60242 1522 aa14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 IRS4O14654 1257 aaPredicted RBP14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 FAM13BQ9NYF5 915 aa14.69□□□□□ -0.06
PCDHB11-201ENST00000354757 GOLGA6L6A8MZA4 724 aa14.68□□□□□ -0.06
PCDHB11-201ENST00000354757 TFCP2Q12800 502 aa14.68□□□□□ -0.06
PCDHB11-201ENST00000354757 RPGRQ92834 1020 aaKnown RBP14.68□□□□□ -0.06
PCDHB11-201ENST00000354757 AATKQ6ZMQ8 1374 aa14.68□□□□□ -0.06
PCDHB11-201ENST00000354757 SETDB2Q96T68 719 aa14.68□□□□□ -0.06
PCDHB11-201ENST00000354757 USP21Q9UK80 565 aa14.68□□□□□ -0.06
PCDHB11-201ENST00000354757 MCM2P49736 904 aa14.68□□□□□ -0.06
PCDHB11-201ENST00000354757 RNF123Q5XPI4 1314 aa14.68□□□□□ -0.06
PCDHB11-201ENST00000354757 ATP2B3Q16720 1220 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 SUCLG2Q96I99 432 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 TBC1D32Q96NH3 1257 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 BECN2A8MW95 431 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 SAFBQ15424 915 aaKnown RBP eCLIP14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 CLTCQ00610 1675 aaKnown RBP14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 NRDCO43847 1150 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 SLC5A1P13866 664 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 GUCY1B3Q02153 619 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 EVI5LQ96CN4 794 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 USP44Q9H0E7 712 aa14.67□□□□□ -0.06
PCDHB11-201ENST00000354757 SOS1Q07889 1333 aaPredicted RBP14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 SKOR2Q2VWA4 1001 aaPredicted RBP14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 ZNF622Q969S3 477 aaKnown RBP eCLIP14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 NAPBQ9H115 298 aa14.66□□□□□ -0.06
PCDHB11-201ENST00000354757 ZSCAN25Q6NSZ9 544 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms