RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 NPATQ14207 1427 aa14.34□□□□□ -0.11
TRPM3-201ENST00000354500 RAB3GAP1Q15042 981 aa14.34□□□□□ -0.11
TRPM3-201ENST00000354500 C8orf76Q96K31 380 aa14.34□□□□□ -0.11
TRPM3-201ENST00000354500 TTC12Q9H892 705 aaPredicted RBP14.34□□□□□ -0.11
TRPM3-201ENST00000354500 IQSEC3Q9UPP2 1182 aaPredicted RBP14.34□□□□□ -0.11
TRPM3-201ENST00000354500 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
TRPM3-201ENST00000354500 CFAP100Q494V2 611 aa14.33□□□□□ -0.11
TRPM3-201ENST00000354500 LDHAL6AQ6ZMR3 332 aa14.33□□□□□ -0.11
TRPM3-201ENST00000354500 CTDP1Q9Y5B0 961 aaPredicted RBP14.33□□□□□ -0.11
TRPM3-201ENST00000354500 MSH6P52701 1360 aa14.33□□□□□ -0.12
TRPM3-201ENST00000354500 STARD3NLO95772 234 aa14.33□□□□□ -0.12
TRPM3-201ENST00000354500 LGR6Q9HBX8 967 aa14.33□□□□□ -0.12
TRPM3-201ENST00000354500 NDUFB9Q9Y6M9 179 aa14.33□□□□□ -0.12
TRPM3-201ENST00000354500 ADGRL2O95490 1459 aa14.33□□□□□ -0.12
TRPM3-201ENST00000354500 SHANK2Q9UPX8 1470 aa14.33□□□□□ -0.12
TRPM3-201ENST00000354500 GRM8O00222 908 aa14.33□□□□□ -0.12
TRPM3-201ENST00000354500 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
TRPM3-201ENST00000354500 YTHDC2Q9H6S0 1430 aaKnown RBP14.32□□□□□ -0.12
TRPM3-201ENST00000354500 ZNF518AQ6AHZ1 1483 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 CHMLP26374 656 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 HSP90AA4PQ58FG1 418 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 MICU3Q86XE3 530 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 IFNL2Q8IZJ0 200 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 GOLGA8BA8MQT2 603 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 AK2P54819 239 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 CADPS2Q86UW7 1296 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 FSIP1Q8NA03 581 aa14.32□□□□□ -0.12
TRPM3-201ENST00000354500 ZSCAN22P10073 491 aaPredicted RBP14.31□□□□□ -0.12
TRPM3-201ENST00000354500 ZNF165P49910 485 aa14.31□□□□□ -0.12
TRPM3-201ENST00000354500 UHRF1BP1LA0JNW5 1464 aa14.31□□□□□ -0.12
TRPM3-201ENST00000354500 EIF4G3O43432 1585 aaKnown RBP14.31□□□□□ -0.12
TRPM3-201ENST00000354500 NAPBQ9H115 298 aa14.31□□□□□ -0.12
TRPM3-201ENST00000354500 TMX1Q9H3N1 280 aa14.31□□□□□ -0.12
TRPM3-201ENST00000354500 ZNF213O14771 459 aa14.31□□□□□ -0.12
TRPM3-201ENST00000354500 NBPF7P0C2Y1 421 aaPredicted RBP14.31□□□□□ -0.12
TRPM3-201ENST00000354500 CEP89Q96ST8 783 aa14.31□□□□□ -0.12
TRPM3-201ENST00000354500 USP16Q9Y5T5 823 aa14.31□□□□□ -0.12
TRPM3-201ENST00000354500 ZMYM4Q5VZL5 1548 aa14.3□□□□□ -0.12
TRPM3-201ENST00000354500 NMIQ13287 307 aaPredicted RBP14.3□□□□□ -0.12
TRPM3-201ENST00000354500 DHX8Q14562 1220 aaKnown RBP14.3□□□□□ -0.12
TRPM3-201ENST00000354500 EXOC5O00471 708 aa14.3□□□□□ -0.12
TRPM3-201ENST00000354500 RRAGDQ9NQL2 400 aaPredicted RBP14.3□□□□□ -0.12
TRPM3-201ENST00000354500 GNL3LQ9NVN8 582 aaKnown RBP14.3□□□□□ -0.12
TRPM3-201ENST00000354500 KSR2Q6VAB6 950 aa14.3□□□□□ -0.12
TRPM3-201ENST00000354500 ZHX3Q9H4I2 956 aa14.3□□□□□ -0.12
TRPM3-201ENST00000354500 ARGLU1Q9NWB6 273 aaPredicted RBP14.3□□□□□ -0.12
TRPM3-201ENST00000354500 BLMP54132 1417 aaPredicted RBP14.3□□□□□ -0.12
TRPM3-201ENST00000354500 SAMD9Q5K651 1589 aa14.3□□□□□ -0.12
TRPM3-201ENST00000354500 LRSAM1Q6UWE0 723 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 DACT1Q9NYF0 836 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 SNRPA1P09661 255 aaKnown RBP14.29□□□□□ -0.12
TRPM3-201ENST00000354500 CBX1P83916 185 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 ORC3Q9UBD5 711 aaPredicted RBP14.29□□□□□ -0.12
TRPM3-201ENST00000354500 CLIP2Q9UDT6 1046 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 CHL1O00533 1208 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 OFD1O75665 1012 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 GCP02774 474 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 UBE2HP62256 183 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 GPS2Q13227 327 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 MAP7D2Q96T17 732 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 TCEAL9Q9UHQ7 104 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 NPC1L1Q9UHC9 1359 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 RANBP6O60518 1105 aaKnown RBP14.29□□□□□ -0.12
TRPM3-201ENST00000354500 ZSCAN25Q6NSZ9 544 aa14.29□□□□□ -0.12
TRPM3-201ENST00000354500 MBD5Q9P267 1494 aa14.28□□□□□ -0.12
TRPM3-201ENST00000354500 HOXC9P31274 260 aa14.28□□□□□ -0.12
TRPM3-201ENST00000354500 PKP1Q13835 747 aa14.28□□□□□ -0.12
TRPM3-201ENST00000354500 FILIP1LQ4L180 1135 aa14.28□□□□□ -0.12
TRPM3-201ENST00000354500 SSBP05455 408 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRPM3-201ENST00000354500 IGHMBP2P38935 993 aaKnown RBP14.28□□□□□ -0.12
TRPM3-201ENST00000354500 RBM25P49756 843 aaKnown RBP14.28□□□□□ -0.12
TRPM3-201ENST00000354500 HELBQ8NG08 1087 aaPredicted RBP14.28□□□□□ -0.12
TRPM3-201ENST00000354500 PUS7Q96PZ0 661 aaKnown RBP14.28□□□□□ -0.12
TRPM3-201ENST00000354500 CWC25Q9NXE8 425 aaPredicted RBP14.28□□□□□ -0.12
TRPM3-201ENST00000354500 ABCC1P33527 1531 aa14.28□□□□□ -0.12
TRPM3-201ENST00000354500 FLT4P35916 1363 aa14.27□□□□□ -0.12
TRPM3-201ENST00000354500 IFIT3O14879 490 aaKnown RBP14.27□□□□□ -0.12
TRPM3-201ENST00000354500 CPLX3Q8WVH0 158 aa14.27□□□□□ -0.12
TRPM3-201ENST00000354500 ZBTB9Q96C00 473 aa14.27□□□□□ -0.12
TRPM3-201ENST00000354500 ORAI2Q96SN7 254 aa14.27□□□□□ -0.12
TRPM3-201ENST00000354500 TIMM10P62072 90 aa14.27□□□□□ -0.12
TRPM3-201ENST00000354500 ZNF219Q9P2Y4 722 aaPredicted RBP14.27□□□□□ -0.12
TRPM3-201ENST00000354500 AKAP2Q9Y2D5 859 aa14.27□□□□□ -0.12
TRPM3-201ENST00000354500 SF3B2Q13435 895 aaKnown RBP14.27□□□□□ -0.13
TRPM3-201ENST00000354500 CAGE1Q8TC20 777 aa14.27□□□□□ -0.13
TRPM3-201ENST00000354500 ACSBG1Q96GR2 724 aa14.27□□□□□ -0.13
TRPM3-201ENST00000354500 SOS1Q07889 1333 aaPredicted RBP14.27□□□□□ -0.13
TRPM3-201ENST00000354500 GSPT1P15170 499 aaKnown RBP14.27□□□□□ -0.13
TRPM3-201ENST00000354500 RBM5P52756 815 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRPM3-201ENST00000354500 KCNQ3O43525 872 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 TTC21AQ8NDW8 1320 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 ZMYM3Q14202 1370 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 CDKL5O76039 1030 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 SYT1P21579 422 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 SFPQP23246 707 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRPM3-201ENST00000354500 CCDC70Q6NSX1 233 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 Q6ZUG5 572 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 PPFIBP1Q86W92 1011 aa14.26□□□□□ -0.13
TRPM3-201ENST00000354500 CCAR1Q8IX12 1150 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms